RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 PKD1L3Q7Z443 1732 aa14.82□□□□□ -0.04
SMAD3-202ENST00000439724 SCN11AQ9UI33 1791 aa14.82□□□□□ -0.04
SMAD3-202ENST00000439724 CCT4P50991 539 aaKnown RBP14.82□□□□□ -0.04
SMAD3-202ENST00000439724 EIF4A1P60842 406 aaKnown RBP14.82□□□□□ -0.04
SMAD3-202ENST00000439724 TEFQ10587 303 aa14.82□□□□□ -0.04
SMAD3-202ENST00000439724 NPM2Q86SE8 214 aaKnown RBP14.82□□□□□ -0.04
SMAD3-202ENST00000439724 CABLES1Q8TDN4 633 aa14.82□□□□□ -0.04
SMAD3-202ENST00000439724 CHMP4AQ9BY43 222 aa14.82□□□□□ -0.04
SMAD3-202ENST00000439724 C1orf115Q9H7X2 142 aa14.82□□□□□ -0.04
SMAD3-202ENST00000439724 SIRT2Q8IXJ6 389 aa14.81□□□□□ -0.04
SMAD3-202ENST00000439724 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.81□□□□□ -0.043e-7■□□□□ 8.4
SMAD3-202ENST00000439724 NOP58Q9Y2X3 529 aaKnown RBP14.81□□□□□ -0.04
SMAD3-202ENST00000439724 FLIIQ13045 1269 aa14.8□□□□□ -0.04
SMAD3-202ENST00000439724 MPRIPQ6WCQ1 1025 aa14.8□□□□□ -0.04
SMAD3-202ENST00000439724 RAPGEF4Q8WZA2 1011 aa14.8□□□□□ -0.04
SMAD3-202ENST00000439724 NLRP2Q9NX02 1062 aa14.8□□□□□ -0.04
SMAD3-202ENST00000439724 MEGF6O75095 1541 aa14.8□□□□□ -0.04
SMAD3-202ENST00000439724 TATP17735 454 aaPredicted RBP14.79□□□□□ -0.04
SMAD3-202ENST00000439724 HDGFL1Q5TGJ6 251 aa14.79□□□□□ -0.04
SMAD3-202ENST00000439724 CHD1LQ86WJ1 897 aa14.79□□□□□ -0.04
SMAD3-202ENST00000439724 RPAP2Q8IXW5 612 aaPredicted RBP14.79□□□□□ -0.04
SMAD3-202ENST00000439724 BTBD11A6QL63 1104 aa14.78□□□□□ -0.04
SMAD3-202ENST00000439724 ERICH6Q7L0X2 663 aa14.78□□□□□ -0.04
SMAD3-202ENST00000439724 ANKRD44Q8N8A2 993 aa14.78□□□□□ -0.04
SMAD3-202ENST00000439724 DDRGK1Q96HY6 314 aa14.78□□□□□ -0.04
SMAD3-202ENST00000439724 HEG1Q9ULI3 1381 aa14.78□□□□□ -0.04
SMAD3-202ENST00000439724 CHRNA2Q15822 529 aa14.77□□□□□ -0.04
SMAD3-202ENST00000439724 SPG7Q9UQ90 795 aa14.77□□□□□ -0.04
SMAD3-202ENST00000439724 MRC1P22897 1456 aa14.77□□□□□ -0.04
SMAD3-202ENST00000439724 PARP4Q9UKK3 1724 aaKnown RBP14.77□□□□□ -0.05
SMAD3-202ENST00000439724 KDM6AO15550 1401 aaPredicted RBP14.77□□□□□ -0.05
SMAD3-202ENST00000439724 F6X3S4 739 aa14.76□□□□□ -0.05
SMAD3-202ENST00000439724 CSB-PGBD3P0DP91 1061 aa14.76□□□□□ -0.05
SMAD3-202ENST00000439724 FKBP5Q13451 457 aaPredicted RBP14.76□□□□□ -0.05
SMAD3-202ENST00000439724 MEIS3Q99687 375 aa14.76□□□□□ -0.05
SMAD3-202ENST00000439724 ANP32EQ9BTT0 268 aa14.76□□□□□ -0.05
SMAD3-202ENST00000439724 ZBTB47Q9UFB7 747 aaPredicted RBP14.76□□□□□ -0.05
SMAD3-202ENST00000439724 KCNQ3O43525 872 aa14.76□□□□□ -0.05
SMAD3-202ENST00000439724 CEP85Q6P2H3 762 aa14.76□□□□□ -0.05
SMAD3-202ENST00000439724 LNPKQ9C0E8 428 aa14.76□□□□□ -0.05
SMAD3-202ENST00000439724 DCTPP1Q9H773 170 aa14.76□□□□□ -0.05
SMAD3-202ENST00000439724 PHKG2P15735 406 aa14.75□□□□□ -0.05
SMAD3-202ENST00000439724 SLC4A10Q6U841 1118 aa14.75□□□□□ -0.05
SMAD3-202ENST00000439724 NECTIN2Q92692 538 aa14.75□□□□□ -0.05
SMAD3-202ENST00000439724 ANKRD45Q5TZF3 282 aa14.74□□□□□ -0.05
SMAD3-202ENST00000439724 PRDM11Q9NQV5 511 aa14.74□□□□□ -0.05
SMAD3-202ENST00000439724 COL5A2P05997 1499 aaPredicted RBP14.74□□□□□ -0.05
SMAD3-202ENST00000439724 IFNL2Q8IZJ0 200 aa14.73□□□□□ -0.05
SMAD3-202ENST00000439724 WDR17Q8IZU2 1322 aa14.73□□□□□ -0.05
SMAD3-202ENST00000439724 GNAI3P08754 354 aa14.72□□□□□ -0.05
SMAD3-202ENST00000439724 SLC52A2Q9HAB3 445 aa14.72□□□□□ -0.05
SMAD3-202ENST00000439724 HMMRO75330 724 aa14.71□□□□□ -0.05
SMAD3-202ENST00000439724 GIGYF1O75420 1035 aaPredicted RBP14.71□□□□□ -0.05
SMAD3-202ENST00000439724 SEC24BO95487 1268 aa14.71□□□□□ -0.05
SMAD3-202ENST00000439724 EIF2S2P20042 333 aaKnown RBP14.71□□□□□ -0.05
SMAD3-202ENST00000439724 CHPF2Q9P2E5 772 aa14.71□□□□□ -0.05
SMAD3-202ENST00000439724 GNAI2P04899 355 aa14.71□□□□□ -0.06
SMAD3-202ENST00000439724 HSP90AB1P08238 724 aaKnown RBP14.71□□□□□ -0.06
SMAD3-202ENST00000439724 BMP2KLQ5H9B9 411 aa14.71□□□□□ -0.06
SMAD3-202ENST00000439724 DCAF5Q96JK2 942 aa14.71□□□□□ -0.06
SMAD3-202ENST00000439724 PHAXQ9H814 394 aaKnown RBP14.71□□□□□ -0.06
SMAD3-202ENST00000439724 DBF4Q9UBU7 674 aaPredicted RBP14.71□□□□□ -0.06
SMAD3-202ENST00000439724 C5P01031 1676 aa14.7□□□□□ -0.06
SMAD3-202ENST00000439724 UPF2Q9HAU5 1272 aaKnown RBP14.7□□□□□ -0.06
SMAD3-202ENST00000439724 CYP27B1O15528 508 aa14.69□□□□□ -0.06
SMAD3-202ENST00000439724 ZNF790Q6PG37 636 aa14.68□□□□□ -0.06
SMAD3-202ENST00000439724 AHDC1Q5TGY3 1603 aaPredicted RBP14.68□□□□□ -0.06
SMAD3-202ENST00000439724 SHANK3Q9BYB0 1731 aa14.68□□□□□ -0.06
SMAD3-202ENST00000439724 ADCY9O60503 1353 aa14.68□□□□□ -0.06
SMAD3-202ENST00000439724 DNAAF4Q8WXU2 420 aa14.67□□□□□ -0.06
SMAD3-202ENST00000439724 TBC1D32Q96NH3 1257 aa14.67□□□□□ -0.06
SMAD3-202ENST00000439724 CARD10Q9BWT7 1032 aa14.67□□□□□ -0.06
SMAD3-202ENST00000439724 SRCIN1Q9C0H9 1055 aa14.67□□□□□ -0.06
SMAD3-202ENST00000439724 ROBO1Q9Y6N7 1651 aa14.67□□□□□ -0.06
SMAD3-202ENST00000439724 COL22A1Q8NFW1 1626 aaPredicted RBP14.67□□□□□ -0.06
SMAD3-202ENST00000439724 PCDH11XQ9BZA7 1347 aa14.67□□□□□ -0.06
SMAD3-202ENST00000439724 PCDH11YQ9BZA8 1340 aa14.67□□□□□ -0.06
SMAD3-202ENST00000439724 TOM1L2Q6ZVM7 507 aa14.66□□□□□ -0.06
SMAD3-202ENST00000439724 USP44Q9H0E7 712 aa14.66□□□□□ -0.06
SMAD3-202ENST00000439724 GLI3P10071 1580 aa14.66□□□□□ -0.06
SMAD3-202ENST00000439724 LAMB4A4D0S4 1761 aa14.66□□□□□ -0.06
SMAD3-202ENST00000439724 ATP8B2P98198 1209 aa14.66□□□□□ -0.06
SMAD3-202ENST00000439724 BEND3Q5T5X7 828 aa14.66□□□□□ -0.06
SMAD3-202ENST00000439724 PLEKHM2Q8IWE5 1019 aa14.66□□□□□ -0.06
SMAD3-202ENST00000439724 NFATC2IPQ8NCF5 419 aa14.66□□□□□ -0.06
SMAD3-202ENST00000439724 HYPKQ9NX55 129 aa14.66□□□□□ -0.06
SMAD3-202ENST00000439724 LTBP4Q8N2S1 1624 aa14.65□□□□□ -0.06
SMAD3-202ENST00000439724 PI4KAP2A4QPH2 592 aa14.65□□□□□ -0.06
SMAD3-202ENST00000439724 UBTFL1P0CB47 393 aaPredicted RBP14.65□□□□□ -0.06
SMAD3-202ENST00000439724 PI4KAP1Q8N8J0 262 aa14.65□□□□□ -0.06
SMAD3-202ENST00000439724 DDX21Q9NR30 783 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMAD3-202ENST00000439724 COL14A1Q05707 1796 aaKnown RBP14.65□□□□□ -0.06
SMAD3-202ENST00000439724 PAPPAQ13219 1627 aa14.64□□□□□ -0.07
SMAD3-202ENST00000439724 PRAMEF22A3QJZ6 481 aa14.64□□□□□ -0.07
SMAD3-202ENST00000439724 ANXA1P04083 346 aa14.64□□□□□ -0.07
SMAD3-202ENST00000439724 SLC39A6Q13433 755 aa14.64□□□□□ -0.07
SMAD3-202ENST00000439724 LRRFIP2Q9Y608 721 aaKnown RBP14.64□□□□□ -0.07
SMAD3-202ENST00000439724 UBR2Q8IWV8 1755 aa14.64□□□□□ -0.07
SMAD3-202ENST00000439724 ALDH1L1O75891 902 aa14.63□□□□□ -0.07
SMAD3-202ENST00000439724 IL2RBP14784 551 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms