RNA–Protein interactions for RNA: ENST00000441738.1

TIMP1-203, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 5

Gene TIMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-203ENST00000441738 MTFR1LQ9H019 292 aa11.11□□□□□ -0.63
TIMP1-203ENST00000441738 C4AP0C0L4 1744 aa11.11□□□□□ -0.63
TIMP1-203ENST00000441738 MTHFSDQ2M296 383 aaKnown RBP11.1□□□□□ -0.63
TIMP1-203ENST00000441738 ARXQ96QS3 562 aa11.1□□□□□ -0.63
TIMP1-203ENST00000441738 LRRC4BQ9NT99 713 aa11.1□□□□□ -0.63
TIMP1-203ENST00000441738 MAP3K5Q99683 1374 aa11.09□□□□□ -0.63
TIMP1-203ENST00000441738 ZNF530Q6P9A1 599 aaPredicted RBP11.09□□□□□ -0.63
TIMP1-203ENST00000441738 PLEKHF1Q96S99 279 aa11.09□□□□□ -0.63
TIMP1-203ENST00000441738 SGIP1Q9BQI5 828 aa11.09□□□□□ -0.63
TIMP1-203ENST00000441738 SPG7Q9UQ90 795 aa11.09□□□□□ -0.63
TIMP1-203ENST00000441738 U2SURPO15042 1029 aaKnown RBP11.08□□□□□ -0.64
TIMP1-203ENST00000441738 PRKAR2BP31323 418 aa11.08□□□□□ -0.64
TIMP1-203ENST00000441738 COL13A1Q5TAT6 717 aaPredicted RBP11.08□□□□□ -0.64
TIMP1-203ENST00000441738 IFNL2Q8IZJ0 200 aa11.08□□□□□ -0.64
TIMP1-203ENST00000441738 PELP1Q8IZL8 1130 aaKnown RBP11.08□□□□□ -0.64
TIMP1-203ENST00000441738 PIGBQ92521 554 aa11.08□□□□□ -0.64
TIMP1-203ENST00000441738 STK32BQ9NY57 414 aa11.08□□□□□ -0.64
TIMP1-203ENST00000441738 LAMB4A4D0S4 1761 aa11.08□□□□□ -0.64
TIMP1-203ENST00000441738 KCNQ4P56696 695 aa11.07□□□□□ -0.64
TIMP1-203ENST00000441738 TXNRD1Q16881 649 aa11.07□□□□□ -0.64
TIMP1-203ENST00000441738 PLEKHO1Q53GL0 409 aaPredicted RBP11.07□□□□□ -0.64
TIMP1-203ENST00000441738 LGR6Q9HBX8 967 aa11.07□□□□□ -0.64
TIMP1-203ENST00000441738 GPBP1L1Q9HC44 474 aaPredicted RBP11.07□□□□□ -0.64
TIMP1-203ENST00000441738 PCDH10Q9P2E7 1040 aa11.07□□□□□ -0.64
TIMP1-203ENST00000441738 CEMIPQ8WUJ3 1361 aa11.06□□□□□ -0.64
TIMP1-203ENST00000441738 PALLDQ8WX93 1383 aa11.06□□□□□ -0.64
TIMP1-203ENST00000441738 AMOTQ4VCS5 1084 aa11.06□□□□□ -0.64
TIMP1-203ENST00000441738 MPRIPQ6WCQ1 1025 aa11.06□□□□□ -0.64
TIMP1-203ENST00000441738 TNS4Q8IZW8 715 aa11.06□□□□□ -0.64
TIMP1-203ENST00000441738 CFAP53Q96M91 514 aa11.06□□□□□ -0.64
TIMP1-203ENST00000441738 SLC4A9Q96Q91 983 aa11.06□□□□□ -0.64
TIMP1-203ENST00000441738 U2AF1L5P0DN76 240 aaPredicted RBP11.05□□□□□ -0.64
TIMP1-203ENST00000441738 U2AF1Q01081 240 aaKnown RBP eCLIP11.05□□□□□ -0.64
TIMP1-203ENST00000441738 SLC15A2Q16348 729 aa11.05□□□□□ -0.64
TIMP1-203ENST00000441738 ZNF827Q17R98 1081 aa11.05□□□□□ -0.64
TIMP1-203ENST00000441738 SYTL4Q96C24 671 aaPredicted RBP11.05□□□□□ -0.64
TIMP1-203ENST00000441738 DCAF5Q96JK2 942 aa11.05□□□□□ -0.64
TIMP1-203ENST00000441738 ATP10DQ9P241 1426 aa11.05□□□□□ -0.64
TIMP1-203ENST00000441738 ASAP1Q9ULH1 1129 aa11.05□□□□□ -0.64
TIMP1-203ENST00000441738 AKAP4Q5JQC9 854 aa11.04□□□□□ -0.64
TIMP1-203ENST00000441738 AMIGO3Q86WK7 504 aa11.04□□□□□ -0.64
TIMP1-203ENST00000441738 IL17REQ8NFR9 667 aa11.04□□□□□ -0.64
TIMP1-203ENST00000441738 ATG3Q9NT62 314 aa11.04□□□□□ -0.64
TIMP1-203ENST00000441738 RNMTO43148 476 aaKnown RBP11.03□□□□□ -0.64
TIMP1-203ENST00000441738 FCHSD2O94868 740 aa11.03□□□□□ -0.64
TIMP1-203ENST00000441738 APLP1P51693 650 aa11.03□□□□□ -0.64
TIMP1-203ENST00000441738 KLHL34Q8N239 644 aa11.03□□□□□ -0.64
TIMP1-203ENST00000441738 AKT1S1Q96B36 256 aa11.03□□□□□ -0.64
TIMP1-203ENST00000441738 ERVV-2B6SEH9 535 aa11.02□□□□□ -0.65
TIMP1-203ENST00000441738 GRIN3BO60391 1043 aa11.02□□□□□ -0.65
TIMP1-203ENST00000441738 ITPK1Q13572 414 aa11.02□□□□□ -0.65
TIMP1-203ENST00000441738 DNAJC5GQ8N7S2 189 aa11.02□□□□□ -0.65
TIMP1-203ENST00000441738 BCORQ6W2J9 1755 aa11.01□□□□□ -0.65
TIMP1-203ENST00000441738 C1orf141Q5JVX7 400 aa11.01□□□□□ -0.65
TIMP1-203ENST00000441738 NFATC2IPQ8NCF5 419 aa11.01□□□□□ -0.65
TIMP1-203ENST00000441738 SLC52A2Q9HAB3 445 aa11.01□□□□□ -0.65
TIMP1-203ENST00000441738 TMOD3Q9NYL9 352 aa11.01□□□□□ -0.65
TIMP1-203ENST00000441738 NUDCQ9Y266 331 aa11.01□□□□□ -0.65
TIMP1-203ENST00000441738 HSP90AB1P08238 724 aaKnown RBP11□□□□□ -0.65
TIMP1-203ENST00000441738 DCTN1Q14203 1278 aa11□□□□□ -0.65
TIMP1-203ENST00000441738 ADAMTS8Q9UP79 889 aa11□□□□□ -0.65
TIMP1-203ENST00000441738 SCN7AQ01118 1682 aa11□□□□□ -0.65
TIMP1-203ENST00000441738 KIAA1551Q9HCM1 1747 aa11□□□□□ -0.65
TIMP1-203ENST00000441738 GNAT3A8MTJ3 354 aa10.99□□□□□ -0.65
TIMP1-203ENST00000441738 SLC27A3Q5K4L6 730 aa10.99□□□□□ -0.65
TIMP1-203ENST00000441738 LINC00116Q8NCU8 138 aa10.99□□□□□ -0.65
TIMP1-203ENST00000441738 GAS2L2Q8NHY3 880 aa10.99□□□□□ -0.65
TIMP1-203ENST00000441738 ZNF526Q8TF50 670 aaPredicted RBP10.99□□□□□ -0.65
TIMP1-203ENST00000441738 CCNL1Q9UK58 526 aaPredicted RBP10.99□□□□□ -0.65
TIMP1-203ENST00000441738 PNPLA7Q6ZV29 1317 aa10.99□□□□□ -0.65
TIMP1-203ENST00000441738 LOC102724428A0A0B4J2F2 783 aa10.98□□□□□ -0.65
TIMP1-203ENST00000441738 SIK1P57059 783 aa10.98□□□□□ -0.65
TIMP1-203ENST00000441738 SLC39A6Q13433 755 aa10.98□□□□□ -0.65
TIMP1-203ENST00000441738 SMIM5Q71RC9 77 aa10.98□□□□□ -0.65
TIMP1-203ENST00000441738 MCM10Q7L590 875 aa10.98□□□□□ -0.65
TIMP1-203ENST00000441738 CCDC146Q8IYE0 955 aa10.98□□□□□ -0.65
TIMP1-203ENST00000441738 KCNQ3O43525 872 aa10.97□□□□□ -0.65
TIMP1-203ENST00000441738 YBX3P16989 372 aaKnown RBP eCLIP10.97□□□□□ -0.657e-10■■□□□ 13.9
TIMP1-203ENST00000441738 CABP4P57796 275 aa10.97□□□□□ -0.65
TIMP1-203ENST00000441738 NFE2L2Q16236 605 aa10.97□□□□□ -0.65
TIMP1-203ENST00000441738 PNISRQ8TF01 805 aaKnown RBP10.97□□□□□ -0.65
TIMP1-203ENST00000441738 THUMPD2Q9BTF0 503 aaKnown RBP10.97□□□□□ -0.65
TIMP1-203ENST00000441738 KIF13BQ9NQT8 1826 aa10.97□□□□□ -0.65
TIMP1-203ENST00000441738 AFDNP55196 1824 aaKnown RBP10.96□□□□□ -0.65
TIMP1-203ENST00000441738 POLD1P28340 1107 aa10.96□□□□□ -0.65
TIMP1-203ENST00000441738 NLGN2Q8NFZ4 835 aa10.96□□□□□ -0.65
TIMP1-203ENST00000441738 SMARCC1Q92922 1105 aaPredicted RBP10.96□□□□□ -0.65
TIMP1-203ENST00000441738 TRIM35Q9UPQ4 493 aa10.96□□□□□ -0.65
TIMP1-203ENST00000441738 HEG1Q9ULI3 1381 aa10.95□□□□□ -0.66
TIMP1-203ENST00000441738 TMPOP42166 694 aaKnown RBP10.95□□□□□ -0.66
TIMP1-203ENST00000441738 RRP7AQ9Y3A4 280 aaKnown RBP10.95□□□□□ -0.66
TIMP1-203ENST00000441738 KIF3CO14782 793 aa10.94□□□□□ -0.66
TIMP1-203ENST00000441738 ZNF496Q96IT1 587 aaPredicted RBP10.94□□□□□ -0.66
TIMP1-203ENST00000441738 NRXN2Q9P2S2 1712 aa10.94□□□□□ -0.66
TIMP1-203ENST00000441738 BRCA1P38398 1863 aaKnown RBP10.93□□□□□ -0.66
TIMP1-203ENST00000441738 ADCY9O60503 1353 aa10.93□□□□□ -0.66
TIMP1-203ENST00000441738 CNTNAP4Q9C0A0 1308 aa10.93□□□□□ -0.66
TIMP1-203ENST00000441738 PRAMEF22A3QJZ6 481 aa10.93□□□□□ -0.66
TIMP1-203ENST00000441738 ANP32CO43423 234 aa10.93□□□□□ -0.66
TIMP1-203ENST00000441738 HTATSF1O43719 755 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms