RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 CCNL1Q9UK58 526 aaPredicted RBP13.91□□□□□ -0.18
UBE2F-213ENST00000439780 VIRMAQ69YN4 1812 aaKnown RBP13.91□□□□□ -0.18
UBE2F-213ENST00000439780 MRC1P22897 1456 aa13.91□□□□□ -0.18
UBE2F-213ENST00000439780 DCTN1Q14203 1278 aa13.9□□□□□ -0.18
UBE2F-213ENST00000439780 WDR43Q15061 677 aaKnown RBP eCLIP13.9□□□□□ -0.18
UBE2F-213ENST00000439780 MCM10Q7L590 875 aa13.9□□□□□ -0.18
UBE2F-213ENST00000439780 CEMIPQ8WUJ3 1361 aa13.89□□□□□ -0.19
UBE2F-213ENST00000439780 LOC102724428A0A0B4J2F2 783 aa13.89□□□□□ -0.19
UBE2F-213ENST00000439780 SIK1P57059 783 aa13.89□□□□□ -0.19
UBE2F-213ENST00000439780 NFE2L2Q16236 605 aa13.89□□□□□ -0.19
UBE2F-213ENST00000439780 SLC15A2Q16348 729 aa13.89□□□□□ -0.19
UBE2F-213ENST00000439780 AKT1S1Q96B36 256 aa13.89□□□□□ -0.19
UBE2F-213ENST00000439780 PDGFDQ9GZP0 370 aaPredicted RBP13.89□□□□□ -0.19
UBE2F-213ENST00000439780 SLC39A6Q13433 755 aa13.88□□□□□ -0.19
UBE2F-213ENST00000439780 ITPK1Q13572 414 aa13.88□□□□□ -0.19
UBE2F-213ENST00000439780 PNNQ9H307 717 aaKnown RBP13.88□□□□□ -0.19
UBE2F-213ENST00000439780 STK32BQ9NY57 414 aa13.88□□□□□ -0.19
UBE2F-213ENST00000439780 PTCD1O75127 700 aaKnown RBP13.87□□□□□ -0.19
UBE2F-213ENST00000439780 NEFMP07197 916 aa13.87□□□□□ -0.19
UBE2F-213ENST00000439780 PNISRQ8TF01 805 aaKnown RBP13.87□□□□□ -0.19
UBE2F-213ENST00000439780 RBM42Q9BTD8 480 aaKnown RBP13.87□□□□□ -0.19
UBE2F-213ENST00000439780 MRS2Q9HD23 443 aa13.87□□□□□ -0.19
UBE2F-213ENST00000439780 DLG5Q8TDM6 1919 aa13.87□□□□□ -0.19
UBE2F-213ENST00000439780 MAPK8IP3Q9UPT6 1336 aa13.87□□□□□ -0.19
UBE2F-213ENST00000439780 HTATSF1O43719 755 aaKnown RBP13.86□□□□□ -0.19
UBE2F-213ENST00000439780 ATP6V1AP38606 617 aa13.86□□□□□ -0.19
UBE2F-213ENST00000439780 TMPOP42166 694 aaKnown RBP13.86□□□□□ -0.19
UBE2F-213ENST00000439780 TEFQ10587 303 aa13.86□□□□□ -0.19
UBE2F-213ENST00000439780 LINC00116Q8NCU8 138 aa13.86□□□□□ -0.19
UBE2F-213ENST00000439780 RUNDC1Q96C34 613 aa13.86□□□□□ -0.19
UBE2F-213ENST00000439780 THUMPD2Q9BTF0 503 aaKnown RBP13.86□□□□□ -0.19
UBE2F-213ENST00000439780 RRP7AQ9Y3A4 280 aaKnown RBP13.86□□□□□ -0.19
UBE2F-213ENST00000439780 SIPA1L3O60292 1781 aaPredicted RBP13.86□□□□□ -0.19
UBE2F-213ENST00000439780 TAF1LQ8IZX4 1826 aa13.85□□□□□ -0.19
UBE2F-213ENST00000439780 KCNQ3O43525 872 aa13.85□□□□□ -0.19
UBE2F-213ENST00000439780 AMIGO3Q86WK7 504 aa13.85□□□□□ -0.19
UBE2F-213ENST00000439780 RTF1Q92541 710 aaKnown RBP13.85□□□□□ -0.19
UBE2F-213ENST00000439780 C5P01031 1676 aa13.85□□□□□ -0.19
UBE2F-213ENST00000439780 RIPK4P57078 832 aa13.84□□□□□ -0.19
UBE2F-213ENST00000439780 SMIM5Q71RC9 77 aa13.84□□□□□ -0.19
UBE2F-213ENST00000439780 KCPQ6ZWJ8 1503 aa13.84□□□□□ -0.19
UBE2F-213ENST00000439780 NEUROD2Q15784 382 aa13.83□□□□□ -0.2
UBE2F-213ENST00000439780 MIS18AQ9NYP9 233 aa13.83□□□□□ -0.2
UBE2F-213ENST00000439780 SRCAPQ6ZRS2 3230 aa13.83□□□□□ -0.2
UBE2F-213ENST00000439780 PNPLA7Q6ZV29 1317 aa13.83□□□□□ -0.2
UBE2F-213ENST00000439780 C4BP0C0L5 1744 aa13.82□□□□□ -0.2
UBE2F-213ENST00000439780 CASZ1Q86V15 1759 aa13.82□□□□□ -0.2
UBE2F-213ENST00000439780 BTBD11A6QL63 1104 aa13.82□□□□□ -0.2
UBE2F-213ENST00000439780 APAF1O14727 1248 aa13.82□□□□□ -0.2
UBE2F-213ENST00000439780 ZNF790Q6PG37 636 aa13.82□□□□□ -0.2
UBE2F-213ENST00000439780 TFCP2L1Q9NZI6 479 aa13.82□□□□□ -0.2
UBE2F-213ENST00000439780 TRIM35Q9UPQ4 493 aa13.82□□□□□ -0.2
UBE2F-213ENST00000439780 TUBGCP6Q96RT7 1819 aa13.82□□□□□ -0.2
UBE2F-213ENST00000439780 ZNF831Q5JPB2 1677 aa13.82□□□□□ -0.2
UBE2F-213ENST00000439780 SENP3-EIF4A1A0A087X0R7 540 aa13.81□□□□□ -0.2
UBE2F-213ENST00000439780 TAF7Q15545 349 aaPredicted RBP13.81□□□□□ -0.2
UBE2F-213ENST00000439780 DNAJC10Q8IXB1 793 aa13.81□□□□□ -0.2
UBE2F-213ENST00000439780 ZNF496Q96IT1 587 aaPredicted RBP13.81□□□□□ -0.2
UBE2F-213ENST00000439780 TJP1Q07157 1748 aa13.81□□□□□ -0.2
UBE2F-213ENST00000439780 UBR2Q8IWV8 1755 aa13.81□□□□□ -0.2
UBE2F-213ENST00000439780 COL23A1Q86Y22 540 aaPredicted RBP13.8□□□□□ -0.2
UBE2F-213ENST00000439780 COL5A3P25940 1745 aaPredicted RBP13.79□□□□□ -0.2
UBE2F-213ENST00000439780 ZBTB7AO95365 584 aa13.79□□□□□ -0.2
UBE2F-213ENST00000439780 TTC5Q8N0Z6 440 aa13.79□□□□□ -0.2
UBE2F-213ENST00000439780 AK7Q96M32 723 aa13.79□□□□□ -0.2
UBE2F-213ENST00000439780 QSER1Q2KHR3 1735 aa13.78□□□□□ -0.2
UBE2F-213ENST00000439780 GNPATO15228 680 aa13.78□□□□□ -0.2
UBE2F-213ENST00000439780 CYP19A1P11511 503 aaPredicted RBP13.78□□□□□ -0.2
UBE2F-213ENST00000439780 CRKLP46109 303 aaKnown RBP13.78□□□□□ -0.2
UBE2F-213ENST00000439780 RC3H1Q5TC82 1133 aaKnown RBP13.78□□□□□ -0.2
UBE2F-213ENST00000439780 DIEXFQ68CQ4 756 aaKnown RBP13.78□□□□□ -0.2
UBE2F-213ENST00000439780 INTS5Q6P9B9 1019 aaKnown RBP13.78□□□□□ -0.2
UBE2F-213ENST00000439780 VSIG10Q8N0Z9 540 aa13.78□□□□□ -0.2
UBE2F-213ENST00000439780 CNTNAP4Q9C0A0 1308 aa13.78□□□□□ -0.2
UBE2F-213ENST00000439780 HEG1Q9ULI3 1381 aa13.78□□□□□ -0.2
UBE2F-213ENST00000439780 CICQ96RK0 1608 aaPredicted RBP13.78□□□□□ -0.2
UBE2F-213ENST00000439780 UBR3Q6ZT12 1888 aa13.78□□□□□ -0.2
UBE2F-213ENST00000439780 MYH14Q7Z406 1995 aaKnown RBP13.78□□□□□ -0.2
UBE2F-213ENST00000439780 PRAMEF22A3QJZ6 481 aa13.77□□□□□ -0.21
UBE2F-213ENST00000439780 LMOD3Q0VAK6 560 aa13.77□□□□□ -0.21
UBE2F-213ENST00000439780 FAM9BQ8IZU0 186 aa13.77□□□□□ -0.21
UBE2F-213ENST00000439780 FMNL2Q96PY5 1086 aa13.77□□□□□ -0.21
UBE2F-213ENST00000439780 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
UBE2F-213ENST00000439780 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.76□□□□□ -0.21
UBE2F-213ENST00000439780 PHF14O94880 888 aa13.76□□□□□ -0.21
UBE2F-213ENST00000439780 HMGB2P26583 209 aaKnown RBP13.76□□□□□ -0.21
UBE2F-213ENST00000439780 RPS6KA4O75676 772 aa13.75□□□□□ -0.21
UBE2F-213ENST00000439780 PTGER2P43116 358 aa13.75□□□□□ -0.21
UBE2F-213ENST00000439780 MIER1Q8N108 512 aa13.75□□□□□ -0.21
UBE2F-213ENST00000439780 SPON1Q9HCB6 807 aa13.75□□□□□ -0.21
UBE2F-213ENST00000439780 USP16Q9Y5T5 823 aa13.75□□□□□ -0.21
UBE2F-213ENST00000439780 KDM3BQ7LBC6 1761 aa13.75□□□□□ -0.21
UBE2F-213ENST00000439780 MSH5O43196 834 aa13.74□□□□□ -0.21
UBE2F-213ENST00000439780 SSFA2P28290 1259 aa13.74□□□□□ -0.21
UBE2F-213ENST00000439780 EIF4A1P60842 406 aaKnown RBP13.74□□□□□ -0.21
UBE2F-213ENST00000439780 SGIP1Q9BQI5 828 aa13.74□□□□□ -0.21
UBE2F-213ENST00000439780 MTFR1LQ9H019 292 aa13.74□□□□□ -0.21
UBE2F-213ENST00000439780 CCDC87Q9NVE4 849 aa13.74□□□□□ -0.21
UBE2F-213ENST00000439780 RTCBQ9Y3I0 505 aaKnown RBP13.74□□□□□ -0.21
UBE2F-213ENST00000439780 LRP5O75197 1615 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms