RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 RBM33Q96EV2 1170 aaKnown RBP17.18■□□□□ 0.34
PCNX1-202ENST00000439984 FEZ1Q99689 392 aa17.18■□□□□ 0.34
PCNX1-202ENST00000439984 MAGEC2Q9UBF1 373 aaPredicted RBP17.18■□□□□ 0.34
PCNX1-202ENST00000439984 GNAI3P08754 354 aa17.18■□□□□ 0.34
PCNX1-202ENST00000439984 CCDC141Q6ZP82 1450 aa17.18■□□□□ 0.34
PCNX1-202ENST00000439984 MCM6Q14566 821 aa17.17■□□□□ 0.34
PCNX1-202ENST00000439984 NGDNQ8NEJ9 315 aaKnown RBP17.17■□□□□ 0.34
PCNX1-202ENST00000439984 TEFQ10587 303 aa17.17■□□□□ 0.34
PCNX1-202ENST00000439984 ENOX2Q16206 610 aaKnown RBP17.17■□□□□ 0.34
PCNX1-202ENST00000439984 RAB3GAP1Q15042 981 aa17.17■□□□□ 0.34
PCNX1-202ENST00000439984 KRBA2Q6ZNG9 492 aa17.17■□□□□ 0.34
PCNX1-202ENST00000439984 ANO10Q9NW15 660 aa17.17■□□□□ 0.34
PCNX1-202ENST00000439984 PLEKHH2Q8IVE3 1493 aa17.17■□□□□ 0.34
PCNX1-202ENST00000439984 ANKRD1Q15327 319 aa17.17■□□□□ 0.34
PCNX1-202ENST00000439984 BLOC1S2Q6QNY1 142 aa17.17■□□□□ 0.34
PCNX1-202ENST00000439984 TFIP11Q9UBB9 837 aaKnown RBP17.17■□□□□ 0.34
PCNX1-202ENST00000439984 KIF5CO60282 957 aa17.17■□□□□ 0.34
PCNX1-202ENST00000439984 NF2P35240 595 aa17.17■□□□□ 0.34
PCNX1-202ENST00000439984 ZNF165P49910 485 aa17.17■□□□□ 0.34
PCNX1-202ENST00000439984 CCDC148Q8NFR7 591 aa17.17■□□□□ 0.34
PCNX1-202ENST00000439984 CAPN2P17655 700 aa17.16■□□□□ 0.34
PCNX1-202ENST00000439984 ZSCAN31Q96LW9 406 aaPredicted RBP17.16■□□□□ 0.34
PCNX1-202ENST00000439984 MYO6Q9UM54 1294 aa17.16■□□□□ 0.34
PCNX1-202ENST00000439984 TOP1P11387 765 aaKnown RBP17.16■□□□□ 0.34
PCNX1-202ENST00000439984 CTR9Q6PD62 1173 aa17.16■□□□□ 0.34
PCNX1-202ENST00000439984 GAS2L2Q8NHY3 880 aa17.16■□□□□ 0.34
PCNX1-202ENST00000439984 NEMFO60524 1076 aa17.16■□□□□ 0.34
PCNX1-202ENST00000439984 SLC4A2P04920 1241 aa17.16■□□□□ 0.34
PCNX1-202ENST00000439984 EPS15P42566 896 aa17.16■□□□□ 0.34
PCNX1-202ENST00000439984 ERICH2A1L162 156 aa17.16■□□□□ 0.34
PCNX1-202ENST00000439984 CERS3Q8IU89 383 aa17.16■□□□□ 0.34
PCNX1-202ENST00000439984 PTGS1P23219 599 aa17.15■□□□□ 0.34
PCNX1-202ENST00000439984 KIF14Q15058 1648 aa17.15■□□□□ 0.34
PCNX1-202ENST00000439984 GPATCH8Q9UKJ3 1502 aaKnown RBP17.15■□□□□ 0.34
PCNX1-202ENST00000439984 RIOK3O14730 519 aaKnown RBP17.15■□□□□ 0.34
PCNX1-202ENST00000439984 TDO2P48775 406 aa17.15■□□□□ 0.34
PCNX1-202ENST00000439984 SKILP12757 684 aa17.15■□□□□ 0.34
PCNX1-202ENST00000439984 KIAA1328Q86T90 577 aa17.15■□□□□ 0.34
PCNX1-202ENST00000439984 INCENPQ9NQS7 918 aa17.15■□□□□ 0.34
PCNX1-202ENST00000439984 EXOC6BQ9Y2D4 811 aa17.15■□□□□ 0.34
PCNX1-202ENST00000439984 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
PCNX1-202ENST00000439984 MAP9Q49MG5 647 aa17.15■□□□□ 0.34
PCNX1-202ENST00000439984 DRC1Q96MC2 740 aa17.15■□□□□ 0.34
PCNX1-202ENST00000439984 IVLP07476 585 aa17.14■□□□□ 0.34
PCNX1-202ENST00000439984 AIMP1Q12904 312 aaKnown RBP17.14■□□□□ 0.34
PCNX1-202ENST00000439984 SSH1Q8WYL5 1049 aa17.14■□□□□ 0.34
PCNX1-202ENST00000439984 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
PCNX1-202ENST00000439984 MYRIPQ8NFW9 859 aa17.14■□□□□ 0.33
PCNX1-202ENST00000439984 SLC12A5Q9H2X9 1139 aa17.14■□□□□ 0.33
PCNX1-202ENST00000439984 USP48Q86UV5 1035 aa17.14■□□□□ 0.33
PCNX1-202ENST00000439984 DACH1Q9UI36 760 aa17.14■□□□□ 0.33
PCNX1-202ENST00000439984 IQCEQ6IPM2 695 aa17.14■□□□□ 0.33
PCNX1-202ENST00000439984 CNPY2Q9Y2B0 182 aa17.14■□□□□ 0.33
PCNX1-202ENST00000439984 ATP2C2O75185 946 aa17.14■□□□□ 0.33
PCNX1-202ENST00000439984 JMYQ8N9B5 988 aa17.14■□□□□ 0.33
PCNX1-202ENST00000439984 CPLX3Q8WVH0 158 aa17.14■□□□□ 0.33
PCNX1-202ENST00000439984 DNAI1Q9UI46 699 aa17.14■□□□□ 0.33
PCNX1-202ENST00000439984 SLU7O95391 586 aaKnown RBP17.13■□□□□ 0.33
PCNX1-202ENST00000439984 NUTM1Q86Y26 1132 aa17.13■□□□□ 0.33
PCNX1-202ENST00000439984 GBP2P32456 591 aaPredicted RBP17.13■□□□□ 0.33
PCNX1-202ENST00000439984 UBE2HP62256 183 aa17.13■□□□□ 0.33
PCNX1-202ENST00000439984 RNF216Q9NWF9 866 aaPredicted RBP17.13■□□□□ 0.33
PCNX1-202ENST00000439984 BIN1O00499 593 aa17.13■□□□□ 0.33
PCNX1-202ENST00000439984 ARFGAP3Q9NP61 516 aa17.13■□□□□ 0.33
PCNX1-202ENST00000439984 ERLIN2O94905 339 aa17.13■□□□□ 0.33
PCNX1-202ENST00000439984 GNG11P61952 73 aa17.13■□□□□ 0.33
PCNX1-202ENST00000439984 PCDHB15Q9Y5E8 787 aa17.13■□□□□ 0.33
PCNX1-202ENST00000439984 SIL1Q9H173 461 aa17.12■□□□□ 0.33
PCNX1-202ENST00000439984 NUP153P49790 1475 aaKnown RBP17.12■□□□□ 0.33
PCNX1-202ENST00000439984 GSDMDP57764 484 aa17.12■□□□□ 0.33
PCNX1-202ENST00000439984 MICALCLQ6ZW33 695 aa17.12■□□□□ 0.33
PCNX1-202ENST00000439984 ZRSR2Q15696 482 aaKnown RBP17.12■□□□□ 0.33
PCNX1-202ENST00000439984 SCAND2PQ9GZW5 306 aaPredicted RBP17.12■□□□□ 0.33
PCNX1-202ENST00000439984 VPS18Q9P253 973 aa17.12■□□□□ 0.33
PCNX1-202ENST00000439984 STX6O43752 255 aa17.12■□□□□ 0.33
PCNX1-202ENST00000439984 ANO6Q4KMQ2 910 aa17.12■□□□□ 0.33
PCNX1-202ENST00000439984 BCCIPQ9P287 314 aaKnown RBP eCLIP17.12■□□□□ 0.33
PCNX1-202ENST00000439984 PRPF40BQ6NWY9 871 aaKnown RBP17.11■□□□□ 0.33
PCNX1-202ENST00000439984 HIP1O00291 1037 aa17.11■□□□□ 0.33
PCNX1-202ENST00000439984 CCDC12Q8WUD4 166 aaPredicted RBP17.11■□□□□ 0.33
PCNX1-202ENST00000439984 NEFHP12036 1026 aa17.1■□□□□ 0.33
PCNX1-202ENST00000439984 ISM2Q6H9L7 571 aa17.1■□□□□ 0.33
PCNX1-202ENST00000439984 RAPGEF6Q8TEU7 1601 aa17.1■□□□□ 0.33
PCNX1-202ENST00000439984 PHACTR2O75167 634 aa17.1■□□□□ 0.33
PCNX1-202ENST00000439984 GUCY1B3Q02153 619 aa17.1■□□□□ 0.33
PCNX1-202ENST00000439984 BMP2KLQ5H9B9 411 aa17.1■□□□□ 0.33
PCNX1-202ENST00000439984 TMX3Q96JJ7 454 aa17.1■□□□□ 0.33
PCNX1-202ENST00000439984 GJB2P29033 226 aa17.1■□□□□ 0.33
PCNX1-202ENST00000439984 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.1■□□□□ 0.33
PCNX1-202ENST00000439984 DHX16O60231 1041 aaKnown RBP17.09■□□□□ 0.33
PCNX1-202ENST00000439984 TRIM27P14373 513 aa17.09■□□□□ 0.33
PCNX1-202ENST00000439984 C1orf141Q5JVX7 400 aa17.09■□□□□ 0.33
PCNX1-202ENST00000439984 ZFYVE27Q5T4F4 411 aa17.09■□□□□ 0.33
PCNX1-202ENST00000439984 DDX19AQ9NUU7 478 aaKnown RBP17.09■□□□□ 0.33
PCNX1-202ENST00000439984 MX1P20591 662 aa17.09■□□□□ 0.33
PCNX1-202ENST00000439984 CEP57Q86XR8 500 aa17.09■□□□□ 0.33
PCNX1-202ENST00000439984 GOLGA6L10A0A0M3HER8 536 aa17.08■□□□□ 0.33
PCNX1-202ENST00000439984 DNA2P51530 1060 aa17.08■□□□□ 0.32
PCNX1-202ENST00000439984 DMTNQ08495 405 aa17.08■□□□□ 0.32
PCNX1-202ENST00000439984 SNX21Q969T3 373 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms