RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 DOT1LQ8TEK3 1739 aa19.73■□□□□ 0.75
CCNE1-203ENST00000444983 DUSP27Q5VZP5 1158 aa19.72■□□□□ 0.75
CCNE1-203ENST00000444983 NFATC2IPQ8NCF5 419 aa19.72■□□□□ 0.75
CCNE1-203ENST00000444983 GNAI1P63096 354 aa19.71■□□□□ 0.75
CCNE1-203ENST00000444983 TEFQ10587 303 aa19.71■□□□□ 0.75
CCNE1-203ENST00000444983 KDM3BQ7LBC6 1761 aa19.71■□□□□ 0.75
CCNE1-203ENST00000444983 KRT27Q7Z3Y8 459 aa19.7■□□□□ 0.74
CCNE1-203ENST00000444983 MBIPQ9NS73 344 aa19.7■□□□□ 0.74
CCNE1-203ENST00000444983 SBF2Q86WG5 1849 aa19.69■□□□□ 0.74
CCNE1-203ENST00000444983 CABP4P57796 275 aa19.69■□□□□ 0.74
CCNE1-203ENST00000444983 FANCIQ9NVI1 1328 aa19.69■□□□□ 0.74
CCNE1-203ENST00000444983 MYH16Q9H6N6 1097 aa19.68■□□□□ 0.74
CCNE1-203ENST00000444983 MIS18AQ9NYP9 233 aa19.68■□□□□ 0.74
CCNE1-203ENST00000444983 PAPPAQ13219 1627 aa19.68■□□□□ 0.74
CCNE1-203ENST00000444983 FAM182BQ5T319 152 aa19.68■□□□□ 0.74
CCNE1-203ENST00000444983 TSR2Q969E8 191 aaKnown RBP19.68■□□□□ 0.74
CCNE1-203ENST00000444983 EP400Q96L91 3159 aa19.67■□□□□ 0.74
CCNE1-203ENST00000444983 BTBD11A6QL63 1104 aa19.66■□□□□ 0.74
CCNE1-203ENST00000444983 PRIM1P49642 420 aaKnown RBP19.66■□□□□ 0.74
CCNE1-203ENST00000444983 PIGBQ92521 554 aa19.66■□□□□ 0.74
CCNE1-203ENST00000444983 LAS1LQ9Y4W2 734 aaKnown RBP19.66■□□□□ 0.74
CCNE1-203ENST00000444983 NHSQ6T4R5 1651 aa19.66■□□□□ 0.74
CCNE1-203ENST00000444983 TSPYL4Q9UJ04 414 aa19.65■□□□□ 0.74
CCNE1-203ENST00000444983 KAT6BQ8WYB5 2073 aa19.65■□□□□ 0.74
CCNE1-203ENST00000444983 TMOD3Q9NYL9 352 aa19.65■□□□□ 0.74
CCNE1-203ENST00000444983 UBR2Q8IWV8 1755 aa19.65■□□□□ 0.74
CCNE1-203ENST00000444983 KCNQ2O43526 872 aa19.64■□□□□ 0.73
CCNE1-203ENST00000444983 ZNF790Q6PG37 636 aa19.64■□□□□ 0.73
CCNE1-203ENST00000444983 FAM196AQ6ZSG2 479 aa19.64■□□□□ 0.73
CCNE1-203ENST00000444983 ACSBG1Q96GR2 724 aa19.64■□□□□ 0.73
CCNE1-203ENST00000444983 HEG1Q9ULI3 1381 aa19.64■□□□□ 0.73
CCNE1-203ENST00000444983 KCNQ3O43525 872 aa19.63■□□□□ 0.73
CCNE1-203ENST00000444983 EIF4A1P60842 406 aaKnown RBP19.62■□□□□ 0.73
CCNE1-203ENST00000444983 SLC39A6Q13433 755 aa19.62■□□□□ 0.73
CCNE1-203ENST00000444983 PTF1AQ7RTS3 328 aa19.62■□□□□ 0.73
CCNE1-203ENST00000444983 EXOSC9Q06265 439 aaKnown RBP19.61■□□□□ 0.73
CCNE1-203ENST00000444983 SYTL4Q96C24 671 aaPredicted RBP19.61■□□□□ 0.73
CCNE1-203ENST00000444983 KCPQ6ZWJ8 1503 aa19.61■□□□□ 0.73
CCNE1-203ENST00000444983 ATG3Q9NT62 314 aa19.6■□□□□ 0.73
CCNE1-203ENST00000444983 ASAP1Q9ULH1 1129 aa19.6■□□□□ 0.73
CCNE1-203ENST00000444983 BTAF1O14981 1849 aa19.6■□□□□ 0.73
CCNE1-203ENST00000444983 C8orf58Q8NAV2 365 aa19.59■□□□□ 0.73
CCNE1-203ENST00000444983 KRT24Q2M2I5 525 aa19.59■□□□□ 0.73
CCNE1-203ENST00000444983 TSPYL6Q8N831 410 aa19.59■□□□□ 0.73
CCNE1-203ENST00000444983 ZNF496Q96IT1 587 aaPredicted RBP19.58■□□□□ 0.72
CCNE1-203ENST00000444983 BCL11BQ9C0K0 894 aaPredicted RBP19.58■□□□□ 0.72
CCNE1-203ENST00000444983 CT47B1P0C2W7 299 aaPredicted RBP19.57■□□□□ 0.72
CCNE1-203ENST00000444983 VAMP4O75379 141 aa19.56■□□□□ 0.72
CCNE1-203ENST00000444983 TTC5Q8N0Z6 440 aa19.56■□□□□ 0.72
CCNE1-203ENST00000444983 GIGYF1O75420 1035 aaPredicted RBP19.56■□□□□ 0.72
CCNE1-203ENST00000444983 SOS1Q07889 1333 aaPredicted RBP19.55■□□□□ 0.72
CCNE1-203ENST00000444983 TWISTNBQ3B726 338 aaPredicted RBP19.55■□□□□ 0.72
CCNE1-203ENST00000444983 FMNL2Q96PY5 1086 aa19.55■□□□□ 0.72
CCNE1-203ENST00000444983 HOXB7P09629 217 aa19.54■□□□□ 0.72
CCNE1-203ENST00000444983 C5P01031 1676 aa19.54■□□□□ 0.72
CCNE1-203ENST00000444983 ZNF831Q5JPB2 1677 aa19.54■□□□□ 0.72
CCNE1-203ENST00000444983 CICQ96RK0 1608 aaPredicted RBP19.54■□□□□ 0.72
CCNE1-203ENST00000444983 SLC4A9Q96Q91 983 aa19.53■□□□□ 0.72
CCNE1-203ENST00000444983 LY75O60449 1722 aa19.53■□□□□ 0.72
CCNE1-203ENST00000444983 ELL2O00472 640 aaPredicted RBP19.52■□□□□ 0.72
CCNE1-203ENST00000444983 TRIM37O94972 964 aa19.52■□□□□ 0.72
CCNE1-203ENST00000444983 CENPBP07199 599 aaPredicted RBP19.52■□□□□ 0.72
CCNE1-203ENST00000444983 VSIG10Q8N0Z9 540 aa19.52■□□□□ 0.72
CCNE1-203ENST00000444983 SMARCC1Q92922 1105 aaPredicted RBP19.52■□□□□ 0.72
CCNE1-203ENST00000444983 PRAMEF22A3QJZ6 481 aa19.52■□□□□ 0.71
CCNE1-203ENST00000444983 ZNF428Q96B54 188 aa19.52■□□□□ 0.71
CCNE1-203ENST00000444983 PALLDQ8WX93 1383 aa19.52■□□□□ 0.71
CCNE1-203ENST00000444983 TNS1Q9HBL0 1735 aaKnown RBP19.51■□□□□ 0.71
CCNE1-203ENST00000444983 PTCD1O75127 700 aaKnown RBP19.51■□□□□ 0.71
CCNE1-203ENST00000444983 SNRPA1P09661 255 aaKnown RBP19.51■□□□□ 0.71
CCNE1-203ENST00000444983 TJP1Q07157 1748 aa19.5■□□□□ 0.71
CCNE1-203ENST00000444983 LAMB4A4D0S4 1761 aa19.5■□□□□ 0.71
CCNE1-203ENST00000444983 RARSP54136 660 aaKnown RBP19.49■□□□□ 0.71
CCNE1-203ENST00000444983 LOC102724428A0A0B4J2F2 783 aa19.48■□□□□ 0.71
CCNE1-203ENST00000444983 SIK1P57059 783 aa19.48■□□□□ 0.71
CCNE1-203ENST00000444983 RCAN3Q9UKA8 241 aa19.48■□□□□ 0.71
CCNE1-203ENST00000444983 USP16Q9Y5T5 823 aa19.48■□□□□ 0.71
CCNE1-203ENST00000444983 ALDH1L2Q3SY69 923 aa19.47■□□□□ 0.71
CCNE1-203ENST00000444983 SSH1Q8WYL5 1049 aa19.46■□□□□ 0.71
CCNE1-203ENST00000444983 RBM42Q9BTD8 480 aaKnown RBP19.46■□□□□ 0.71
CCNE1-203ENST00000444983 PLSCR1O15162 318 aa19.46■□□□□ 0.71
CCNE1-203ENST00000444983 BRPF1P55201 1214 aaPredicted RBP19.46■□□□□ 0.71
CCNE1-203ENST00000444983 TEX13AQ9BXU3 409 aaPredicted RBP19.46■□□□□ 0.71
CCNE1-203ENST00000444983 CACNA1FO60840 1977 aa19.45■□□□□ 0.7
CCNE1-203ENST00000444983 RGPD3A6NKT7 1758 aaPredicted RBP19.45■□□□□ 0.7
CCNE1-203ENST00000444983 RGPD4Q7Z3J3 1758 aa19.45■□□□□ 0.7
CCNE1-203ENST00000444983 COL5A3P25940 1745 aaPredicted RBP19.45■□□□□ 0.7
CCNE1-203ENST00000444983 ITPK1Q13572 414 aa19.44■□□□□ 0.7
CCNE1-203ENST00000444983 HDGFL1Q5TGJ6 251 aa19.44■□□□□ 0.7
CCNE1-203ENST00000444983 DNAJC10Q8IXB1 793 aa19.44■□□□□ 0.7
CCNE1-203ENST00000444983 CHMP4AQ9BY43 222 aa19.44■□□□□ 0.7
CCNE1-203ENST00000444983 ATP6V1AP38606 617 aa19.43■□□□□ 0.7
CCNE1-203ENST00000444983 PDIA6Q15084 440 aa19.43■□□□□ 0.7
CCNE1-203ENST00000444983 CCDC30Q5VVM6 783 aa19.43■□□□□ 0.7
CCNE1-203ENST00000444983 TAF1LQ8IZX4 1826 aa19.43■□□□□ 0.7
CCNE1-203ENST00000444983 BCAR3O75815 825 aa19.43■□□□□ 0.7
CCNE1-203ENST00000444983 CYP19A1P11511 503 aaPredicted RBP19.43■□□□□ 0.7
CCNE1-203ENST00000444983 EIF2S2P20042 333 aaKnown RBP19.43■□□□□ 0.7
CCNE1-203ENST00000444983 PROM2Q8N271 834 aa19.43■□□□□ 0.7
CCNE1-203ENST00000444983 APBA3O96018 575 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms