RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 RTF1Q92541 710 aaKnown RBP16.18■□□□□ 0.18
SLC48A1-202ENST00000442892 PNNQ9H307 717 aaKnown RBP16.18■□□□□ 0.18
SLC48A1-202ENST00000442892 TEFQ10587 303 aa16.17■□□□□ 0.18
SLC48A1-202ENST00000442892 TUBGCP6Q96RT7 1819 aa16.17■□□□□ 0.18
SLC48A1-202ENST00000442892 PAPPAQ13219 1627 aa16.16■□□□□ 0.18
SLC48A1-202ENST00000442892 SLC52A2Q9HAB3 445 aa16.16■□□□□ 0.18
SLC48A1-202ENST00000442892 ATG3Q9NT62 314 aa16.16■□□□□ 0.18
SLC48A1-202ENST00000442892 ADAMTS7Q9UKP4 1686 aa16.15■□□□□ 0.18
SLC48A1-202ENST00000442892 PTCD1O75127 700 aaKnown RBP16.15■□□□□ 0.18
SLC48A1-202ENST00000442892 MCM10Q7L590 875 aa16.15■□□□□ 0.18
SLC48A1-202ENST00000442892 MRS2Q9HD23 443 aa16.15■□□□□ 0.18
SLC48A1-202ENST00000442892 SIPA1L3O60292 1781 aaPredicted RBP16.14■□□□□ 0.17
SLC48A1-202ENST00000442892 LOC102724428A0A0B4J2F2 783 aa16.14■□□□□ 0.17
SLC48A1-202ENST00000442892 ATP6V1AP38606 617 aa16.14■□□□□ 0.17
SLC48A1-202ENST00000442892 SIK1P57059 783 aa16.14■□□□□ 0.17
SLC48A1-202ENST00000442892 DCTN1Q14203 1278 aa16.14■□□□□ 0.17
SLC48A1-202ENST00000442892 SLC15A2Q16348 729 aa16.14■□□□□ 0.17
SLC48A1-202ENST00000442892 ZNF827Q17R98 1081 aa16.14■□□□□ 0.17
SLC48A1-202ENST00000442892 CCDC184Q52MB2 194 aa16.14■□□□□ 0.17
SLC48A1-202ENST00000442892 MRC1P22897 1456 aa16.14■□□□□ 0.17
SLC48A1-202ENST00000442892 SLC39A6Q13433 755 aa16.13■□□□□ 0.17
SLC48A1-202ENST00000442892 NEUROD2Q15784 382 aa16.13■□□□□ 0.17
SLC48A1-202ENST00000442892 IL17REQ8NFR9 667 aa16.13■□□□□ 0.17
SLC48A1-202ENST00000442892 PLEKHF1Q96S99 279 aa16.13■□□□□ 0.17
SLC48A1-202ENST00000442892 TFCP2L1Q9NZI6 479 aa16.13■□□□□ 0.17
SLC48A1-202ENST00000442892 ADAMTS8Q9UP79 889 aa16.13■□□□□ 0.17
SLC48A1-202ENST00000442892 C4BP0C0L5 1744 aa16.12■□□□□ 0.17
SLC48A1-202ENST00000442892 MSH5O43196 834 aa16.12■□□□□ 0.17
SLC48A1-202ENST00000442892 NFE2L2Q16236 605 aa16.12■□□□□ 0.17
SLC48A1-202ENST00000442892 RRP7AQ9Y3A4 280 aaKnown RBP16.12■□□□□ 0.17
SLC48A1-202ENST00000442892 TTC5Q8N0Z6 440 aa16.11■□□□□ 0.17
SLC48A1-202ENST00000442892 AK7Q96M32 723 aa16.11■□□□□ 0.17
SLC48A1-202ENST00000442892 RUNDC1Q96C34 613 aa16.1■□□□□ 0.17
SLC48A1-202ENST00000442892 CASZ1Q86V15 1759 aa16.1■□□□□ 0.17
SLC48A1-202ENST00000442892 TJP1Q07157 1748 aa16.09■□□□□ 0.17
SLC48A1-202ENST00000442892 QSER1Q2KHR3 1735 aa16.09■□□□□ 0.17
SLC48A1-202ENST00000442892 PHF14O94880 888 aa16.09■□□□□ 0.17
SLC48A1-202ENST00000442892 RIPK4P57078 832 aa16.09■□□□□ 0.17
SLC48A1-202ENST00000442892 ITPK1Q13572 414 aa16.09■□□□□ 0.17
SLC48A1-202ENST00000442892 LINC00116Q8NCU8 138 aa16.09■□□□□ 0.17
SLC48A1-202ENST00000442892 AKT1S1Q96B36 256 aa16.09■□□□□ 0.17
SLC48A1-202ENST00000442892 THUMPD2Q9BTF0 503 aaKnown RBP16.09■□□□□ 0.17
SLC48A1-202ENST00000442892 PDGFDQ9GZP0 370 aaPredicted RBP16.09■□□□□ 0.17
SLC48A1-202ENST00000442892 COL5A3P25940 1745 aaPredicted RBP16.08■□□□□ 0.17
SLC48A1-202ENST00000442892 UBR2Q8IWV8 1755 aa16.08■□□□□ 0.17
SLC48A1-202ENST00000442892 SENP3-EIF4A1A0A087X0R7 540 aa16.08■□□□□ 0.16
SLC48A1-202ENST00000442892 BTBD11A6QL63 1104 aa16.08■□□□□ 0.16
SLC48A1-202ENST00000442892 ZBTB7AO95365 584 aa16.08■□□□□ 0.16
SLC48A1-202ENST00000442892 CEMIPQ8WUJ3 1361 aa16.08■□□□□ 0.16
SLC48A1-202ENST00000442892 UBR3Q6ZT12 1888 aa16.08■□□□□ 0.16
SLC48A1-202ENST00000442892 TMPOP42166 694 aaKnown RBP16.07■□□□□ 0.16
SLC48A1-202ENST00000442892 ZNF831Q5JPB2 1677 aa16.06■□□□□ 0.16
SLC48A1-202ENST00000442892 KCPQ6ZWJ8 1503 aa16.06■□□□□ 0.16
SLC48A1-202ENST00000442892 GNPATO15228 680 aa16.06■□□□□ 0.16
SLC48A1-202ENST00000442892 HTATSF1O43719 755 aaKnown RBP16.06■□□□□ 0.16
SLC48A1-202ENST00000442892 SMIM5Q71RC9 77 aa16.06■□□□□ 0.16
SLC48A1-202ENST00000442892 SLC4A9Q96Q91 983 aa16.06■□□□□ 0.16
SLC48A1-202ENST00000442892 PNPLA7Q6ZV29 1317 aa16.05■□□□□ 0.16
SLC48A1-202ENST00000442892 HMGB2P26583 209 aaKnown RBP16.05■□□□□ 0.16
SLC48A1-202ENST00000442892 LMOD3Q0VAK6 560 aa16.05■□□□□ 0.16
SLC48A1-202ENST00000442892 FAM9BQ8IZU0 186 aa16.05■□□□□ 0.16
SLC48A1-202ENST00000442892 MIS18AQ9NYP9 233 aa16.05■□□□□ 0.16
SLC48A1-202ENST00000442892 ATF5Q9Y2D1 282 aaPredicted RBP16.05■□□□□ 0.16
SLC48A1-202ENST00000442892 MYH14Q7Z406 1995 aaKnown RBP16.04■□□□□ 0.16
SLC48A1-202ENST00000442892 KCNQ3O43525 872 aa16.04■□□□□ 0.16
SLC48A1-202ENST00000442892 ZNF790Q6PG37 636 aa16.04■□□□□ 0.16
SLC48A1-202ENST00000442892 DNAJC10Q8IXB1 793 aa16.04■□□□□ 0.16
SLC48A1-202ENST00000442892 APAF1O14727 1248 aa16.03■□□□□ 0.16
SLC48A1-202ENST00000442892 TAF7Q15545 349 aaPredicted RBP16.03■□□□□ 0.16
SLC48A1-202ENST00000442892 PPP1R1BQ9UD71 204 aaPredicted RBP16.03■□□□□ 0.16
SLC48A1-202ENST00000442892 LAS1LQ9Y4W2 734 aaKnown RBP16.03■□□□□ 0.16
SLC48A1-202ENST00000442892 LRP5O75197 1615 aa16.03■□□□□ 0.16
SLC48A1-202ENST00000442892 KDM3BQ7LBC6 1761 aa16.03■□□□□ 0.16
SLC48A1-202ENST00000442892 DIEXFQ68CQ4 756 aaKnown RBP16.02■□□□□ 0.16
SLC48A1-202ENST00000442892 ZNF496Q96IT1 587 aaPredicted RBP16.02■□□□□ 0.16
SLC48A1-202ENST00000442892 FMNL2Q96PY5 1086 aa16.02■□□□□ 0.16
SLC48A1-202ENST00000442892 SPON1Q9HCB6 807 aa16.02■□□□□ 0.16
SLC48A1-202ENST00000442892 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.01■□□□□ 0.15
SLC48A1-202ENST00000442892 CRKLP46109 303 aaKnown RBP16.01■□□□□ 0.15
SLC48A1-202ENST00000442892 MSL1Q68DK7 614 aa16.01■□□□□ 0.15
SLC48A1-202ENST00000442892 COL23A1Q86Y22 540 aaPredicted RBP16.01■□□□□ 0.15
SLC48A1-202ENST00000442892 PNISRQ8TF01 805 aaKnown RBP16.01■□□□□ 0.15
SLC48A1-202ENST00000442892 CICQ96RK0 1608 aaPredicted RBP16.01■□□□□ 0.15
SLC48A1-202ENST00000442892 AMIGO3Q86WK7 504 aa16■□□□□ 0.15
SLC48A1-202ENST00000442892 FLAD1Q8NFF5 587 aa16■□□□□ 0.15
SLC48A1-202ENST00000442892 TSPYL4Q9UJ04 414 aa16■□□□□ 0.15
SLC48A1-202ENST00000442892 RTCBQ9Y3I0 505 aaKnown RBP16■□□□□ 0.15
SLC48A1-202ENST00000442892 HEG1Q9ULI3 1381 aa16■□□□□ 0.15
SLC48A1-202ENST00000442892 CNTNAP4Q9C0A0 1308 aa15.99■□□□□ 0.15
SLC48A1-202ENST00000442892 MTFR1LQ9H019 292 aa15.99■□□□□ 0.15
SLC48A1-202ENST00000442892 ZNF330Q9Y3S2 320 aaPredicted RBP15.99■□□□□ 0.15
SLC48A1-202ENST00000442892 SALL2Q9Y467 1007 aaPredicted RBP15.99■□□□□ 0.15
SLC48A1-202ENST00000442892 C4AP0C0L4 1744 aa15.99■□□□□ 0.15
SLC48A1-202ENST00000442892 CANXP27824 592 aaKnown RBP15.98■□□□□ 0.15
SLC48A1-202ENST00000442892 SSFA2P28290 1259 aa15.98■□□□□ 0.15
SLC48A1-202ENST00000442892 CCDC87Q9NVE4 849 aa15.98■□□□□ 0.15
SLC48A1-202ENST00000442892 STARD3NLO95772 234 aa15.97■□□□□ 0.15
SLC48A1-202ENST00000442892 CYP19A1P11511 503 aaPredicted RBP15.97■□□□□ 0.15
SLC48A1-202ENST00000442892 TRAPPC3LQ5T215 181 aa15.97■□□□□ 0.15
SLC48A1-202ENST00000442892 RC3H1Q5TC82 1133 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms