RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 SIK1P57059 783 aa29.26■■■□□ 2.27
TRAF4-205ENST00000444415 SLC4A9Q96Q91 983 aa29.26■■■□□ 2.27
TRAF4-205ENST00000444415 RNMTO43148 476 aaKnown RBP29.25■■■□□ 2.27
TRAF4-205ENST00000444415 CABP4P57796 275 aa29.25■■■□□ 2.27
TRAF4-205ENST00000444415 NFATC2IPQ8NCF5 419 aa29.25■■■□□ 2.27
TRAF4-205ENST00000444415 UBR3Q6ZT12 1888 aa29.25■■■□□ 2.27
TRAF4-205ENST00000444415 SIPA1L3O60292 1781 aaPredicted RBP29.25■■■□□ 2.27
TRAF4-205ENST00000444415 COL5A3P25940 1745 aaPredicted RBP29.24■■■□□ 2.27
TRAF4-205ENST00000444415 ITPK1Q13572 414 aa29.23■■■□□ 2.27
TRAF4-205ENST00000444415 ZBTB7AO95365 584 aa29.23■■■□□ 2.27
TRAF4-205ENST00000444415 MAP3K5Q99683 1374 aa29.22■■■□□ 2.27
TRAF4-205ENST00000444415 COL24A1Q17RW2 1714 aa29.22■■■□□ 2.27
TRAF4-205ENST00000444415 MYBBP1AQ9BQG0 1328 aaKnown RBP29.22■■■□□ 2.27
TRAF4-205ENST00000444415 FCHSD2O94868 740 aa29.22■■■□□ 2.27
TRAF4-205ENST00000444415 AMIGO3Q86WK7 504 aa29.22■■■□□ 2.27
TRAF4-205ENST00000444415 LINC00116Q8NCU8 138 aa29.22■■■□□ 2.27
TRAF4-205ENST00000444415 SLC52A2Q9HAB3 445 aa29.22■■■□□ 2.27
TRAF4-205ENST00000444415 GAS2L2Q8NHY3 880 aa29.21■■■□□ 2.27
TRAF4-205ENST00000444415 CICQ96RK0 1608 aaPredicted RBP29.2■■■□□ 2.27
TRAF4-205ENST00000444415 PRKRIP1Q9H875 184 aaPredicted RBP29.2■■■□□ 2.26
TRAF4-205ENST00000444415 TJP1Q07157 1748 aa29.2■■■□□ 2.26
TRAF4-205ENST00000444415 ZNF316A6NFI3 1004 aaPredicted RBP29.19■■■□□ 2.26
TRAF4-205ENST00000444415 PTGER2P43116 358 aa29.19■■■□□ 2.26
TRAF4-205ENST00000444415 IL17REQ8NFR9 667 aa29.19■■■□□ 2.26
TRAF4-205ENST00000444415 SPON1Q9HCB6 807 aa29.19■■■□□ 2.26
TRAF4-205ENST00000444415 TFCP2L1Q9NZI6 479 aa29.19■■■□□ 2.26
TRAF4-205ENST00000444415 DLG5Q8TDM6 1919 aa29.18■■■□□ 2.26
TRAF4-205ENST00000444415 UBR2Q8IWV8 1755 aa29.18■■■□□ 2.26
TRAF4-205ENST00000444415 MYH14Q7Z406 1995 aaKnown RBP29.17■■■□□ 2.26
TRAF4-205ENST00000444415 SGIP1Q9BQI5 828 aa29.17■■■□□ 2.26
TRAF4-205ENST00000444415 ATP6V1AP38606 617 aa29.17■■■□□ 2.26
TRAF4-205ENST00000444415 PLEKHF1Q96S99 279 aa29.17■■■□□ 2.26
TRAF4-205ENST00000444415 KCPQ6ZWJ8 1503 aa29.16■■■□□ 2.26
TRAF4-205ENST00000444415 CEMIPQ8WUJ3 1361 aa29.16■■■□□ 2.26
TRAF4-205ENST00000444415 GNAT3A8MTJ3 354 aa29.16■■■□□ 2.26
TRAF4-205ENST00000444415 ATF5Q9Y2D1 282 aaPredicted RBP29.16■■■□□ 2.26
TRAF4-205ENST00000444415 SMIM5Q71RC9 77 aa29.15■■■□□ 2.26
TRAF4-205ENST00000444415 MTFR1LQ9H019 292 aa29.15■■■□□ 2.26
TRAF4-205ENST00000444415 COL23A1Q86Y22 540 aaPredicted RBP29.14■■■□□ 2.26
TRAF4-205ENST00000444415 RBM42Q9BTD8 480 aaKnown RBP29.14■■■□□ 2.26
TRAF4-205ENST00000444415 PTCD1O75127 700 aaKnown RBP29.12■■■□□ 2.25
TRAF4-205ENST00000444415 SLC39A6Q13433 755 aa29.12■■■□□ 2.25
TRAF4-205ENST00000444415 UTRNP46939 3433 aa29.1■■■□□ 2.25
TRAF4-205ENST00000444415 AK7Q96M32 723 aa29.09■■■□□ 2.25
TRAF4-205ENST00000444415 SLC16A10Q8TF71 515 aa29.07■■■□□ 2.24
TRAF4-205ENST00000444415 GOLGB1Q14789 3259 aaKnown RBP29.06■■■□□ 2.24
TRAF4-205ENST00000444415 DCTN1Q14203 1278 aa29.05■■■□□ 2.24
TRAF4-205ENST00000444415 MCM10Q7L590 875 aa29.05■■■□□ 2.24
TRAF4-205ENST00000444415 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.04■■■□□ 2.24
TRAF4-205ENST00000444415 CNTNAP4Q9C0A0 1308 aa29.04■■■□□ 2.24
TRAF4-205ENST00000444415 GNPATO15228 680 aa29.04■■■□□ 2.24
TRAF4-205ENST00000444415 C4AP0C0L4 1744 aa29.03■■■□□ 2.24
TRAF4-205ENST00000444415 PHF14O94880 888 aa29.03■■■□□ 2.24
TRAF4-205ENST00000444415 HMGB2P26583 209 aaKnown RBP29.03■■■□□ 2.24
TRAF4-205ENST00000444415 TEFQ10587 303 aa29.03■■■□□ 2.24
TRAF4-205ENST00000444415 SSFA2P28290 1259 aa29.02■■■□□ 2.24
TRAF4-205ENST00000444415 RC3H1Q5TC82 1133 aaKnown RBP29.01■■■□□ 2.23
TRAF4-205ENST00000444415 DNAJC10Q8IXB1 793 aa29.01■■■□□ 2.23
TRAF4-205ENST00000444415 FLAD1Q8NFF5 587 aa29■■■□□ 2.23
TRAF4-205ENST00000444415 KCNQ3O43525 872 aa28.99■■■□□ 2.23
TRAF4-205ENST00000444415 NFE2L2Q16236 605 aa28.99■■■□□ 2.23
TRAF4-205ENST00000444415 ZNF790Q6PG37 636 aa28.99■■■□□ 2.23
TRAF4-205ENST00000444415 PPP1R1BQ9UD71 204 aaPredicted RBP28.99■■■□□ 2.23
TRAF4-205ENST00000444415 MSH5O43196 834 aa28.98■■■□□ 2.23
TRAF4-205ENST00000444415 HTATSF1O43719 755 aaKnown RBP28.98■■■□□ 2.23
TRAF4-205ENST00000444415 CRKLP46109 303 aaKnown RBP28.98■■■□□ 2.23
TRAF4-205ENST00000444415 MSL1Q68DK7 614 aa28.98■■■□□ 2.23
TRAF4-205ENST00000444415 CCDC184Q52MB2 194 aa28.97■■■□□ 2.23
TRAF4-205ENST00000444415 ZNF496Q96IT1 587 aaPredicted RBP28.97■■■□□ 2.23
TRAF4-205ENST00000444415 INTS5Q6P9B9 1019 aaKnown RBP28.97■■■□□ 2.23
TRAF4-205ENST00000444415 RTF1Q92541 710 aaKnown RBP28.97■■■□□ 2.23
TRAF4-205ENST00000444415 RPS6KA4O75676 772 aa28.95■■■□□ 2.22
TRAF4-205ENST00000444415 CYP19A1P11511 503 aaPredicted RBP28.95■■■□□ 2.22
TRAF4-205ENST00000444415 VSIG10Q8N0Z9 540 aa28.95■■■□□ 2.22
TRAF4-205ENST00000444415 ARXQ96QS3 562 aa28.95■■■□□ 2.22
TRAF4-205ENST00000444415 ADAMTS8Q9UP79 889 aa28.95■■■□□ 2.22
TRAF4-205ENST00000444415 KDM3BQ7LBC6 1761 aa28.95■■■□□ 2.22
TRAF4-205ENST00000444415 HEG1Q9ULI3 1381 aa28.94■■■□□ 2.22
TRAF4-205ENST00000444415 RTCBQ9Y3I0 505 aaKnown RBP28.94■■■□□ 2.22
TRAF4-205ENST00000444415 MAPK8IP3Q9UPT6 1336 aa28.94■■■□□ 2.22
TRAF4-205ENST00000444415 BTBD11A6QL63 1104 aa28.93■■■□□ 2.22
TRAF4-205ENST00000444415 CCDC146Q8IYE0 955 aa28.93■■■□□ 2.22
TRAF4-205ENST00000444415 THUMPD2Q9BTF0 503 aaKnown RBP28.93■■■□□ 2.22
TRAF4-205ENST00000444415 FHDC1Q9C0D6 1143 aaPredicted RBP28.93■■■□□ 2.22
TRAF4-205ENST00000444415 PNNQ9H307 717 aaKnown RBP28.93■■■□□ 2.22
TRAF4-205ENST00000444415 TTC5Q8N0Z6 440 aa28.92■■■□□ 2.22
TRAF4-205ENST00000444415 ARHGEF1Q92888 912 aaKnown RBP28.92■■■□□ 2.22
TRAF4-205ENST00000444415 NEFMP07197 916 aa28.91■■■□□ 2.22
TRAF4-205ENST00000444415 TMPOP42166 694 aaKnown RBP28.9■■■□□ 2.22
TRAF4-205ENST00000444415 WDR43Q15061 677 aaKnown RBP eCLIP28.9■■■□□ 2.22
TRAF4-205ENST00000444415 TRAPPC3LQ5T215 181 aa28.89■■■□□ 2.22
TRAF4-205ENST00000444415 SYT17Q9BSW7 474 aa28.89■■■□□ 2.22
TRAF4-205ENST00000444415 CCDC87Q9NVE4 849 aa28.89■■■□□ 2.22
TRAF4-205ENST00000444415 ZBTB1Q9Y2K1 713 aa28.89■■■□□ 2.22
TRAF4-205ENST00000444415 ADRA2BP18089 450 aa28.88■■■□□ 2.21
TRAF4-205ENST00000444415 POLD1P28340 1107 aa28.88■■■□□ 2.21
TRAF4-205ENST00000444415 SOS1Q07889 1333 aaPredicted RBP28.87■■■□□ 2.21
TRAF4-205ENST00000444415 MIS18AQ9NYP9 233 aa28.87■■■□□ 2.21
TRAF4-205ENST00000444415 PRAMEF22A3QJZ6 481 aa28.86■■■□□ 2.21
TRAF4-205ENST00000444415 TAF7Q15545 349 aaPredicted RBP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 559 ms