RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 FHDC1Q9C0D6 1143 aaPredicted RBP31.91■■■□□ 2.7
C9orf3-207ENST00000445181 DCAF8L1A6NGE4 600 aa31.9■■■□□ 2.7
C9orf3-207ENST00000445181 ERVV-2B6SEH9 535 aa31.9■■■□□ 2.7
C9orf3-207ENST00000445181 MSH5O43196 834 aa31.9■■■□□ 2.7
C9orf3-207ENST00000445181 ASAP1Q9ULH1 1129 aa31.9■■■□□ 2.7
C9orf3-207ENST00000445181 COL23A1Q86Y22 540 aaPredicted RBP31.89■■■□□ 2.7
C9orf3-207ENST00000445181 GAS2L2Q8NHY3 880 aa31.89■■■□□ 2.7
C9orf3-207ENST00000445181 KDM6AO15550 1401 aaPredicted RBP31.89■■■□□ 2.7
C9orf3-207ENST00000445181 C5P01031 1676 aa31.89■■■□□ 2.7
C9orf3-207ENST00000445181 CABP4P57796 275 aa31.88■■■□□ 2.69
C9orf3-207ENST00000445181 SYT17Q9BSW7 474 aa31.88■■■□□ 2.69
C9orf3-207ENST00000445181 LOC102724428A0A0B4J2F2 783 aa31.87■■■□□ 2.69
C9orf3-207ENST00000445181 SIK1P57059 783 aa31.87■■■□□ 2.69
C9orf3-207ENST00000445181 POLD1P28340 1107 aa31.86■■■□□ 2.69
C9orf3-207ENST00000445181 PHACTR3Q96KR7 559 aa31.86■■■□□ 2.69
C9orf3-207ENST00000445181 ATG3Q9NT62 314 aa31.86■■■□□ 2.69
C9orf3-207ENST00000445181 NEFMP07197 916 aa31.85■■■□□ 2.69
C9orf3-207ENST00000445181 TAF1LQ8IZX4 1826 aa31.84■■■□□ 2.69
C9orf3-207ENST00000445181 FLAD1Q8NFF5 587 aa31.83■■■□□ 2.69
C9orf3-207ENST00000445181 AK7Q96M32 723 aa31.83■■■□□ 2.69
C9orf3-207ENST00000445181 ANP32CO43423 234 aa31.82■■■□□ 2.68
C9orf3-207ENST00000445181 MAP3K5Q99683 1374 aa31.81■■■□□ 2.68
C9orf3-207ENST00000445181 GNAT3A8MTJ3 354 aa31.81■■■□□ 2.68
C9orf3-207ENST00000445181 RNMTO43148 476 aaKnown RBP31.81■■■□□ 2.68
C9orf3-207ENST00000445181 ATP6V1AP38606 617 aa31.81■■■□□ 2.68
C9orf3-207ENST00000445181 PNNQ9H307 717 aaKnown RBP31.81■■■□□ 2.68
C9orf3-207ENST00000445181 LGR6Q9HBX8 967 aa31.81■■■□□ 2.68
C9orf3-207ENST00000445181 C4BP0C0L5 1744 aa31.8■■■□□ 2.68
C9orf3-207ENST00000445181 NFATC2IPQ8NCF5 419 aa31.8■■■□□ 2.68
C9orf3-207ENST00000445181 LINC00116Q8NCU8 138 aa31.8■■■□□ 2.68
C9orf3-207ENST00000445181 SCN11AQ9UI33 1791 aa31.8■■■□□ 2.68
C9orf3-207ENST00000445181 ITPK1Q13572 414 aa31.79■■■□□ 2.68
C9orf3-207ENST00000445181 WDR43Q15061 677 aaKnown RBP eCLIP31.78■■■□□ 2.68
C9orf3-207ENST00000445181 COL24A1Q17RW2 1714 aa31.78■■■□□ 2.68
C9orf3-207ENST00000445181 MSL1Q68DK7 614 aa31.77■■■□□ 2.68
C9orf3-207ENST00000445181 KLHL34Q8N239 644 aa31.77■■■□□ 2.68
C9orf3-207ENST00000445181 SLC52A2Q9HAB3 445 aa31.77■■■□□ 2.68
C9orf3-207ENST00000445181 AMIGO3Q86WK7 504 aa31.76■■■□□ 2.67
C9orf3-207ENST00000445181 MAPK8IP3Q9UPT6 1336 aa31.75■■■□□ 2.67
C9orf3-207ENST00000445181 SMIM5Q71RC9 77 aa31.75■■■□□ 2.67
C9orf3-207ENST00000445181 RBM42Q9BTD8 480 aaKnown RBP31.75■■■□□ 2.67
C9orf3-207ENST00000445181 PHF14O94880 888 aa31.74■■■□□ 2.67
C9orf3-207ENST00000445181 VIRMAQ69YN4 1812 aaKnown RBP31.74■■■□□ 2.67
C9orf3-207ENST00000445181 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.73■■■□□ 2.67
C9orf3-207ENST00000445181 RTF1Q92541 710 aaKnown RBP31.73■■■□□ 2.67
C9orf3-207ENST00000445181 SLC4A9Q96Q91 983 aa31.72■■■□□ 2.67
C9orf3-207ENST00000445181 PLEKHF1Q96S99 279 aa31.72■■■□□ 2.67
C9orf3-207ENST00000445181 GNPATO15228 680 aa31.71■■■□□ 2.67
C9orf3-207ENST00000445181 SSFA2P28290 1259 aa31.71■■■□□ 2.67
C9orf3-207ENST00000445181 TEFQ10587 303 aa31.7■■■□□ 2.67
C9orf3-207ENST00000445181 IL17REQ8NFR9 667 aa31.7■■■□□ 2.67
C9orf3-207ENST00000445181 MRC1P22897 1456 aa31.7■■■□□ 2.66
C9orf3-207ENST00000445181 ADAMTS7Q9UKP4 1686 aa31.7■■■□□ 2.66
C9orf3-207ENST00000445181 YY1P25490 414 aa31.69■■■□□ 2.66
C9orf3-207ENST00000445181 UBR3Q6ZT12 1888 aa31.69■■■□□ 2.66
C9orf3-207ENST00000445181 PTCD1O75127 700 aaKnown RBP31.66■■■□□ 2.66
C9orf3-207ENST00000445181 ADAMTS8Q9UP79 889 aa31.66■■■□□ 2.66
C9orf3-207ENST00000445181 NFE2L2Q16236 605 aa31.65■■■□□ 2.66
C9orf3-207ENST00000445181 MCM10Q7L590 875 aa31.65■■■□□ 2.66
C9orf3-207ENST00000445181 HTATSF1O43719 755 aaKnown RBP31.64■■■□□ 2.66
C9orf3-207ENST00000445181 CCDC146Q8IYE0 955 aa31.64■■■□□ 2.66
C9orf3-207ENST00000445181 SLC39A6Q13433 755 aa31.63■■■□□ 2.65
C9orf3-207ENST00000445181 RC3H1Q5TC82 1133 aaKnown RBP31.63■■■□□ 2.65
C9orf3-207ENST00000445181 RTCBQ9Y3I0 505 aaKnown RBP31.63■■■□□ 2.65
C9orf3-207ENST00000445181 ZNF831Q5JPB2 1677 aa31.63■■■□□ 2.65
C9orf3-207ENST00000445181 NLGN2Q8NFZ4 835 aa31.62■■■□□ 2.65
C9orf3-207ENST00000445181 CEMIPQ8WUJ3 1361 aa31.62■■■□□ 2.65
C9orf3-207ENST00000445181 DCTN1Q14203 1278 aa31.61■■■□□ 2.65
C9orf3-207ENST00000445181 TTC5Q8N0Z6 440 aa31.61■■■□□ 2.65
C9orf3-207ENST00000445181 GPR162Q16538 588 aa31.6■■■□□ 2.65
C9orf3-207ENST00000445181 CCDC184Q52MB2 194 aa31.6■■■□□ 2.65
C9orf3-207ENST00000445181 CNTNAP4Q9C0A0 1308 aa31.59■■■□□ 2.65
C9orf3-207ENST00000445181 TRAPPC3LQ5T215 181 aa31.59■■■□□ 2.65
C9orf3-207ENST00000445181 RUNDC1Q96C34 613 aa31.59■■■□□ 2.65
C9orf3-207ENST00000445181 MRS2Q9HD23 443 aa31.59■■■□□ 2.65
C9orf3-207ENST00000445181 DLG5Q8TDM6 1919 aa31.57■■■□□ 2.64
C9orf3-207ENST00000445181 PELP1Q8IZL8 1130 aaKnown RBP31.57■■■□□ 2.64
C9orf3-207ENST00000445181 BTBD11A6QL63 1104 aa31.56■■■□□ 2.64
C9orf3-207ENST00000445181 RPS6KA4O75676 772 aa31.56■■■□□ 2.64
C9orf3-207ENST00000445181 RIPK4P57078 832 aa31.56■■■□□ 2.64
C9orf3-207ENST00000445181 CD2APQ9Y5K6 639 aa31.56■■■□□ 2.64
C9orf3-207ENST00000445181 COL5A3P25940 1745 aaPredicted RBP31.55■■■□□ 2.64
C9orf3-207ENST00000445181 SIPA1L3O60292 1781 aaPredicted RBP31.55■■■□□ 2.64
C9orf3-207ENST00000445181 ADRA2BP18089 450 aa31.54■■■□□ 2.64
C9orf3-207ENST00000445181 TMPOP42166 694 aaKnown RBP31.54■■■□□ 2.64
C9orf3-207ENST00000445181 ARHGEF1Q92888 912 aaKnown RBP31.54■■■□□ 2.64
C9orf3-207ENST00000445181 CRKLP46109 303 aaKnown RBP31.53■■■□□ 2.64
C9orf3-207ENST00000445181 NEUROD2Q15784 382 aa31.53■■■□□ 2.64
C9orf3-207ENST00000445181 ZNF790Q6PG37 636 aa31.53■■■□□ 2.64
C9orf3-207ENST00000445181 RRP7AQ9Y3A4 280 aaKnown RBP31.53■■■□□ 2.64
C9orf3-207ENST00000445181 KCPQ6ZWJ8 1503 aa31.51■■■□□ 2.63
C9orf3-207ENST00000445181 RFC4P35249 363 aa31.51■■■□□ 2.63
C9orf3-207ENST00000445181 LMOD3Q0VAK6 560 aa31.51■■■□□ 2.63
C9orf3-207ENST00000445181 THUMPD2Q9BTF0 503 aaKnown RBP31.5■■■□□ 2.63
C9orf3-207ENST00000445181 TAF7Q15545 349 aaPredicted RBP31.49■■■□□ 2.63
C9orf3-207ENST00000445181 DNAJC10Q8IXB1 793 aa31.49■■■□□ 2.63
C9orf3-207ENST00000445181 MYH14Q7Z406 1995 aaKnown RBP31.48■■■□□ 2.63
C9orf3-207ENST00000445181 MMP10P09238 476 aa31.48■■■□□ 2.63
C9orf3-207ENST00000445181 NLGN1Q8N2Q7 840 aa31.48■■■□□ 2.63
C9orf3-207ENST00000445181 TJP1Q07157 1748 aa31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 170 ms