RNA–Protein interactions for RNA: ENST00000445268.5

RPE-213, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5 BASIC

Gene RPE, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-213ENST00000445268 CTCFP49711 727 aaPredicted RBP13.18□□□□□ -0.3
RPE-213ENST00000445268 LBX1P52954 281 aa13.18□□□□□ -0.3
RPE-213ENST00000445268 SMARCC1Q92922 1105 aaPredicted RBP13.18□□□□□ -0.3
RPE-213ENST00000445268 KDM6AO15550 1401 aaPredicted RBP13.18□□□□□ -0.3
RPE-213ENST00000445268 COL5A3P25940 1745 aaPredicted RBP13.18□□□□□ -0.3
RPE-213ENST00000445268 PCDH11XQ9BZA7 1347 aa13.17□□□□□ -0.3
RPE-213ENST00000445268 PCDH11YQ9BZA8 1340 aa13.17□□□□□ -0.3
RPE-213ENST00000445268 EDC4Q6P2E9 1401 aaKnown RBP13.17□□□□□ -0.3
RPE-213ENST00000445268 LOC102724428A0A0B4J2F2 783 aa13.17□□□□□ -0.3
RPE-213ENST00000445268 VEGFAP15692 232 aaPredicted RBP13.17□□□□□ -0.3
RPE-213ENST00000445268 SIK1P57059 783 aa13.17□□□□□ -0.3
RPE-213ENST00000445268 NBPF6Q5VWK0 638 aa13.17□□□□□ -0.3
RPE-213ENST00000445268 NBPF4Q96M43 638 aa13.17□□□□□ -0.3
RPE-213ENST00000445268 CNTNAP1P78357 1384 aa13.17□□□□□ -0.3
RPE-213ENST00000445268 DALRD3Q5D0E6 543 aaKnown RBP13.16□□□□□ -0.3
RPE-213ENST00000445268 PIGBQ92521 554 aa13.16□□□□□ -0.3
RPE-213ENST00000445268 AIDAQ96BJ3 306 aa13.16□□□□□ -0.3
RPE-213ENST00000445268 CREBZFQ9NS37 354 aa13.16□□□□□ -0.3
RPE-213ENST00000445268 PIM2Q9P1W9 311 aa13.16□□□□□ -0.3
RPE-213ENST00000445268 MYH14Q7Z406 1995 aaKnown RBP13.16□□□□□ -0.3
RPE-213ENST00000445268 CYP27B1O15528 508 aa13.15□□□□□ -0.3
RPE-213ENST00000445268 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
RPE-213ENST00000445268 CHRNA5P30532 468 aa13.15□□□□□ -0.3
RPE-213ENST00000445268 TMF1P82094 1093 aa13.15□□□□□ -0.3
RPE-213ENST00000445268 RAPGEF4Q8WZA2 1011 aa13.15□□□□□ -0.3
RPE-213ENST00000445268 GLTPD2A6NH11 291 aa13.14□□□□□ -0.31
RPE-213ENST00000445268 CCDC85CA6NKD9 419 aa13.14□□□□□ -0.31
RPE-213ENST00000445268 POTECB2RU33 542 aa13.14□□□□□ -0.31
RPE-213ENST00000445268 TNRC18O15417 2968 aaPredicted RBP13.14□□□□□ -0.31
RPE-213ENST00000445268 AMPHP49418 695 aa13.14□□□□□ -0.31
RPE-213ENST00000445268 A0A1W2PP64 1363 aa13.14□□□□□ -0.31
RPE-213ENST00000445268 DLEC1Q9Y238 1755 aa13.14□□□□□ -0.31
RPE-213ENST00000445268 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
RPE-213ENST00000445268 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
RPE-213ENST00000445268 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
RPE-213ENST00000445268 POTEJP0CG39 1038 aa13.13□□□□□ -0.31
RPE-213ENST00000445268 HSPA8P11142 646 aaKnown RBP13.13□□□□□ -0.31
RPE-213ENST00000445268 GYS1P13807 737 aa13.13□□□□□ -0.31
RPE-213ENST00000445268 TATP17735 454 aaPredicted RBP13.13□□□□□ -0.31
RPE-213ENST00000445268 PARP3Q9Y6F1 533 aa13.13□□□□□ -0.31
RPE-213ENST00000445268 DICER1Q9UPY3 1922 aaKnown RBP13.13□□□□□ -0.31
RPE-213ENST00000445268 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
RPE-213ENST00000445268 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
RPE-213ENST00000445268 ASAP1Q9ULH1 1129 aa13.12□□□□□ -0.31
RPE-213ENST00000445268 AFDNP55196 1824 aaKnown RBP13.11□□□□□ -0.31
RPE-213ENST00000445268 KDRP35968 1356 aa13.11□□□□□ -0.31
RPE-213ENST00000445268 VEGFBP49765 207 aa13.11□□□□□ -0.31
RPE-213ENST00000445268 TMC1Q8TDI8 760 aa13.11□□□□□ -0.31
RPE-213ENST00000445268 RTL1A6NKG5 1358 aa13.1□□□□□ -0.31
RPE-213ENST00000445268 RGS19P49795 217 aa13.1□□□□□ -0.31
RPE-213ENST00000445268 DDR1Q08345 913 aa13.1□□□□□ -0.31
RPE-213ENST00000445268 TRAPPC3LQ5T215 181 aa13.1□□□□□ -0.31
RPE-213ENST00000445268 ARHGEF1Q92888 912 aaKnown RBP13.1□□□□□ -0.31
RPE-213ENST00000445268 SLC12A5Q9H2X9 1139 aa13.1□□□□□ -0.31
RPE-213ENST00000445268 WBP1LQ9NX94 342 aa13.1□□□□□ -0.31
RPE-213ENST00000445268 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
RPE-213ENST00000445268 LMNB1P20700 586 aa13.09□□□□□ -0.31
RPE-213ENST00000445268 RRS1Q15050 365 aaKnown RBP13.09□□□□□ -0.31
RPE-213ENST00000445268 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
RPE-213ENST00000445268 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
RPE-213ENST00000445268 SMG6Q86US8 1419 aaKnown RBP13.09□□□□□ -0.31
RPE-213ENST00000445268 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.31
RPE-213ENST00000445268 SLC4A9Q96Q91 983 aa13.07□□□□□ -0.32
RPE-213ENST00000445268 TMOD3Q9NYL9 352 aa13.07□□□□□ -0.32
RPE-213ENST00000445268 SRP68Q9UHB9 627 aaKnown RBP13.07□□□□□ -0.32
RPE-213ENST00000445268 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
RPE-213ENST00000445268 THSD7BQ9C0I4 1608 aa13.06□□□□□ -0.32
RPE-213ENST00000445268 ADAMTS7Q9UKP4 1686 aa13.06□□□□□ -0.32
RPE-213ENST00000445268 RFC4P35249 363 aa13.06□□□□□ -0.32
RPE-213ENST00000445268 CFAP44Q96MT7 982 aa13.06□□□□□ -0.32
RPE-213ENST00000445268 ATG3Q9NT62 314 aa13.06□□□□□ -0.32
RPE-213ENST00000445268 PASKQ96RG2 1323 aa13.06□□□□□ -0.32
RPE-213ENST00000445268 NFKBIEO00221 500 aa13.05□□□□□ -0.32
RPE-213ENST00000445268 FKBP8Q14318 412 aa13.05□□□□□ -0.32
RPE-213ENST00000445268 COG3Q96JB2 828 aa13.05□□□□□ -0.32
RPE-213ENST00000445268 CACNA1SQ13698 1873 aa13.05□□□□□ -0.32
RPE-213ENST00000445268 FER1L6Q2WGJ9 1857 aa13.05□□□□□ -0.32
RPE-213ENST00000445268 ADRA2BP18089 450 aa13.04□□□□□ -0.32
RPE-213ENST00000445268 NRXN2Q9P2S2 1712 aa13.04□□□□□ -0.32
RPE-213ENST00000445268 TJP1Q07157 1748 aa13.03□□□□□ -0.32
RPE-213ENST00000445268 LTBP1Q14766 1721 aa13.03□□□□□ -0.32
RPE-213ENST00000445268 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
RPE-213ENST00000445268 CNTNAP4Q9C0A0 1308 aa13.03□□□□□ -0.32
RPE-213ENST00000445268 CASP8AP2Q9UKL3 1982 aa13.03□□□□□ -0.32
RPE-213ENST00000445268 COL11A2P13942 1736 aaPredicted RBP13.02□□□□□ -0.32
RPE-213ENST00000445268 RPS6KA4O75676 772 aa13.02□□□□□ -0.33
RPE-213ENST00000445268 HSP90AB2PQ58FF8 381 aa13.02□□□□□ -0.33
RPE-213ENST00000445268 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
RPE-213ENST00000445268 TERF2IPQ9NYB0 399 aa13.02□□□□□ -0.33
RPE-213ENST00000445268 USP42Q9H9J4 1324 aaKnown RBP13.02□□□□□ -0.33
RPE-213ENST00000445268 SCN4AP35499 1836 aa13.02□□□□□ -0.33
RPE-213ENST00000445268 KIF20BQ96Q89 1820 aa13.02□□□□□ -0.33
RPE-213ENST00000445268 TMEM88BA6NKF7 163 aa13.01□□□□□ -0.33
RPE-213ENST00000445268 POLRMTO00411 1230 aaKnown RBP13.01□□□□□ -0.33
RPE-213ENST00000445268 INSRP06213 1382 aa13.01□□□□□ -0.33
RPE-213ENST00000445268 ADAMTSL1Q8N6G6 1762 aa13.01□□□□□ -0.33
RPE-213ENST00000445268 ANKRD31Q8N7Z5 1873 aa13.01□□□□□ -0.33
RPE-213ENST00000445268 NCAPD2Q15021 1401 aa13□□□□□ -0.33
RPE-213ENST00000445268 DDNO94850 711 aaPredicted RBP13□□□□□ -0.33
RPE-213ENST00000445268 RC3H1Q5TC82 1133 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms