RNA–Protein interactions for RNA: ENST00000444688.1

LINC00299-203, long intergenic non-protein coding RNA 299, humanhuman

TSL 4 BASIC

Gene LINC00299, Length 537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-203ENST00000444688 CFAP44Q96MT7 982 aa17.18■□□□□ 0.34
LINC00299-203ENST00000444688 E9PSI1 815 aa17.17■□□□□ 0.34
LINC00299-203ENST00000444688 ZNF853P0CG23 659 aa17.17■□□□□ 0.34
LINC00299-203ENST00000444688 SYTL4Q96C24 671 aaPredicted RBP17.17■□□□□ 0.34
LINC00299-203ENST00000444688 VIRMAQ69YN4 1812 aaKnown RBP17.17■□□□□ 0.34
LINC00299-203ENST00000444688 BTBD11A6QL63 1104 aa17.16■□□□□ 0.34
LINC00299-203ENST00000444688 CHL1O00533 1208 aa17.16■□□□□ 0.34
LINC00299-203ENST00000444688 PIGBQ92521 554 aa17.16■□□□□ 0.34
LINC00299-203ENST00000444688 MYH16Q9H6N6 1097 aa17.16■□□□□ 0.34
LINC00299-203ENST00000444688 NHSQ6T4R5 1651 aa17.16■□□□□ 0.34
LINC00299-203ENST00000444688 SIPA1L3O60292 1781 aaPredicted RBP17.15■□□□□ 0.34
LINC00299-203ENST00000444688 BCL11BQ9C0K0 894 aaPredicted RBP17.15■□□□□ 0.34
LINC00299-203ENST00000444688 KCNQ2O43526 872 aa17.14■□□□□ 0.33
LINC00299-203ENST00000444688 SLFN5Q08AF3 891 aa17.14■□□□□ 0.33
LINC00299-203ENST00000444688 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
LINC00299-203ENST00000444688 LAS1LQ9Y4W2 734 aaKnown RBP17.14■□□□□ 0.33
LINC00299-203ENST00000444688 ITGB4P16144 1822 aa17.14■□□□□ 0.33
LINC00299-203ENST00000444688 SPINK5Q9NQ38 1064 aaPredicted RBP17.13■□□□□ 0.33
LINC00299-203ENST00000444688 SBF2Q86WG5 1849 aa17.12■□□□□ 0.33
LINC00299-203ENST00000444688 ZNF790Q6PG37 636 aa17.12■□□□□ 0.33
LINC00299-203ENST00000444688 TTC5Q8N0Z6 440 aa17.12■□□□□ 0.33
LINC00299-203ENST00000444688 SMARCC1Q92922 1105 aaPredicted RBP17.12■□□□□ 0.33
LINC00299-203ENST00000444688 CDCA7LQ96GN5 454 aa17.12■□□□□ 0.33
LINC00299-203ENST00000444688 MBIPQ9NS73 344 aa17.12■□□□□ 0.33
LINC00299-203ENST00000444688 TRMT2AQ8IZ69 625 aaKnown RBP17.11■□□□□ 0.33
LINC00299-203ENST00000444688 ATG3Q9NT62 314 aa17.11■□□□□ 0.33
LINC00299-203ENST00000444688 MIS18AQ9NYP9 233 aa17.11■□□□□ 0.33
LINC00299-203ENST00000444688 FANCIQ9NVI1 1328 aa17.11■□□□□ 0.33
LINC00299-203ENST00000444688 PAPPAQ13219 1627 aa17.1■□□□□ 0.33
LINC00299-203ENST00000444688 KDM3BQ7LBC6 1761 aa17.1■□□□□ 0.33
LINC00299-203ENST00000444688 TRIM37O94972 964 aa17.1■□□□□ 0.33
LINC00299-203ENST00000444688 SLC39A6Q13433 755 aa17.1■□□□□ 0.33
LINC00299-203ENST00000444688 KAT6BQ8WYB5 2073 aa17.09■□□□□ 0.33
LINC00299-203ENST00000444688 DUSP27Q5VZP5 1158 aa17.09■□□□□ 0.33
LINC00299-203ENST00000444688 PTF1AQ7RTS3 328 aa17.09■□□□□ 0.33
LINC00299-203ENST00000444688 TSR2Q969E8 191 aaKnown RBP17.09■□□□□ 0.33
LINC00299-203ENST00000444688 ASAP1Q9ULH1 1129 aa17.09■□□□□ 0.33
LINC00299-203ENST00000444688 EIF4A1P60842 406 aaKnown RBP17.08■□□□□ 0.32
LINC00299-203ENST00000444688 BTAF1O14981 1849 aa17.07■□□□□ 0.32
LINC00299-203ENST00000444688 PALLDQ8WX93 1383 aa17.07■□□□□ 0.32
LINC00299-203ENST00000444688 KCNQ3O43525 872 aa17.07■□□□□ 0.32
LINC00299-203ENST00000444688 FMNL2Q96PY5 1086 aa17.07■□□□□ 0.32
LINC00299-203ENST00000444688 KCPQ6ZWJ8 1503 aa17.06■□□□□ 0.32
LINC00299-203ENST00000444688 HEG1Q9ULI3 1381 aa17.06■□□□□ 0.32
LINC00299-203ENST00000444688 SOS1Q07889 1333 aaPredicted RBP17.06■□□□□ 0.32
LINC00299-203ENST00000444688 ZNF496Q96IT1 587 aaPredicted RBP17.06■□□□□ 0.32
LINC00299-203ENST00000444688 UBR2Q8IWV8 1755 aa17.05■□□□□ 0.32
LINC00299-203ENST00000444688 VSIG10Q8N0Z9 540 aa17.05■□□□□ 0.32
LINC00299-203ENST00000444688 PLSCR1O15162 318 aa17.04■□□□□ 0.32
LINC00299-203ENST00000444688 PTCD1O75127 700 aaKnown RBP17.04■□□□□ 0.32
LINC00299-203ENST00000444688 APBA3O96018 575 aa17.04■□□□□ 0.32
LINC00299-203ENST00000444688 HOXB7P09629 217 aa17.04■□□□□ 0.32
LINC00299-203ENST00000444688 EXOSC9Q06265 439 aaKnown RBP17.04■□□□□ 0.32
LINC00299-203ENST00000444688 CCDC125Q86Z20 511 aa17.04■□□□□ 0.32
LINC00299-203ENST00000444688 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
LINC00299-203ENST00000444688 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
LINC00299-203ENST00000444688 LOC102724428A0A0B4J2F2 783 aa17.03■□□□□ 0.32
LINC00299-203ENST00000444688 SNRPA1P09661 255 aaKnown RBP17.03■□□□□ 0.32
LINC00299-203ENST00000444688 CT47B1P0C2W7 299 aaPredicted RBP17.03■□□□□ 0.32
LINC00299-203ENST00000444688 SIK1P57059 783 aa17.03■□□□□ 0.32
LINC00299-203ENST00000444688 SF3B2Q13435 895 aaKnown RBP17.03■□□□□ 0.32
LINC00299-203ENST00000444688 GIGYF1O75420 1035 aaPredicted RBP17.02■□□□□ 0.32
LINC00299-203ENST00000444688 C8orf58Q8NAV2 365 aa17.02■□□□□ 0.32
LINC00299-203ENST00000444688 TEX13AQ9BXU3 409 aaPredicted RBP17.02■□□□□ 0.32
LINC00299-203ENST00000444688 CHMP4AQ9BY43 222 aa17.02■□□□□ 0.32
LINC00299-203ENST00000444688 HMGB2P26583 209 aaKnown RBP17.01■□□□□ 0.31
LINC00299-203ENST00000444688 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
LINC00299-203ENST00000444688 TWISTNBQ3B726 338 aaPredicted RBP17.01■□□□□ 0.31
LINC00299-203ENST00000444688 ZNF831Q5JPB2 1677 aa17.01■□□□□ 0.31
LINC00299-203ENST00000444688 EP400Q96L91 3159 aa17■□□□□ 0.31
LINC00299-203ENST00000444688 CICQ96RK0 1608 aaPredicted RBP17■□□□□ 0.31
LINC00299-203ENST00000444688 ATP6V1AP38606 617 aa17■□□□□ 0.31
LINC00299-203ENST00000444688 SLC27A3Q5K4L6 730 aa17■□□□□ 0.31
LINC00299-203ENST00000444688 ZNF428Q96B54 188 aa17■□□□□ 0.31
LINC00299-203ENST00000444688 SLC4A9Q96Q91 983 aa17■□□□□ 0.31
LINC00299-203ENST00000444688 RGPD3A6NKT7 1758 aaPredicted RBP17■□□□□ 0.31
LINC00299-203ENST00000444688 RGPD4Q7Z3J3 1758 aa17■□□□□ 0.31
LINC00299-203ENST00000444688 LY75O60449 1722 aa16.99■□□□□ 0.31
LINC00299-203ENST00000444688 ELL2O00472 640 aaPredicted RBP16.99■□□□□ 0.31
LINC00299-203ENST00000444688 VAMP4O75379 141 aa16.99■□□□□ 0.31
LINC00299-203ENST00000444688 BAG6P46379 1132 aa16.99■□□□□ 0.31
LINC00299-203ENST00000444688 ILDR2Q71H61 639 aa16.99■□□□□ 0.31
LINC00299-203ENST00000444688 TSPYL6Q8N831 410 aa16.99■□□□□ 0.31
LINC00299-203ENST00000444688 CCNL1Q9UK58 526 aaPredicted RBP16.99■□□□□ 0.31
LINC00299-203ENST00000444688 DNAJC10Q8IXB1 793 aa16.98■□□□□ 0.31
LINC00299-203ENST00000444688 STARD3NLO95772 234 aa16.97■□□□□ 0.31
LINC00299-203ENST00000444688 TXNRD1Q16881 649 aa16.97■□□□□ 0.31
LINC00299-203ENST00000444688 HDGFL1Q5TGJ6 251 aa16.97■□□□□ 0.31
LINC00299-203ENST00000444688 PRAMEF22A3QJZ6 481 aa16.96■□□□□ 0.31
LINC00299-203ENST00000444688 ITPK1Q13572 414 aa16.96■□□□□ 0.31
LINC00299-203ENST00000444688 UPF1Q92900 1129 aaKnown RBP eCLIP16.96■□□□□ 0.31
LINC00299-203ENST00000444688 CAMKK2Q96RR4 588 aa16.96■□□□□ 0.31
LINC00299-203ENST00000444688 USP16Q9Y5T5 823 aa16.96■□□□□ 0.31
LINC00299-203ENST00000444688 TJP1Q07157 1748 aa16.96■□□□□ 0.3
LINC00299-203ENST00000444688 ERBB4Q15303 1308 aa16.96■□□□□ 0.3
LINC00299-203ENST00000444688 LAMB4A4D0S4 1761 aa16.95■□□□□ 0.3
LINC00299-203ENST00000444688 C5P01031 1676 aa16.95■□□□□ 0.3
LINC00299-203ENST00000444688 CYP19A1P11511 503 aaPredicted RBP16.95■□□□□ 0.3
LINC00299-203ENST00000444688 CCDC30Q5VVM6 783 aa16.95■□□□□ 0.3
LINC00299-203ENST00000444688 EIF2S2P20042 333 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms