RNA–Protein interactions for RNA: ENST00000442489.1

CDKN1B-203, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 5

Gene CDKN1B, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-203ENST00000442489 ERVV-2B6SEH9 535 aa22.34■■□□□ 1.17
CDKN1B-203ENST00000442489 CFAP53Q96M91 514 aa22.34■■□□□ 1.17
CDKN1B-203ENST00000442489 SCN11AQ9UI33 1791 aa22.33■■□□□ 1.17
CDKN1B-203ENST00000442489 ZNF530Q6P9A1 599 aaPredicted RBP22.33■■□□□ 1.17
CDKN1B-203ENST00000442489 KDM6AO15550 1401 aaPredicted RBP22.32■■□□□ 1.16
CDKN1B-203ENST00000442489 ZNF831Q5JPB2 1677 aa22.32■■□□□ 1.16
CDKN1B-203ENST00000442489 ADAMTS7Q9UKP4 1686 aa22.32■■□□□ 1.16
CDKN1B-203ENST00000442489 LOC102724428A0A0B4J2F2 783 aa22.31■■□□□ 1.16
CDKN1B-203ENST00000442489 PHF14O94880 888 aa22.31■■□□□ 1.16
CDKN1B-203ENST00000442489 SIK1P57059 783 aa22.31■■□□□ 1.16
CDKN1B-203ENST00000442489 CNGB1Q14028 1251 aaPredicted RBP22.31■■□□□ 1.16
CDKN1B-203ENST00000442489 ASAP1Q9ULH1 1129 aa22.31■■□□□ 1.16
CDKN1B-203ENST00000442489 UBR3Q6ZT12 1888 aa22.3■■□□□ 1.16
CDKN1B-203ENST00000442489 C1orf141Q5JVX7 400 aa22.3■■□□□ 1.16
CDKN1B-203ENST00000442489 VIRMAQ69YN4 1812 aaKnown RBP22.29■■□□□ 1.16
CDKN1B-203ENST00000442489 HMOX1P09601 288 aa22.29■■□□□ 1.16
CDKN1B-203ENST00000442489 AKAP4Q5JQC9 854 aa22.29■■□□□ 1.16
CDKN1B-203ENST00000442489 NLGN2Q8NFZ4 835 aa22.29■■□□□ 1.16
CDKN1B-203ENST00000442489 ATP6V1AP38606 617 aa22.28■■□□□ 1.16
CDKN1B-203ENST00000442489 LINC00116Q8NCU8 138 aa22.28■■□□□ 1.16
CDKN1B-203ENST00000442489 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.27■■□□□ 1.16
CDKN1B-203ENST00000442489 ATG3Q9NT62 314 aa22.27■■□□□ 1.16
CDKN1B-203ENST00000442489 SMIM5Q71RC9 77 aa22.26■■□□□ 1.15
CDKN1B-203ENST00000442489 NUDCQ9Y266 331 aa22.26■■□□□ 1.15
CDKN1B-203ENST00000442489 MRC1P22897 1456 aa22.26■■□□□ 1.15
CDKN1B-203ENST00000442489 U2SURPO15042 1029 aaKnown RBP22.25■■□□□ 1.15
CDKN1B-203ENST00000442489 RALBP1Q15311 655 aa22.25■■□□□ 1.15
CDKN1B-203ENST00000442489 GNPATO15228 680 aa22.24■■□□□ 1.15
CDKN1B-203ENST00000442489 DDX10Q13206 875 aaKnown RBP22.24■■□□□ 1.15
CDKN1B-203ENST00000442489 ITPK1Q13572 414 aa22.24■■□□□ 1.15
CDKN1B-203ENST00000442489 AMIGO3Q86WK7 504 aa22.24■■□□□ 1.15
CDKN1B-203ENST00000442489 ZNF784Q8NCA9 323 aaPredicted RBP22.24■■□□□ 1.15
CDKN1B-203ENST00000442489 RBM42Q9BTD8 480 aaKnown RBP22.24■■□□□ 1.15
CDKN1B-203ENST00000442489 CICQ96RK0 1608 aaPredicted RBP22.24■■□□□ 1.15
CDKN1B-203ENST00000442489 SSFA2P28290 1259 aa22.23■■□□□ 1.15
CDKN1B-203ENST00000442489 CABP4P57796 275 aa22.23■■□□□ 1.15
CDKN1B-203ENST00000442489 MTHFSDQ2M296 383 aaKnown RBP22.23■■□□□ 1.15
CDKN1B-203ENST00000442489 RSPH6AQ9H0K4 717 aa22.22■■□□□ 1.15
CDKN1B-203ENST00000442489 FCHSD2O94868 740 aa22.2■■□□□ 1.14
CDKN1B-203ENST00000442489 GAS2L2Q8NHY3 880 aa22.2■■□□□ 1.14
CDKN1B-203ENST00000442489 CD2APQ9Y5K6 639 aa22.2■■□□□ 1.14
CDKN1B-203ENST00000442489 COL5A3P25940 1745 aaPredicted RBP22.19■■□□□ 1.14
CDKN1B-203ENST00000442489 RNMTO43148 476 aaKnown RBP22.18■■□□□ 1.14
CDKN1B-203ENST00000442489 GRIN3BO60391 1043 aa22.17■■□□□ 1.14
CDKN1B-203ENST00000442489 YBX3P16989 372 aaKnown RBP eCLIP22.17■■□□□ 1.14
CDKN1B-203ENST00000442489 NFATC2IPQ8NCF5 419 aa22.17■■□□□ 1.14
CDKN1B-203ENST00000442489 SLC52A2Q9HAB3 445 aa22.17■■□□□ 1.14
CDKN1B-203ENST00000442489 RTCBQ9Y3I0 505 aaKnown RBP22.17■■□□□ 1.14
CDKN1B-203ENST00000442489 U2AF1L5P0DN76 240 aaPredicted RBP22.16■■□□□ 1.14
CDKN1B-203ENST00000442489 PRKAR2BP31323 418 aa22.16■■□□□ 1.14
CDKN1B-203ENST00000442489 U2AF1Q01081 240 aaKnown RBP eCLIP22.16■■□□□ 1.14
CDKN1B-203ENST00000442489 LGR6Q9HBX8 967 aa22.16■■□□□ 1.14
CDKN1B-203ENST00000442489 SIPA1L3O60292 1781 aaPredicted RBP22.16■■□□□ 1.14
CDKN1B-203ENST00000442489 TRAPPC3LQ5T215 181 aa22.15■■□□□ 1.14
CDKN1B-203ENST00000442489 SLC4A9Q96Q91 983 aa22.15■■□□□ 1.14
CDKN1B-203ENST00000442489 MYBBP1AQ9BQG0 1328 aaKnown RBP22.14■■□□□ 1.14
CDKN1B-203ENST00000442489 GNAT3A8MTJ3 354 aa22.14■■□□□ 1.13
CDKN1B-203ENST00000442489 PTCD1O75127 700 aaKnown RBP22.14■■□□□ 1.13
CDKN1B-203ENST00000442489 UBR2Q8IWV8 1755 aa22.13■■□□□ 1.13
CDKN1B-203ENST00000442489 PHACTR3Q96KR7 559 aa22.13■■□□□ 1.13
CDKN1B-203ENST00000442489 CEMIPQ8WUJ3 1361 aa22.12■■□□□ 1.13
CDKN1B-203ENST00000442489 TJP1Q07157 1748 aa22.12■■□□□ 1.13
CDKN1B-203ENST00000442489 RC3H1Q5TC82 1133 aaKnown RBP22.12■■□□□ 1.13
CDKN1B-203ENST00000442489 CNTNAP4Q9C0A0 1308 aa22.11■■□□□ 1.13
CDKN1B-203ENST00000442489 MMP10P09238 476 aa22.1■■□□□ 1.13
CDKN1B-203ENST00000442489 RFC4P35249 363 aa22.1■■□□□ 1.13
CDKN1B-203ENST00000442489 IL17REQ8NFR9 667 aa22.1■■□□□ 1.13
CDKN1B-203ENST00000442489 WWC3Q9ULE0 1092 aa22.1■■□□□ 1.13
CDKN1B-203ENST00000442489 KCPQ6ZWJ8 1503 aa22.1■■□□□ 1.13
CDKN1B-203ENST00000442489 RPS6KA4O75676 772 aa22.09■■□□□ 1.13
CDKN1B-203ENST00000442489 ADRA2BP18089 450 aa22.09■■□□□ 1.13
CDKN1B-203ENST00000442489 ARHGEF1Q92888 912 aaKnown RBP22.09■■□□□ 1.13
CDKN1B-203ENST00000442489 PNNQ9H307 717 aaKnown RBP22.09■■□□□ 1.13
CDKN1B-203ENST00000442489 HTATSF1O43719 755 aaKnown RBP22.08■■□□□ 1.13
CDKN1B-203ENST00000442489 NLGN1Q8N2Q7 840 aa22.08■■□□□ 1.13
CDKN1B-203ENST00000442489 PLEKHF1Q96S99 279 aa22.08■■□□□ 1.13
CDKN1B-203ENST00000442489 PRKRIP1Q9H875 184 aaPredicted RBP22.08■■□□□ 1.13
CDKN1B-203ENST00000442489 MYH14Q7Z406 1995 aaKnown RBP22.08■■□□□ 1.12
CDKN1B-203ENST00000442489 C4AP0C0L4 1744 aa22.07■■□□□ 1.12
CDKN1B-203ENST00000442489 UTRNP46939 3433 aa22.06■■□□□ 1.12
CDKN1B-203ENST00000442489 CRKLP46109 303 aaKnown RBP22.06■■□□□ 1.12
CDKN1B-203ENST00000442489 VSIG10Q8N0Z9 540 aa22.06■■□□□ 1.12
CDKN1B-203ENST00000442489 DLG5Q8TDM6 1919 aa22.06■■□□□ 1.12
CDKN1B-203ENST00000442489 TEFQ10587 303 aa22.05■■□□□ 1.12
CDKN1B-203ENST00000442489 ZNF316A6NFI3 1004 aaPredicted RBP22.04■■□□□ 1.12
CDKN1B-203ENST00000442489 NEFMP07197 916 aa22.04■■□□□ 1.12
CDKN1B-203ENST00000442489 GYS1P13807 737 aa22.03■■□□□ 1.12
CDKN1B-203ENST00000442489 PARP3Q9Y6F1 533 aa22.03■■□□□ 1.12
CDKN1B-203ENST00000442489 KIF13BQ9NQT8 1826 aa22.03■■□□□ 1.12
CDKN1B-203ENST00000442489 GIGYF1O75420 1035 aaPredicted RBP22.02■■□□□ 1.12
CDKN1B-203ENST00000442489 RTF1Q92541 710 aaKnown RBP22.02■■□□□ 1.12
CDKN1B-203ENST00000442489 CCDC87Q9NVE4 849 aa22.02■■□□□ 1.12
CDKN1B-203ENST00000442489 N4BP2Q86UW6 1770 aaPredicted RBP22.02■■□□□ 1.11
CDKN1B-203ENST00000442489 C1QTNF8P60827 252 aa22.01■■□□□ 1.11
CDKN1B-203ENST00000442489 SLC39A6Q13433 755 aa22.01■■□□□ 1.11
CDKN1B-203ENST00000442489 ZNF790Q6PG37 636 aa22.01■■□□□ 1.11
CDKN1B-203ENST00000442489 DNAJC10Q8IXB1 793 aa22■■□□□ 1.11
CDKN1B-203ENST00000442489 TTC5Q8N0Z6 440 aa21.99■■□□□ 1.11
CDKN1B-203ENST00000442489 SRP68Q9UHB9 627 aaKnown RBP21.99■■□□□ 1.11
CDKN1B-203ENST00000442489 ATP10DQ9P241 1426 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms