RNA–Protein interactions for RNA: ENST00000441588.5

RPE-212, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 4

Gene RPE, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-212ENST00000441588 CTCFP49711 727 aaPredicted RBP13.18□□□□□ -0.3
RPE-212ENST00000441588 LBX1P52954 281 aa13.18□□□□□ -0.3
RPE-212ENST00000441588 SMARCC1Q92922 1105 aaPredicted RBP13.18□□□□□ -0.3
RPE-212ENST00000441588 KDM6AO15550 1401 aaPredicted RBP13.18□□□□□ -0.3
RPE-212ENST00000441588 COL5A3P25940 1745 aaPredicted RBP13.18□□□□□ -0.3
RPE-212ENST00000441588 PCDH11XQ9BZA7 1347 aa13.17□□□□□ -0.3
RPE-212ENST00000441588 PCDH11YQ9BZA8 1340 aa13.17□□□□□ -0.3
RPE-212ENST00000441588 EDC4Q6P2E9 1401 aaKnown RBP13.17□□□□□ -0.3
RPE-212ENST00000441588 LOC102724428A0A0B4J2F2 783 aa13.17□□□□□ -0.3
RPE-212ENST00000441588 VEGFAP15692 232 aaPredicted RBP13.17□□□□□ -0.3
RPE-212ENST00000441588 SIK1P57059 783 aa13.17□□□□□ -0.3
RPE-212ENST00000441588 NBPF6Q5VWK0 638 aa13.17□□□□□ -0.3
RPE-212ENST00000441588 NBPF4Q96M43 638 aa13.17□□□□□ -0.3
RPE-212ENST00000441588 CNTNAP1P78357 1384 aa13.17□□□□□ -0.3
RPE-212ENST00000441588 DALRD3Q5D0E6 543 aaKnown RBP13.16□□□□□ -0.3
RPE-212ENST00000441588 PIGBQ92521 554 aa13.16□□□□□ -0.3
RPE-212ENST00000441588 AIDAQ96BJ3 306 aa13.16□□□□□ -0.3
RPE-212ENST00000441588 CREBZFQ9NS37 354 aa13.16□□□□□ -0.3
RPE-212ENST00000441588 PIM2Q9P1W9 311 aa13.16□□□□□ -0.3
RPE-212ENST00000441588 MYH14Q7Z406 1995 aaKnown RBP13.16□□□□□ -0.3
RPE-212ENST00000441588 CYP27B1O15528 508 aa13.15□□□□□ -0.3
RPE-212ENST00000441588 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
RPE-212ENST00000441588 CHRNA5P30532 468 aa13.15□□□□□ -0.3
RPE-212ENST00000441588 TMF1P82094 1093 aa13.15□□□□□ -0.3
RPE-212ENST00000441588 RAPGEF4Q8WZA2 1011 aa13.15□□□□□ -0.3
RPE-212ENST00000441588 GLTPD2A6NH11 291 aa13.14□□□□□ -0.31
RPE-212ENST00000441588 CCDC85CA6NKD9 419 aa13.14□□□□□ -0.31
RPE-212ENST00000441588 POTECB2RU33 542 aa13.14□□□□□ -0.31
RPE-212ENST00000441588 TNRC18O15417 2968 aaPredicted RBP13.14□□□□□ -0.31
RPE-212ENST00000441588 AMPHP49418 695 aa13.14□□□□□ -0.31
RPE-212ENST00000441588 A0A1W2PP64 1363 aa13.14□□□□□ -0.31
RPE-212ENST00000441588 DLEC1Q9Y238 1755 aa13.14□□□□□ -0.31
RPE-212ENST00000441588 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
RPE-212ENST00000441588 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
RPE-212ENST00000441588 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
RPE-212ENST00000441588 POTEJP0CG39 1038 aa13.13□□□□□ -0.31
RPE-212ENST00000441588 HSPA8P11142 646 aaKnown RBP13.13□□□□□ -0.31
RPE-212ENST00000441588 GYS1P13807 737 aa13.13□□□□□ -0.31
RPE-212ENST00000441588 TATP17735 454 aaPredicted RBP13.13□□□□□ -0.31
RPE-212ENST00000441588 PARP3Q9Y6F1 533 aa13.13□□□□□ -0.31
RPE-212ENST00000441588 DICER1Q9UPY3 1922 aaKnown RBP13.13□□□□□ -0.31
RPE-212ENST00000441588 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
RPE-212ENST00000441588 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
RPE-212ENST00000441588 ASAP1Q9ULH1 1129 aa13.12□□□□□ -0.31
RPE-212ENST00000441588 AFDNP55196 1824 aaKnown RBP13.11□□□□□ -0.31
RPE-212ENST00000441588 KDRP35968 1356 aa13.11□□□□□ -0.31
RPE-212ENST00000441588 VEGFBP49765 207 aa13.11□□□□□ -0.31
RPE-212ENST00000441588 TMC1Q8TDI8 760 aa13.11□□□□□ -0.31
RPE-212ENST00000441588 RTL1A6NKG5 1358 aa13.1□□□□□ -0.31
RPE-212ENST00000441588 RGS19P49795 217 aa13.1□□□□□ -0.31
RPE-212ENST00000441588 DDR1Q08345 913 aa13.1□□□□□ -0.31
RPE-212ENST00000441588 TRAPPC3LQ5T215 181 aa13.1□□□□□ -0.31
RPE-212ENST00000441588 ARHGEF1Q92888 912 aaKnown RBP13.1□□□□□ -0.31
RPE-212ENST00000441588 SLC12A5Q9H2X9 1139 aa13.1□□□□□ -0.31
RPE-212ENST00000441588 WBP1LQ9NX94 342 aa13.1□□□□□ -0.31
RPE-212ENST00000441588 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
RPE-212ENST00000441588 LMNB1P20700 586 aa13.09□□□□□ -0.31
RPE-212ENST00000441588 RRS1Q15050 365 aaKnown RBP13.09□□□□□ -0.31
RPE-212ENST00000441588 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
RPE-212ENST00000441588 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
RPE-212ENST00000441588 SMG6Q86US8 1419 aaKnown RBP13.09□□□□□ -0.31
RPE-212ENST00000441588 ZNF831Q5JPB2 1677 aa13.08□□□□□ -0.31
RPE-212ENST00000441588 SLC4A9Q96Q91 983 aa13.07□□□□□ -0.32
RPE-212ENST00000441588 TMOD3Q9NYL9 352 aa13.07□□□□□ -0.32
RPE-212ENST00000441588 SRP68Q9UHB9 627 aaKnown RBP13.07□□□□□ -0.32
RPE-212ENST00000441588 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
RPE-212ENST00000441588 THSD7BQ9C0I4 1608 aa13.06□□□□□ -0.32
RPE-212ENST00000441588 ADAMTS7Q9UKP4 1686 aa13.06□□□□□ -0.32
RPE-212ENST00000441588 RFC4P35249 363 aa13.06□□□□□ -0.32
RPE-212ENST00000441588 CFAP44Q96MT7 982 aa13.06□□□□□ -0.32
RPE-212ENST00000441588 ATG3Q9NT62 314 aa13.06□□□□□ -0.32
RPE-212ENST00000441588 PASKQ96RG2 1323 aa13.06□□□□□ -0.32
RPE-212ENST00000441588 NFKBIEO00221 500 aa13.05□□□□□ -0.32
RPE-212ENST00000441588 FKBP8Q14318 412 aa13.05□□□□□ -0.32
RPE-212ENST00000441588 COG3Q96JB2 828 aa13.05□□□□□ -0.32
RPE-212ENST00000441588 CACNA1SQ13698 1873 aa13.05□□□□□ -0.32
RPE-212ENST00000441588 FER1L6Q2WGJ9 1857 aa13.05□□□□□ -0.32
RPE-212ENST00000441588 ADRA2BP18089 450 aa13.04□□□□□ -0.32
RPE-212ENST00000441588 NRXN2Q9P2S2 1712 aa13.04□□□□□ -0.32
RPE-212ENST00000441588 TJP1Q07157 1748 aa13.03□□□□□ -0.32
RPE-212ENST00000441588 LTBP1Q14766 1721 aa13.03□□□□□ -0.32
RPE-212ENST00000441588 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
RPE-212ENST00000441588 CNTNAP4Q9C0A0 1308 aa13.03□□□□□ -0.32
RPE-212ENST00000441588 CASP8AP2Q9UKL3 1982 aa13.03□□□□□ -0.32
RPE-212ENST00000441588 COL11A2P13942 1736 aaPredicted RBP13.02□□□□□ -0.32
RPE-212ENST00000441588 RPS6KA4O75676 772 aa13.02□□□□□ -0.33
RPE-212ENST00000441588 HSP90AB2PQ58FF8 381 aa13.02□□□□□ -0.33
RPE-212ENST00000441588 RBM42Q9BTD8 480 aaKnown RBP13.02□□□□□ -0.33
RPE-212ENST00000441588 TERF2IPQ9NYB0 399 aa13.02□□□□□ -0.33
RPE-212ENST00000441588 USP42Q9H9J4 1324 aaKnown RBP13.02□□□□□ -0.33
RPE-212ENST00000441588 SCN4AP35499 1836 aa13.02□□□□□ -0.33
RPE-212ENST00000441588 KIF20BQ96Q89 1820 aa13.02□□□□□ -0.33
RPE-212ENST00000441588 TMEM88BA6NKF7 163 aa13.01□□□□□ -0.33
RPE-212ENST00000441588 POLRMTO00411 1230 aaKnown RBP13.01□□□□□ -0.33
RPE-212ENST00000441588 INSRP06213 1382 aa13.01□□□□□ -0.33
RPE-212ENST00000441588 ADAMTSL1Q8N6G6 1762 aa13.01□□□□□ -0.33
RPE-212ENST00000441588 ANKRD31Q8N7Z5 1873 aa13.01□□□□□ -0.33
RPE-212ENST00000441588 NCAPD2Q15021 1401 aa13□□□□□ -0.33
RPE-212ENST00000441588 DDNO94850 711 aaPredicted RBP13□□□□□ -0.33
RPE-212ENST00000441588 RC3H1Q5TC82 1133 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 370.1 ms