RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 THSD7AQ9UPZ6 1657 aa20.52■□□□□ 0.88
MCF2L-217ENST00000441756 GLI3P10071 1580 aa20.52■□□□□ 0.88
MCF2L-217ENST00000441756 NEFLP07196 543 aa20.52■□□□□ 0.88
MCF2L-217ENST00000441756 FAM98CQ17RN3 349 aaKnown RBP20.52■□□□□ 0.88
MCF2L-217ENST00000441756 BTBD11A6QL63 1104 aa20.51■□□□□ 0.87
MCF2L-217ENST00000441756 CABP4P57796 275 aa20.51■□□□□ 0.87
MCF2L-217ENST00000441756 A0A0G2JS52 829 aa20.5■□□□□ 0.87
MCF2L-217ENST00000441756 MYT1Q01538 1121 aa20.5■□□□□ 0.87
MCF2L-217ENST00000441756 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.5■□□□□ 0.87
MCF2L-217ENST00000441756 SUPT16HQ9Y5B9 1047 aaKnown RBP20.5■□□□□ 0.87
MCF2L-217ENST00000441756 CHMP4AQ9BY43 222 aa20.49■□□□□ 0.87
MCF2L-217ENST00000441756 QTRT2Q9H974 415 aaKnown RBP20.49■□□□□ 0.87
MCF2L-217ENST00000441756 TWISTNBQ3B726 338 aaPredicted RBP20.48■□□□□ 0.87
MCF2L-217ENST00000441756 ALDH1L2Q3SY69 923 aa20.46■□□□□ 0.87
MCF2L-217ENST00000441756 MIS18AQ9NYP9 233 aa20.46■□□□□ 0.87
MCF2L-217ENST00000441756 TOGARAM1Q9Y4F4 1720 aa20.46■□□□□ 0.87
MCF2L-217ENST00000441756 RNF123Q5XPI4 1314 aa20.46■□□□□ 0.87
MCF2L-217ENST00000441756 HOXB7P09629 217 aa20.45■□□□□ 0.86
MCF2L-217ENST00000441756 RARSP54136 660 aaKnown RBP20.45■□□□□ 0.86
MCF2L-217ENST00000441756 TTC5Q8N0Z6 440 aa20.45■□□□□ 0.86
MCF2L-217ENST00000441756 NFATC2IPQ8NCF5 419 aa20.45■□□□□ 0.86
MCF2L-217ENST00000441756 TMOD3Q9NYL9 352 aa20.45■□□□□ 0.86
MCF2L-217ENST00000441756 ONECUT3O60422 494 aaPredicted RBP20.44■□□□□ 0.86
MCF2L-217ENST00000441756 RRP1P56182 461 aaKnown RBP20.44■□□□□ 0.86
MCF2L-217ENST00000441756 PAPPAQ13219 1627 aa20.43■□□□□ 0.86
MCF2L-217ENST00000441756 VAMP4O75379 141 aa20.43■□□□□ 0.86
MCF2L-217ENST00000441756 C8orf58Q8NAV2 365 aa20.43■□□□□ 0.86
MCF2L-217ENST00000441756 SMC4Q9NTJ3 1288 aa20.43■□□□□ 0.86
MCF2L-217ENST00000441756 DOT1LQ8TEK3 1739 aa20.43■□□□□ 0.86
MCF2L-217ENST00000441756 EIF4A1P60842 406 aaKnown RBP20.42■□□□□ 0.86
MCF2L-217ENST00000441756 ZNF790Q6PG37 636 aa20.42■□□□□ 0.86
MCF2L-217ENST00000441756 KIF16BQ96L93 1317 aa20.42■□□□□ 0.86
MCF2L-217ENST00000441756 CANXP27824 592 aaKnown RBP20.41■□□□□ 0.86
MCF2L-217ENST00000441756 RBM6P78332 1123 aaKnown RBP20.41■□□□□ 0.86
MCF2L-217ENST00000441756 TSPYL6Q8N831 410 aa20.41■□□□□ 0.86
MCF2L-217ENST00000441756 MARCH10Q8NA82 808 aaPredicted RBP20.41■□□□□ 0.86
MCF2L-217ENST00000441756 ELL2O00472 640 aaPredicted RBP20.4■□□□□ 0.86
MCF2L-217ENST00000441756 ITGB4P16144 1822 aa20.39■□□□□ 0.86
MCF2L-217ENST00000441756 BCL9O00512 1426 aa20.39■□□□□ 0.85
MCF2L-217ENST00000441756 SEPT12Q8IYM1 358 aa20.39■□□□□ 0.85
MCF2L-217ENST00000441756 FMNL2Q96PY5 1086 aa20.39■□□□□ 0.85
MCF2L-217ENST00000441756 CCDC30Q5VVM6 783 aa20.38■□□□□ 0.85
MCF2L-217ENST00000441756 SSH1Q8WYL5 1049 aa20.38■□□□□ 0.85
MCF2L-217ENST00000441756 STK31Q9BXU1 1019 aa20.38■□□□□ 0.85
MCF2L-217ENST00000441756 HEG1Q9ULI3 1381 aa20.37■□□□□ 0.85
MCF2L-217ENST00000441756 UBR2Q8IWV8 1755 aa20.37■□□□□ 0.85
MCF2L-217ENST00000441756 IPO8O15397 1037 aaKnown RBP20.37■□□□□ 0.85
MCF2L-217ENST00000441756 BCAR3O75815 825 aa20.37■□□□□ 0.85
MCF2L-217ENST00000441756 MS4A1P11836 297 aa20.37■□□□□ 0.85
MCF2L-217ENST00000441756 BRPF1P55201 1214 aaPredicted RBP20.37■□□□□ 0.85
MCF2L-217ENST00000441756 KRT24Q2M2I5 525 aa20.37■□□□□ 0.85
MCF2L-217ENST00000441756 SLC39A6Q13433 755 aa20.36■□□□□ 0.85
MCF2L-217ENST00000441756 SYTL4Q96C24 671 aaPredicted RBP20.36■□□□□ 0.85
MCF2L-217ENST00000441756 BCL2L13Q9BXK5 485 aa20.36■□□□□ 0.85
MCF2L-217ENST00000441756 KCNQ3O43525 872 aa20.35■□□□□ 0.85
MCF2L-217ENST00000441756 HDGFL1Q5TGJ6 251 aa20.35■□□□□ 0.85
MCF2L-217ENST00000441756 PIGBQ92521 554 aa20.35■□□□□ 0.85
MCF2L-217ENST00000441756 GIGYF1O75420 1035 aaPredicted RBP20.34■□□□□ 0.85
MCF2L-217ENST00000441756 SNRPA1P09661 255 aaKnown RBP20.34■□□□□ 0.85
MCF2L-217ENST00000441756 PRIM1P49642 420 aaKnown RBP20.34■□□□□ 0.85
MCF2L-217ENST00000441756 ZKSCAN2Q63HK3 967 aa20.34■□□□□ 0.85
MCF2L-217ENST00000441756 FRAT1Q92837 279 aaPredicted RBP20.34■□□□□ 0.85
MCF2L-217ENST00000441756 LAMB4A4D0S4 1761 aa20.34■□□□□ 0.85
MCF2L-217ENST00000441756 KCPQ6ZWJ8 1503 aa20.33■□□□□ 0.85
MCF2L-217ENST00000441756 RXRBP28702 533 aa20.33■□□□□ 0.85
MCF2L-217ENST00000441756 ERICH6BQ5W0A0 696 aa20.33■□□□□ 0.85
MCF2L-217ENST00000441756 MRPL50Q8N5N7 158 aaKnown RBP20.33■□□□□ 0.85
MCF2L-217ENST00000441756 ZNF496Q96IT1 587 aaPredicted RBP20.33■□□□□ 0.85
MCF2L-217ENST00000441756 NHSQ6T4R5 1651 aa20.32■□□□□ 0.84
MCF2L-217ENST00000441756 FKBP8Q14318 412 aa20.31■□□□□ 0.84
MCF2L-217ENST00000441756 PDE3AQ14432 1141 aa20.31■□□□□ 0.84
MCF2L-217ENST00000441756 ARHGAP45Q92619 1136 aa20.31■□□□□ 0.84
MCF2L-217ENST00000441756 SMARCC1Q92922 1105 aaPredicted RBP20.31■□□□□ 0.84
MCF2L-217ENST00000441756 ACSBG1Q96GR2 724 aa20.31■□□□□ 0.84
MCF2L-217ENST00000441756 GTF3C3Q9Y5Q9 886 aa20.31■□□□□ 0.84
MCF2L-217ENST00000441756 CACNA1FO60840 1977 aa20.3■□□□□ 0.84
MCF2L-217ENST00000441756 C5P01031 1676 aa20.3■□□□□ 0.84
MCF2L-217ENST00000441756 PLIN1O60240 522 aa20.3■□□□□ 0.84
MCF2L-217ENST00000441756 KRT27Q7Z3Y8 459 aa20.3■□□□□ 0.84
MCF2L-217ENST00000441756 VSIG10Q8N0Z9 540 aa20.3■□□□□ 0.84
MCF2L-217ENST00000441756 PTPRCP08575 1304 aa20.29■□□□□ 0.84
MCF2L-217ENST00000441756 TEX13AQ9BXU3 409 aaPredicted RBP20.29■□□□□ 0.84
MCF2L-217ENST00000441756 ATG3Q9NT62 314 aa20.29■□□□□ 0.84
MCF2L-217ENST00000441756 SLC4A2P04920 1241 aa20.28■□□□□ 0.84
MCF2L-217ENST00000441756 EIF2S2P20042 333 aaKnown RBP20.28■□□□□ 0.84
MCF2L-217ENST00000441756 ATF7IPQ6VMQ6 1270 aa20.28■□□□□ 0.84
MCF2L-217ENST00000441756 FTSJ3Q8IY81 847 aaKnown RBP20.28■□□□□ 0.84
MCF2L-217ENST00000441756 API5Q9BZZ5 524 aaKnown RBP20.28■□□□□ 0.84
MCF2L-217ENST00000441756 DBF4Q9UBU7 674 aaPredicted RBP20.28■□□□□ 0.84
MCF2L-217ENST00000441756 ASAP1Q9ULH1 1129 aa20.28■□□□□ 0.84
MCF2L-217ENST00000441756 NOB1Q9ULX3 412 aaKnown RBP20.28■□□□□ 0.84
MCF2L-217ENST00000441756 ERBB4Q15303 1308 aa20.27■□□□□ 0.84
MCF2L-217ENST00000441756 PTCD1O75127 700 aaKnown RBP20.27■□□□□ 0.84
MCF2L-217ENST00000441756 FAM196AQ6ZSG2 479 aa20.27■□□□□ 0.84
MCF2L-217ENST00000441756 BRWD3Q6RI45 1802 aa20.27■□□□□ 0.84
MCF2L-217ENST00000441756 TCERG1O14776 1098 aaKnown RBP20.26■□□□□ 0.83
MCF2L-217ENST00000441756 IRX6P78412 446 aaPredicted RBP20.26■□□□□ 0.83
MCF2L-217ENST00000441756 KAT6BQ8WYB5 2073 aa20.25■□□□□ 0.83
MCF2L-217ENST00000441756 CICQ96RK0 1608 aaPredicted RBP20.25■□□□□ 0.83
MCF2L-217ENST00000441756 DZIP1LQ8IYY4 767 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 242.9 ms