RNA–Protein interactions for RNA: ENST00000442522.6

CCDC66-208, Transcript of coiled-coil domain containing 66, humanhuman

TSL 5

Gene CCDC66, Length 2,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-208ENST00000442522 CFAP44Q96MT7 982 aa12.57□□□□□ -0.4
CCDC66-208ENST00000442522 MRC1P22897 1456 aa12.57□□□□□ -0.4
CCDC66-208ENST00000442522 DOT1LQ8TEK3 1739 aa12.57□□□□□ -0.4
CCDC66-208ENST00000442522 BTBD11A6QL63 1104 aa12.57□□□□□ -0.4
CCDC66-208ENST00000442522 NFATC2IPQ8NCF5 419 aa12.57□□□□□ -0.4
CCDC66-208ENST00000442522 ACSBG1Q96GR2 724 aa12.56□□□□□ -0.4
CCDC66-208ENST00000442522 TSPYL4Q9UJ04 414 aa12.56□□□□□ -0.4
CCDC66-208ENST00000442522 PRIM1P49642 420 aaKnown RBP12.56□□□□□ -0.4
CCDC66-208ENST00000442522 FAM182BQ5T319 152 aa12.56□□□□□ -0.4
CCDC66-208ENST00000442522 TTC5Q8N0Z6 440 aa12.56□□□□□ -0.4
CCDC66-208ENST00000442522 KAT6BQ8WYB5 2073 aa12.56□□□□□ -0.4
CCDC66-208ENST00000442522 TOGARAM1Q9Y4F4 1720 aa12.55□□□□□ -0.4
CCDC66-208ENST00000442522 ITGB4P16144 1822 aa12.54□□□□□ -0.4
CCDC66-208ENST00000442522 SIPA1L3O60292 1781 aaPredicted RBP12.54□□□□□ -0.4
CCDC66-208ENST00000442522 CHL1O00533 1208 aa12.54□□□□□ -0.4
CCDC66-208ENST00000442522 SLFN5Q08AF3 891 aa12.54□□□□□ -0.4
CCDC66-208ENST00000442522 ZNF853P0CG23 659 aa12.53□□□□□ -0.4
CCDC66-208ENST00000442522 GTF3C3Q9Y5Q9 886 aa12.53□□□□□ -0.4
CCDC66-208ENST00000442522 NHSQ6T4R5 1651 aa12.53□□□□□ -0.4
CCDC66-208ENST00000442522 PIGBQ92521 554 aa12.53□□□□□ -0.4
CCDC66-208ENST00000442522 MBIPQ9NS73 344 aa12.53□□□□□ -0.4
CCDC66-208ENST00000442522 ZNF790Q6PG37 636 aa12.52□□□□□ -0.4
CCDC66-208ENST00000442522 SMARCC1Q92922 1105 aaPredicted RBP12.52□□□□□ -0.4
CCDC66-208ENST00000442522 CDCA7LQ96GN5 454 aa12.52□□□□□ -0.4
CCDC66-208ENST00000442522 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.4
CCDC66-208ENST00000442522 FANCIQ9NVI1 1328 aa12.52□□□□□ -0.41
CCDC66-208ENST00000442522 MIS18AQ9NYP9 233 aa12.52□□□□□ -0.41
CCDC66-208ENST00000442522 SBF2Q86WG5 1849 aa12.51□□□□□ -0.41
CCDC66-208ENST00000442522 KCNQ2O43526 872 aa12.51□□□□□ -0.41
CCDC66-208ENST00000442522 TSR2Q969E8 191 aaKnown RBP12.51□□□□□ -0.41
CCDC66-208ENST00000442522 KDM3BQ7LBC6 1761 aa12.51□□□□□ -0.41
CCDC66-208ENST00000442522 FMNL2Q96PY5 1086 aa12.5□□□□□ -0.41
CCDC66-208ENST00000442522 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
CCDC66-208ENST00000442522 TRIM37O94972 964 aa12.5□□□□□ -0.41
CCDC66-208ENST00000442522 SLC39A6Q13433 755 aa12.5□□□□□ -0.41
CCDC66-208ENST00000442522 CHMP4AQ9BY43 222 aa12.5□□□□□ -0.41
CCDC66-208ENST00000442522 DUSP27Q5VZP5 1158 aa12.49□□□□□ -0.41
CCDC66-208ENST00000442522 TRMT2AQ8IZ69 625 aaKnown RBP12.49□□□□□ -0.41
CCDC66-208ENST00000442522 PAPPAQ13219 1627 aa12.49□□□□□ -0.41
CCDC66-208ENST00000442522 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
CCDC66-208ENST00000442522 ATG3Q9NT62 314 aa12.49□□□□□ -0.41
CCDC66-208ENST00000442522 ASAP1Q9ULH1 1129 aa12.49□□□□□ -0.41
CCDC66-208ENST00000442522 SOS1Q07889 1333 aaPredicted RBP12.48□□□□□ -0.41
CCDC66-208ENST00000442522 BTAF1O14981 1849 aa12.48□□□□□ -0.41
CCDC66-208ENST00000442522 PALLDQ8WX93 1383 aa12.48□□□□□ -0.41
CCDC66-208ENST00000442522 PTCD1O75127 700 aaKnown RBP12.47□□□□□ -0.41
CCDC66-208ENST00000442522 CT47B1P0C2W7 299 aaPredicted RBP12.47□□□□□ -0.41
CCDC66-208ENST00000442522 HMGB2P26583 209 aaKnown RBP12.47□□□□□ -0.41
CCDC66-208ENST00000442522 EIF4A1P60842 406 aaKnown RBP12.47□□□□□ -0.41
CCDC66-208ENST00000442522 RBM42Q9BTD8 480 aaKnown RBP12.47□□□□□ -0.41
CCDC66-208ENST00000442522 EXOSC9Q06265 439 aaKnown RBP12.47□□□□□ -0.41
CCDC66-208ENST00000442522 UBR2Q8IWV8 1755 aa12.46□□□□□ -0.41
CCDC66-208ENST00000442522 KCNQ3O43525 872 aa12.46□□□□□ -0.41
CCDC66-208ENST00000442522 HOXB7P09629 217 aa12.46□□□□□ -0.41
CCDC66-208ENST00000442522 SNRPA1P09661 255 aaKnown RBP12.46□□□□□ -0.41
CCDC66-208ENST00000442522 TWISTNBQ3B726 338 aaPredicted RBP12.46□□□□□ -0.41
CCDC66-208ENST00000442522 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
CCDC66-208ENST00000442522 ZNF496Q96IT1 587 aaPredicted RBP12.46□□□□□ -0.41
CCDC66-208ENST00000442522 TEX13AQ9BXU3 409 aaPredicted RBP12.46□□□□□ -0.41
CCDC66-208ENST00000442522 APBA3O96018 575 aa12.46□□□□□ -0.42
CCDC66-208ENST00000442522 HEG1Q9ULI3 1381 aa12.45□□□□□ -0.42
CCDC66-208ENST00000442522 CCDC125Q86Z20 511 aa12.45□□□□□ -0.42
CCDC66-208ENST00000442522 ZNF428Q96B54 188 aa12.45□□□□□ -0.42
CCDC66-208ENST00000442522 KCPQ6ZWJ8 1503 aa12.45□□□□□ -0.42
CCDC66-208ENST00000442522 LOC102724428A0A0B4J2F2 783 aa12.45□□□□□ -0.42
CCDC66-208ENST00000442522 ELL2O00472 640 aaPredicted RBP12.45□□□□□ -0.42
CCDC66-208ENST00000442522 SIK1P57059 783 aa12.45□□□□□ -0.42
CCDC66-208ENST00000442522 PTF1AQ7RTS3 328 aa12.45□□□□□ -0.42
CCDC66-208ENST00000442522 GIGYF1O75420 1035 aaPredicted RBP12.44□□□□□ -0.42
CCDC66-208ENST00000442522 ATP6V1AP38606 617 aa12.44□□□□□ -0.42
CCDC66-208ENST00000442522 C8orf58Q8NAV2 365 aa12.44□□□□□ -0.42
CCDC66-208ENST00000442522 PLSCR1O15162 318 aa12.43□□□□□ -0.42
CCDC66-208ENST00000442522 STARD3NLO95772 234 aa12.43□□□□□ -0.42
CCDC66-208ENST00000442522 BAG6P46379 1132 aa12.43□□□□□ -0.42
CCDC66-208ENST00000442522 SLC27A3Q5K4L6 730 aa12.43□□□□□ -0.42
CCDC66-208ENST00000442522 CCDC30Q5VVM6 783 aa12.43□□□□□ -0.42
CCDC66-208ENST00000442522 CCNL1Q9UK58 526 aaPredicted RBP12.43□□□□□ -0.42
CCDC66-208ENST00000442522 TNS1Q9HBL0 1735 aaKnown RBP12.42□□□□□ -0.42
CCDC66-208ENST00000442522 KRT24Q2M2I5 525 aa12.42□□□□□ -0.42
CCDC66-208ENST00000442522 HDGFL1Q5TGJ6 251 aa12.42□□□□□ -0.42
CCDC66-208ENST00000442522 TSPYL6Q8N831 410 aa12.42□□□□□ -0.42
CCDC66-208ENST00000442522 STK31Q9BXU1 1019 aa12.42□□□□□ -0.42
CCDC66-208ENST00000442522 ZNF831Q5JPB2 1677 aa12.42□□□□□ -0.42
CCDC66-208ENST00000442522 VAMP4O75379 141 aa12.42□□□□□ -0.42
CCDC66-208ENST00000442522 EIF2S2P20042 333 aaKnown RBP12.42□□□□□ -0.42
CCDC66-208ENST00000442522 LY75O60449 1722 aa12.41□□□□□ -0.42
CCDC66-208ENST00000442522 LAMB4A4D0S4 1761 aa12.41□□□□□ -0.42
CCDC66-208ENST00000442522 RGPD3A6NKT7 1758 aaPredicted RBP12.41□□□□□ -0.42
CCDC66-208ENST00000442522 RGPD4Q7Z3J3 1758 aa12.41□□□□□ -0.42
CCDC66-208ENST00000442522 EP400Q96L91 3159 aa12.4□□□□□ -0.42
CCDC66-208ENST00000442522 ALDH1L2Q3SY69 923 aa12.4□□□□□ -0.42
CCDC66-208ENST00000442522 DNAJC10Q8IXB1 793 aa12.4□□□□□ -0.42
CCDC66-208ENST00000442522 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.42
CCDC66-208ENST00000442522 C5P01031 1676 aa12.4□□□□□ -0.43
CCDC66-208ENST00000442522 CICQ96RK0 1608 aaPredicted RBP12.4□□□□□ -0.43
CCDC66-208ENST00000442522 ERBB4Q15303 1308 aa12.39□□□□□ -0.43
CCDC66-208ENST00000442522 NPM2Q86SE8 214 aaKnown RBP12.39□□□□□ -0.43
CCDC66-208ENST00000442522 DBF4Q9UBU7 674 aaPredicted RBP12.39□□□□□ -0.43
CCDC66-208ENST00000442522 USP16Q9Y5T5 823 aa12.39□□□□□ -0.43
CCDC66-208ENST00000442522 PRAMEF22A3QJZ6 481 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms