RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 BTBD11A6QL63 1104 aa17.71■□□□□ 0.43
TM9SF4-204ENST00000442842 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
TM9SF4-204ENST00000442842 BCL11BQ9C0K0 894 aaPredicted RBP17.71■□□□□ 0.43
TM9SF4-204ENST00000442842 MIS18AQ9NYP9 233 aa17.71■□□□□ 0.43
TM9SF4-204ENST00000442842 ITGB4P16144 1822 aa17.7■□□□□ 0.42
TM9SF4-204ENST00000442842 SBF2Q86WG5 1849 aa17.7■□□□□ 0.42
TM9SF4-204ENST00000442842 TNS1Q9HBL0 1735 aaKnown RBP17.7■□□□□ 0.42
TM9SF4-204ENST00000442842 SLC39A6Q13433 755 aa17.7■□□□□ 0.42
TM9SF4-204ENST00000442842 TSPYL4Q9UJ04 414 aa17.7■□□□□ 0.42
TM9SF4-204ENST00000442842 SIPA1L3O60292 1781 aaPredicted RBP17.7■□□□□ 0.42
TM9SF4-204ENST00000442842 PAPPAQ13219 1627 aa17.69■□□□□ 0.42
TM9SF4-204ENST00000442842 SF3B2Q13435 895 aaKnown RBP17.69■□□□□ 0.42
TM9SF4-204ENST00000442842 TAF7Q15545 349 aaPredicted RBP17.69■□□□□ 0.42
TM9SF4-204ENST00000442842 TTC5Q8N0Z6 440 aa17.69■□□□□ 0.42
TM9SF4-204ENST00000442842 BTAF1O14981 1849 aa17.69■□□□□ 0.42
TM9SF4-204ENST00000442842 ZNF521Q96K83 1311 aa17.69■□□□□ 0.42
TM9SF4-204ENST00000442842 PALLDQ8WX93 1383 aa17.68■□□□□ 0.42
TM9SF4-204ENST00000442842 WDR63Q8IWG1 891 aa17.68■□□□□ 0.42
TM9SF4-204ENST00000442842 ASAP1Q9ULH1 1129 aa17.68■□□□□ 0.42
TM9SF4-204ENST00000442842 ZBED9Q6R2W3 1325 aa17.68■□□□□ 0.42
TM9SF4-204ENST00000442842 APBA3O96018 575 aa17.67■□□□□ 0.42
TM9SF4-204ENST00000442842 GNAI1P63096 354 aa17.67■□□□□ 0.42
TM9SF4-204ENST00000442842 TSR2Q969E8 191 aaKnown RBP17.67■□□□□ 0.42
TM9SF4-204ENST00000442842 ATG3Q9NT62 314 aa17.67■□□□□ 0.42
TM9SF4-204ENST00000442842 IFT57Q9NWB7 429 aa17.67■□□□□ 0.42
TM9SF4-204ENST00000442842 KCNQ3O43525 872 aa17.66■□□□□ 0.42
TM9SF4-204ENST00000442842 GOLGA2Q08379 1002 aa17.66■□□□□ 0.42
TM9SF4-204ENST00000442842 CFAP44Q96MT7 982 aa17.66■□□□□ 0.42
TM9SF4-204ENST00000442842 IL16Q14005 1332 aa17.66■□□□□ 0.42
TM9SF4-204ENST00000442842 PTCD1O75127 700 aaKnown RBP17.65■□□□□ 0.42
TM9SF4-204ENST00000442842 ZNF790Q6PG37 636 aa17.65■□□□□ 0.42
TM9SF4-204ENST00000442842 RBM42Q9BTD8 480 aaKnown RBP17.65■□□□□ 0.42
TM9SF4-204ENST00000442842 SPINK5Q9NQ38 1064 aaPredicted RBP17.65■□□□□ 0.42
TM9SF4-204ENST00000442842 MBIPQ9NS73 344 aa17.65■□□□□ 0.42
TM9SF4-204ENST00000442842 KCPQ6ZWJ8 1503 aa17.65■□□□□ 0.42
TM9SF4-204ENST00000442842 KDM3BQ7LBC6 1761 aa17.65■□□□□ 0.42
TM9SF4-204ENST00000442842 SMARCC1Q92922 1105 aaPredicted RBP17.64■□□□□ 0.41
TM9SF4-204ENST00000442842 FANCIQ9NVI1 1328 aa17.64■□□□□ 0.41
TM9SF4-204ENST00000442842 CHL1O00533 1208 aa17.63■□□□□ 0.41
TM9SF4-204ENST00000442842 CDCA7LQ96GN5 454 aa17.63■□□□□ 0.41
TM9SF4-204ENST00000442842 E9PSI1 815 aa17.62■□□□□ 0.41
TM9SF4-204ENST00000442842 ZNF853P0CG23 659 aa17.62■□□□□ 0.41
TM9SF4-204ENST00000442842 BAG6P46379 1132 aa17.62■□□□□ 0.41
TM9SF4-204ENST00000442842 FMNL2Q96PY5 1086 aa17.62■□□□□ 0.41
TM9SF4-204ENST00000442842 MYH16Q9H6N6 1097 aa17.62■□□□□ 0.41
TM9SF4-204ENST00000442842 BABAM1Q9NWV8 329 aa17.62■□□□□ 0.41
TM9SF4-204ENST00000442842 UPF1Q92900 1129 aaKnown RBP eCLIP17.61■□□□□ 0.41
TM9SF4-204ENST00000442842 ZNF496Q96IT1 587 aaPredicted RBP17.61■□□□□ 0.41
TM9SF4-204ENST00000442842 UBR2Q8IWV8 1755 aa17.61■□□□□ 0.41
TM9SF4-204ENST00000442842 EIF4A1P60842 406 aaKnown RBP17.6■□□□□ 0.41
TM9SF4-204ENST00000442842 EN1Q05925 392 aaPredicted RBP17.6■□□□□ 0.41
TM9SF4-204ENST00000442842 DEFB132Q7Z7B7 95 aa17.6■□□□□ 0.41
TM9SF4-204ENST00000442842 CCNL1Q9UK58 526 aaPredicted RBP17.6■□□□□ 0.41
TM9SF4-204ENST00000442842 HEG1Q9ULI3 1381 aa17.59■□□□□ 0.41
TM9SF4-204ENST00000442842 LOC102724428A0A0B4J2F2 783 aa17.59■□□□□ 0.41
TM9SF4-204ENST00000442842 KCNQ4P56696 695 aa17.59■□□□□ 0.41
TM9SF4-204ENST00000442842 SIK1P57059 783 aa17.59■□□□□ 0.41
TM9SF4-204ENST00000442842 SLFN5Q08AF3 891 aa17.59■□□□□ 0.41
TM9SF4-204ENST00000442842 KRT24Q2M2I5 525 aa17.59■□□□□ 0.41
TM9SF4-204ENST00000442842 ATP6V1AP38606 617 aa17.58■□□□□ 0.4
TM9SF4-204ENST00000442842 EZH2Q15910 746 aaKnown RBP17.58■□□□□ 0.4
TM9SF4-204ENST00000442842 CCDC125Q86Z20 511 aa17.58■□□□□ 0.4
TM9SF4-204ENST00000442842 LY75O60449 1722 aa17.58■□□□□ 0.4
TM9SF4-204ENST00000442842 PRAMEF22A3QJZ6 481 aa17.57■□□□□ 0.4
TM9SF4-204ENST00000442842 PLSCR1O15162 318 aa17.57■□□□□ 0.4
TM9SF4-204ENST00000442842 TXNRD1Q16881 649 aa17.57■□□□□ 0.4
TM9SF4-204ENST00000442842 SLC4A9Q96Q91 983 aa17.57■□□□□ 0.4
TM9SF4-204ENST00000442842 RGPD3A6NKT7 1758 aaPredicted RBP17.57■□□□□ 0.4
TM9SF4-204ENST00000442842 RGPD4Q7Z3J3 1758 aa17.57■□□□□ 0.4
TM9SF4-204ENST00000442842 TJP1Q07157 1748 aa17.56■□□□□ 0.4
TM9SF4-204ENST00000442842 C5P01031 1676 aa17.56■□□□□ 0.4
TM9SF4-204ENST00000442842 ELL2O00472 640 aaPredicted RBP17.56■□□□□ 0.4
TM9SF4-204ENST00000442842 EXOSC9Q06265 439 aaKnown RBP17.56■□□□□ 0.4
TM9SF4-204ENST00000442842 DNAJC10Q8IXB1 793 aa17.56■□□□□ 0.4
TM9SF4-204ENST00000442842 KAT6BQ8WYB5 2073 aa17.56■□□□□ 0.4
TM9SF4-204ENST00000442842 ITPK1Q13572 414 aa17.55■□□□□ 0.4
TM9SF4-204ENST00000442842 SNRPA1P09661 255 aaKnown RBP17.54■□□□□ 0.4
TM9SF4-204ENST00000442842 DUSP27Q5VZP5 1158 aa17.54■□□□□ 0.4
TM9SF4-204ENST00000442842 VSIG10Q8N0Z9 540 aa17.54■□□□□ 0.4
TM9SF4-204ENST00000442842 C8orf58Q8NAV2 365 aa17.54■□□□□ 0.4
TM9SF4-204ENST00000442842 NECTIN2Q92692 538 aa17.54■□□□□ 0.4
TM9SF4-204ENST00000442842 CAMKK2Q96RR4 588 aa17.54■□□□□ 0.4
TM9SF4-204ENST00000442842 LRRC4BQ9NT99 713 aa17.54■□□□□ 0.4
TM9SF4-204ENST00000442842 RREB1Q92766 1687 aa17.53■□□□□ 0.4
TM9SF4-204ENST00000442842 GIGYF1O75420 1035 aaPredicted RBP17.53■□□□□ 0.4
TM9SF4-204ENST00000442842 TWISTNBQ3B726 338 aaPredicted RBP17.53■□□□□ 0.4
TM9SF4-204ENST00000442842 SLC27A3Q5K4L6 730 aa17.53■□□□□ 0.4
TM9SF4-204ENST00000442842 TSPYL6Q8N831 410 aa17.53■□□□□ 0.4
TM9SF4-204ENST00000442842 LINC00116Q8NCU8 138 aa17.53■□□□□ 0.4
TM9SF4-204ENST00000442842 LAMB4A4D0S4 1761 aa17.53■□□□□ 0.4
TM9SF4-204ENST00000442842 CICQ96RK0 1608 aaPredicted RBP17.52■□□□□ 0.4
TM9SF4-204ENST00000442842 EIF2S2P20042 333 aaKnown RBP17.52■□□□□ 0.4
TM9SF4-204ENST00000442842 PROM2Q8N271 834 aa17.52■□□□□ 0.4
TM9SF4-204ENST00000442842 HDGFL1Q5TGJ6 251 aa17.51■□□□□ 0.39
TM9SF4-204ENST00000442842 TRMT2AQ8IZ69 625 aaKnown RBP17.51■□□□□ 0.39
TM9SF4-204ENST00000442842 ZNF831Q5JPB2 1677 aa17.51■□□□□ 0.39
TM9SF4-204ENST00000442842 NUP188Q5SRE5 1749 aa17.5■□□□□ 0.39
TM9SF4-204ENST00000442842 USP16Q9Y5T5 823 aa17.5■□□□□ 0.39
TM9SF4-204ENST00000442842 COL5A3P25940 1745 aaPredicted RBP17.5■□□□□ 0.39
TM9SF4-204ENST00000442842 STARD3NLO95772 234 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms