RNA–Protein interactions for RNA: ENST00000447632.6

TTC39A-212, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-212ENST00000447632 KCNQ3O43525 872 aa11.11□□□□□ -0.63
TTC39A-212ENST00000447632 KCNQ4P56696 695 aa11.11□□□□□ -0.63
TTC39A-212ENST00000447632 MAP3K5Q99683 1374 aa11.1□□□□□ -0.63
TTC39A-212ENST00000447632 ELL2O00472 640 aaPredicted RBP11.1□□□□□ -0.63
TTC39A-212ENST00000447632 NPM2Q86SE8 214 aaKnown RBP11.1□□□□□ -0.63
TTC39A-212ENST00000447632 PIGBQ92521 554 aa11.1□□□□□ -0.63
TTC39A-212ENST00000447632 RGS12O14924 1447 aa11.1□□□□□ -0.63
TTC39A-212ENST00000447632 RGPD1P0DJD0 1748 aa11.1□□□□□ -0.63
TTC39A-212ENST00000447632 FAM208AQ9UK61 1670 aaKnown RBP11.1□□□□□ -0.63
TTC39A-212ENST00000447632 TCERG1O14776 1098 aaKnown RBP11.1□□□□□ -0.63
TTC39A-212ENST00000447632 PTCD1O75127 700 aaKnown RBP11.1□□□□□ -0.63
TTC39A-212ENST00000447632 PDE4AP27815 886 aa11.1□□□□□ -0.63
TTC39A-212ENST00000447632 TSR2Q969E8 191 aaKnown RBP11.1□□□□□ -0.63
TTC39A-212ENST00000447632 HSP90AB1P08238 724 aaKnown RBP11.09□□□□□ -0.63
TTC39A-212ENST00000447632 TMOD3Q9NYL9 352 aa11.09□□□□□ -0.63
TTC39A-212ENST00000447632 ASAP1Q9ULH1 1129 aa11.09□□□□□ -0.63
TTC39A-212ENST00000447632 BTBD11A6QL63 1104 aa11.09□□□□□ -0.63
TTC39A-212ENST00000447632 PLIN1O60240 522 aa11.09□□□□□ -0.63
TTC39A-212ENST00000447632 NKX1-1Q15270 411 aaPredicted RBP11.09□□□□□ -0.63
TTC39A-212ENST00000447632 FAM196AQ6ZSG2 479 aa11.09□□□□□ -0.63
TTC39A-212ENST00000447632 SLC52A2Q9HAB3 445 aa11.08□□□□□ -0.64
TTC39A-212ENST00000447632 LMOD3Q0VAK6 560 aa11.08□□□□□ -0.64
TTC39A-212ENST00000447632 TAF7Q15545 349 aaPredicted RBP11.08□□□□□ -0.64
TTC39A-212ENST00000447632 KRT24Q2M2I5 525 aa11.08□□□□□ -0.64
TTC39A-212ENST00000447632 BACH2Q9BYV9 841 aa11.08□□□□□ -0.64
TTC39A-212ENST00000447632 TNS2Q63HR2 1409 aa11.07□□□□□ -0.64
TTC39A-212ENST00000447632 SKAP1Q86WV1 359 aa11.07□□□□□ -0.64
TTC39A-212ENST00000447632 RBM42Q9BTD8 480 aaKnown RBP11.07□□□□□ -0.64
TTC39A-212ENST00000447632 KDM6AO15550 1401 aaPredicted RBP11.07□□□□□ -0.64
TTC39A-212ENST00000447632 TSPYL4Q9UJ04 414 aa11.07□□□□□ -0.64
TTC39A-212ENST00000447632 ERVV-2B6SEH9 535 aa11.06□□□□□ -0.64
TTC39A-212ENST00000447632 HTATSF1O43719 755 aaKnown RBP11.06□□□□□ -0.64
TTC39A-212ENST00000447632 GOLGA2Q08379 1002 aa11.06□□□□□ -0.64
TTC39A-212ENST00000447632 RTL5Q5HYW3 569 aaPredicted RBP11.06□□□□□ -0.64
TTC39A-212ENST00000447632 NECTIN2Q92692 538 aa11.06□□□□□ -0.64
TTC39A-212ENST00000447632 APBA3O96018 575 aa11.05□□□□□ -0.64
TTC39A-212ENST00000447632 MBIPQ9NS73 344 aa11.05□□□□□ -0.64
TTC39A-212ENST00000447632 CCDC27Q2M243 656 aa11.05□□□□□ -0.64
TTC39A-212ENST00000447632 PRAMEF22A3QJZ6 481 aa11.05□□□□□ -0.64
TTC39A-212ENST00000447632 MS4A1P11836 297 aa11.05□□□□□ -0.64
TTC39A-212ENST00000447632 ATG3Q9NT62 314 aa11.05□□□□□ -0.64
TTC39A-212ENST00000447632 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.04□□□□□ -0.64
TTC39A-212ENST00000447632 WDR63Q8IWG1 891 aa11.04□□□□□ -0.64
TTC39A-212ENST00000447632 TTC5Q8N0Z6 440 aa11.04□□□□□ -0.64
TTC39A-212ENST00000447632 CFAP44Q96MT7 982 aa11.04□□□□□ -0.64
TTC39A-212ENST00000447632 CRBNQ96SW2 442 aa11.04□□□□□ -0.64
TTC39A-212ENST00000447632 ZNF790Q6PG37 636 aa11.04□□□□□ -0.64
TTC39A-212ENST00000447632 DEFB132Q7Z7B7 95 aa11.04□□□□□ -0.64
TTC39A-212ENST00000447632 ZNF496Q96IT1 587 aaPredicted RBP11.04□□□□□ -0.64
TTC39A-212ENST00000447632 CEMIPQ8WUJ3 1361 aa11.03□□□□□ -0.64
TTC39A-212ENST00000447632 CHL1O00533 1208 aa11.03□□□□□ -0.64
TTC39A-212ENST00000447632 BCL11BQ9C0K0 894 aaPredicted RBP11.03□□□□□ -0.64
TTC39A-212ENST00000447632 ZNF521Q96K83 1311 aa11.03□□□□□ -0.64
TTC39A-212ENST00000447632 GNAI1P63096 354 aa11.03□□□□□ -0.64
TTC39A-212ENST00000447632 TSPYL6Q8N831 410 aa11.03□□□□□ -0.64
TTC39A-212ENST00000447632 EIF2S2P20042 333 aaKnown RBP11.02□□□□□ -0.64
TTC39A-212ENST00000447632 PIP4K2AP48426 406 aaPredicted RBP11.02□□□□□ -0.64
TTC39A-212ENST00000447632 EN1Q05925 392 aaPredicted RBP11.02□□□□□ -0.64
TTC39A-212ENST00000447632 EXOSC9Q06265 439 aaKnown RBP11.02□□□□□ -0.64
TTC39A-212ENST00000447632 SLFN5Q08AF3 891 aa11.02□□□□□ -0.64
TTC39A-212ENST00000447632 C20orf194Q5TEA3 1177 aa11.02□□□□□ -0.64
TTC39A-212ENST00000447632 C8orf58Q8NAV2 365 aa11.02□□□□□ -0.64
TTC39A-212ENST00000447632 CALD1Q05682 793 aaKnown RBP11.02□□□□□ -0.65
TTC39A-212ENST00000447632 LRRC37A3O60309 1634 aa11.01□□□□□ -0.65
TTC39A-212ENST00000447632 IFT57Q9NWB7 429 aa11.01□□□□□ -0.65
TTC39A-212ENST00000447632 ZNF853P0CG23 659 aa11.01□□□□□ -0.65
TTC39A-212ENST00000447632 SF3B2Q13435 895 aaKnown RBP11.01□□□□□ -0.65
TTC39A-212ENST00000447632 SMIM5Q71RC9 77 aa11.01□□□□□ -0.65
TTC39A-212ENST00000447632 SLC4A9Q96Q91 983 aa11.01□□□□□ -0.65
TTC39A-212ENST00000447632 THSD7AQ9UPZ6 1657 aa11.01□□□□□ -0.65
TTC39A-212ENST00000447632 E9PSI1 815 aa11□□□□□ -0.65
TTC39A-212ENST00000447632 ATP6V1AP38606 617 aa11□□□□□ -0.65
TTC39A-212ENST00000447632 NGEFQ8N5V2 710 aa11□□□□□ -0.65
TTC39A-212ENST00000447632 USP16Q9Y5T5 823 aa11□□□□□ -0.65
TTC39A-212ENST00000447632 EIF4A1P60842 406 aaKnown RBP11□□□□□ -0.65
TTC39A-212ENST00000447632 MYH16Q9H6N6 1097 aa11□□□□□ -0.65
TTC39A-212ENST00000447632 BCL9O00512 1426 aa11□□□□□ -0.65
TTC39A-212ENST00000447632 PARP4Q9UKK3 1724 aaKnown RBP11□□□□□ -0.65
TTC39A-212ENST00000447632 DUSP27Q5VZP5 1158 aa10.99□□□□□ -0.65
TTC39A-212ENST00000447632 ZNF330Q9Y3S2 320 aaPredicted RBP10.99□□□□□ -0.65
TTC39A-212ENST00000447632 LOC102724428A0A0B4J2F2 783 aa10.99□□□□□ -0.65
TTC39A-212ENST00000447632 SIK1P57059 783 aa10.99□□□□□ -0.65
TTC39A-212ENST00000447632 EZH2Q15910 746 aaKnown RBP10.99□□□□□ -0.65
TTC39A-212ENST00000447632 DNAJC10Q8IXB1 793 aa10.99□□□□□ -0.65
TTC39A-212ENST00000447632 PROM2Q8N271 834 aa10.99□□□□□ -0.65
TTC39A-212ENST00000447632 ARXQ96QS3 562 aa10.99□□□□□ -0.65
TTC39A-212ENST00000447632 BCL2L13Q9BXK5 485 aa10.99□□□□□ -0.65
TTC39A-212ENST00000447632 SRCAPQ6ZRS2 3230 aa10.99□□□□□ -0.65
TTC39A-212ENST00000447632 BRWD3Q6RI45 1802 aa10.99□□□□□ -0.65
TTC39A-212ENST00000447632 ANXA1P04083 346 aa10.99□□□□□ -0.65
TTC39A-212ENST00000447632 FMNL2Q96PY5 1086 aa10.99□□□□□ -0.65
TTC39A-212ENST00000447632 LRRC4BQ9NT99 713 aa10.98□□□□□ -0.65
TTC39A-212ENST00000447632 CCNL1Q9UK58 526 aaPredicted RBP10.98□□□□□ -0.65
TTC39A-212ENST00000447632 PALLDQ8WX93 1383 aa10.98□□□□□ -0.65
TTC39A-212ENST00000447632 UBE2Q2Q8WVN8 375 aa10.98□□□□□ -0.65
TTC39A-212ENST00000447632 UPF1Q92900 1129 aaKnown RBP eCLIP10.98□□□□□ -0.65
TTC39A-212ENST00000447632 GIGYF1O75420 1035 aaPredicted RBP10.97□□□□□ -0.65
TTC39A-212ENST00000447632 A1BGP04217 495 aa10.97□□□□□ -0.65
TTC39A-212ENST00000447632 ITPK1Q13572 414 aa10.97□□□□□ -0.65
TTC39A-212ENST00000447632 TWISTNBQ3B726 338 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms