RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 RNMTO43148 476 aaKnown RBP15.84■□□□□ 0.13
RFC4-208ENST00000447345 NEFMP07197 916 aa15.84■□□□□ 0.13
RFC4-208ENST00000447345 WDR43Q15061 677 aaKnown RBP eCLIP15.84■□□□□ 0.13
RFC4-208ENST00000447345 MAPK8IP3Q9UPT6 1336 aa15.84■□□□□ 0.13
RFC4-208ENST00000447345 GNAT3A8MTJ3 354 aa15.83■□□□□ 0.12
RFC4-208ENST00000447345 NFATC2IPQ8NCF5 419 aa15.83■□□□□ 0.12
RFC4-208ENST00000447345 SMARCC1Q92922 1105 aaPredicted RBP15.83■□□□□ 0.12
RFC4-208ENST00000447345 ATG3Q9NT62 314 aa15.83■□□□□ 0.12
RFC4-208ENST00000447345 STK32BQ9NY57 414 aa15.83■□□□□ 0.12
RFC4-208ENST00000447345 ZNF831Q5JPB2 1677 aa15.83■□□□□ 0.12
RFC4-208ENST00000447345 UBR3Q6ZT12 1888 aa15.82■□□□□ 0.12
RFC4-208ENST00000447345 CCDC184Q52MB2 194 aa15.82■□□□□ 0.12
RFC4-208ENST00000447345 SLC27A3Q5K4L6 730 aa15.82■□□□□ 0.12
RFC4-208ENST00000447345 CCDC146Q8IYE0 955 aa15.82■□□□□ 0.12
RFC4-208ENST00000447345 SLC52A2Q9HAB3 445 aa15.82■□□□□ 0.12
RFC4-208ENST00000447345 ZNF827Q17R98 1081 aa15.81■□□□□ 0.12
RFC4-208ENST00000447345 PLEKHF1Q96S99 279 aa15.81■□□□□ 0.12
RFC4-208ENST00000447345 IL17REQ8NFR9 667 aa15.8■□□□□ 0.12
RFC4-208ENST00000447345 RBM42Q9BTD8 480 aaKnown RBP15.8■□□□□ 0.12
RFC4-208ENST00000447345 LRP5O75197 1615 aa15.79■□□□□ 0.12
RFC4-208ENST00000447345 CICQ96RK0 1608 aaPredicted RBP15.79■□□□□ 0.12
RFC4-208ENST00000447345 LOC102724428A0A0B4J2F2 783 aa15.79■□□□□ 0.12
RFC4-208ENST00000447345 SIK1P57059 783 aa15.79■□□□□ 0.12
RFC4-208ENST00000447345 TEFQ10587 303 aa15.79■□□□□ 0.12
RFC4-208ENST00000447345 DCTN1Q14203 1278 aa15.79■□□□□ 0.12
RFC4-208ENST00000447345 SLC15A2Q16348 729 aa15.79■□□□□ 0.12
RFC4-208ENST00000447345 MCM10Q7L590 875 aa15.79■□□□□ 0.12
RFC4-208ENST00000447345 RTF1Q92541 710 aaKnown RBP15.79■□□□□ 0.12
RFC4-208ENST00000447345 PNNQ9H307 717 aaKnown RBP15.79■□□□□ 0.12
RFC4-208ENST00000447345 KCPQ6ZWJ8 1503 aa15.78■□□□□ 0.12
RFC4-208ENST00000447345 MYH14Q7Z406 1995 aaKnown RBP15.78■□□□□ 0.12
RFC4-208ENST00000447345 KDM3BQ7LBC6 1761 aa15.78■□□□□ 0.12
RFC4-208ENST00000447345 PTCD1O75127 700 aaKnown RBP15.78■□□□□ 0.12
RFC4-208ENST00000447345 SLC39A6Q13433 755 aa15.78■□□□□ 0.12
RFC4-208ENST00000447345 MRS2Q9HD23 443 aa15.78■□□□□ 0.12
RFC4-208ENST00000447345 ADAMTS8Q9UP79 889 aa15.78■□□□□ 0.12
RFC4-208ENST00000447345 ATP6V1AP38606 617 aa15.77■□□□□ 0.12
RFC4-208ENST00000447345 NFE2L2Q16236 605 aa15.77■□□□□ 0.12
RFC4-208ENST00000447345 PDGFDQ9GZP0 370 aaPredicted RBP15.77■□□□□ 0.12
RFC4-208ENST00000447345 RRP7AQ9Y3A4 280 aaKnown RBP15.77■□□□□ 0.12
RFC4-208ENST00000447345 CEMIPQ8WUJ3 1361 aa15.76■□□□□ 0.11
RFC4-208ENST00000447345 ITPK1Q13572 414 aa15.76■□□□□ 0.11
RFC4-208ENST00000447345 LINC00116Q8NCU8 138 aa15.76■□□□□ 0.11
RFC4-208ENST00000447345 AKT1S1Q96B36 256 aa15.76■□□□□ 0.11
RFC4-208ENST00000447345 C4AP0C0L4 1744 aa15.76■□□□□ 0.11
RFC4-208ENST00000447345 SLC4A9Q96Q91 983 aa15.75■□□□□ 0.11
RFC4-208ENST00000447345 THUMPD2Q9BTF0 503 aaKnown RBP15.75■□□□□ 0.11
RFC4-208ENST00000447345 TFCP2L1Q9NZI6 479 aa15.75■□□□□ 0.11
RFC4-208ENST00000447345 NEUROD2Q15784 382 aa15.74■□□□□ 0.11
RFC4-208ENST00000447345 RUNDC1Q96C34 613 aa15.74■□□□□ 0.11
RFC4-208ENST00000447345 AK7Q96M32 723 aa15.74■□□□□ 0.11
RFC4-208ENST00000447345 LAMB4A4D0S4 1761 aa15.74■□□□□ 0.11
RFC4-208ENST00000447345 PNPLA7Q6ZV29 1317 aa15.73■□□□□ 0.11
RFC4-208ENST00000447345 TTC5Q8N0Z6 440 aa15.73■□□□□ 0.11
RFC4-208ENST00000447345 SENP3-EIF4A1A0A087X0R7 540 aa15.72■□□□□ 0.11
RFC4-208ENST00000447345 BTBD11A6QL63 1104 aa15.72■□□□□ 0.11
RFC4-208ENST00000447345 PHF14O94880 888 aa15.72■□□□□ 0.11
RFC4-208ENST00000447345 ZBTB7AO95365 584 aa15.72■□□□□ 0.11
RFC4-208ENST00000447345 TMPOP42166 694 aaKnown RBP15.72■□□□□ 0.11
RFC4-208ENST00000447345 RIPK4P57078 832 aa15.72■□□□□ 0.11
RFC4-208ENST00000447345 SMIM5Q71RC9 77 aa15.72■□□□□ 0.11
RFC4-208ENST00000447345 MSH5O43196 834 aa15.71■□□□□ 0.11
RFC4-208ENST00000447345 HTATSF1O43719 755 aaKnown RBP15.71■□□□□ 0.11
RFC4-208ENST00000447345 GNPATO15228 680 aa15.7■□□□□ 0.1
RFC4-208ENST00000447345 KCNQ3O43525 872 aa15.7■□□□□ 0.1
RFC4-208ENST00000447345 ZNF790Q6PG37 636 aa15.7■□□□□ 0.1
RFC4-208ENST00000447345 AMIGO3Q86WK7 504 aa15.7■□□□□ 0.1
RFC4-208ENST00000447345 COL24A1Q17RW2 1714 aa15.7■□□□□ 0.1
RFC4-208ENST00000447345 DNAJC10Q8IXB1 793 aa15.69■□□□□ 0.1
RFC4-208ENST00000447345 PNISRQ8TF01 805 aaKnown RBP15.69■□□□□ 0.1
RFC4-208ENST00000447345 ZNF496Q96IT1 587 aaPredicted RBP15.69■□□□□ 0.1
RFC4-208ENST00000447345 MIS18AQ9NYP9 233 aa15.69■□□□□ 0.1
RFC4-208ENST00000447345 HEG1Q9ULI3 1381 aa15.68■□□□□ 0.1
RFC4-208ENST00000447345 APAF1O14727 1248 aa15.68■□□□□ 0.1
RFC4-208ENST00000447345 LMOD3Q0VAK6 560 aa15.68■□□□□ 0.1
RFC4-208ENST00000447345 ATF5Q9Y2D1 282 aaPredicted RBP15.68■□□□□ 0.1
RFC4-208ENST00000447345 SRCAPQ6ZRS2 3230 aa15.68■□□□□ 0.1
RFC4-208ENST00000447345 CNTNAP4Q9C0A0 1308 aa15.68■□□□□ 0.1
RFC4-208ENST00000447345 COL23A1Q86Y22 540 aaPredicted RBP15.67■□□□□ 0.1
RFC4-208ENST00000447345 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.66■□□□□ 0.1
RFC4-208ENST00000447345 HMGB2P26583 209 aaKnown RBP15.66■□□□□ 0.1
RFC4-208ENST00000447345 CRKLP46109 303 aaKnown RBP15.66■□□□□ 0.1
RFC4-208ENST00000447345 TAF7Q15545 349 aaPredicted RBP15.66■□□□□ 0.1
RFC4-208ENST00000447345 FAM9BQ8IZU0 186 aa15.66■□□□□ 0.1
RFC4-208ENST00000447345 FMNL2Q96PY5 1086 aa15.66■□□□□ 0.1
RFC4-208ENST00000447345 SPON1Q9HCB6 807 aa15.66■□□□□ 0.1
RFC4-208ENST00000447345 MSL1Q68DK7 614 aa15.65■□□□□ 0.1
RFC4-208ENST00000447345 MTFR1LQ9H019 292 aa15.65■□□□□ 0.1
RFC4-208ENST00000447345 TRIM35Q9UPQ4 493 aa15.65■□□□□ 0.1
RFC4-208ENST00000447345 RTCBQ9Y3I0 505 aaKnown RBP15.65■□□□□ 0.1
RFC4-208ENST00000447345 SSFA2P28290 1259 aa15.64■□□□□ 0.09
RFC4-208ENST00000447345 DIEXFQ68CQ4 756 aaKnown RBP15.64■□□□□ 0.09
RFC4-208ENST00000447345 PRAMEF22A3QJZ6 481 aa15.63■□□□□ 0.09
RFC4-208ENST00000447345 CYP19A1P11511 503 aaPredicted RBP15.63■□□□□ 0.09
RFC4-208ENST00000447345 VSIG10Q8N0Z9 540 aa15.63■□□□□ 0.09
RFC4-208ENST00000447345 FLAD1Q8NFF5 587 aa15.63■□□□□ 0.09
RFC4-208ENST00000447345 CCDC87Q9NVE4 849 aa15.63■□□□□ 0.09
RFC4-208ENST00000447345 TSPYL4Q9UJ04 414 aa15.63■□□□□ 0.09
RFC4-208ENST00000447345 LAS1LQ9Y4W2 734 aaKnown RBP15.63■□□□□ 0.09
RFC4-208ENST00000447345 RC3H1Q5TC82 1133 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms