RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 KLHL34Q8N239 644 aa17.63■□□□□ 0.41
TSC2-206ENST00000439117 MAP3K11Q16584 847 aa17.63■□□□□ 0.41
TSC2-206ENST00000439117 CHD1LQ86WJ1 897 aa17.63■□□□□ 0.41
TSC2-206ENST00000439117 DUSP27Q5VZP5 1158 aa17.62■□□□□ 0.41
TSC2-206ENST00000439117 TCOF1Q13428 1488 aaKnown RBP17.62■□□□□ 0.41
TSC2-206ENST00000439117 BRMS1Q9HCU9 246 aa17.62■□□□□ 0.41
TSC2-206ENST00000439117 SHTN1A0MZ66 631 aa17.62■□□□□ 0.41
TSC2-206ENST00000439117 TXLNBQ8N3L3 684 aa17.62■□□□□ 0.41
TSC2-206ENST00000439117 LUC7LQ9NQ29 371 aaKnown RBP17.62■□□□□ 0.41
TSC2-206ENST00000439117 MIS18AQ9NYP9 233 aa17.62■□□□□ 0.41
TSC2-206ENST00000439117 CT47A1Q5JQC4 288 aaPredicted RBP17.61■□□□□ 0.41
TSC2-206ENST00000439117 LARP1BQ659C4 914 aaKnown RBP17.61■□□□□ 0.41
TSC2-206ENST00000439117 TAF7Q15545 349 aaPredicted RBP17.61■□□□□ 0.41
TSC2-206ENST00000439117 CCDC158Q5M9N0 1113 aa17.61■□□□□ 0.41
TSC2-206ENST00000439117 KRT28Q7Z3Y7 464 aa17.61■□□□□ 0.41
TSC2-206ENST00000439117 ZSCAN31Q96LW9 406 aaPredicted RBP17.61■□□□□ 0.41
TSC2-206ENST00000439117 CFAP45Q9UL16 551 aa17.61■□□□□ 0.41
TSC2-206ENST00000439117 ACEP12821 1306 aa17.61■□□□□ 0.41
TSC2-206ENST00000439117 FAM177A1Q8N128 213 aaPredicted RBP17.61■□□□□ 0.41
TSC2-206ENST00000439117 USHBP1Q8N6Y0 703 aa17.61■□□□□ 0.41
TSC2-206ENST00000439117 DMRT2Q9Y5R5 561 aa17.61■□□□□ 0.41
TSC2-206ENST00000439117 ABCC2Q92887 1545 aa17.61■□□□□ 0.41
TSC2-206ENST00000439117 BBXQ8WY36 941 aaPredicted RBP17.6■□□□□ 0.41
TSC2-206ENST00000439117 CTDP1Q9Y5B0 961 aaPredicted RBP17.6■□□□□ 0.41
TSC2-206ENST00000439117 CADPS2Q86UW7 1296 aa17.6■□□□□ 0.41
TSC2-206ENST00000439117 UPF3BQ9BZI7 483 aaKnown RBP17.6■□□□□ 0.41
TSC2-206ENST00000439117 FYB1O15117 783 aa17.6■□□□□ 0.41
TSC2-206ENST00000439117 CRACR2AQ9BSW2 395 aa17.6■□□□□ 0.41
TSC2-206ENST00000439117 TBC1D2Q9BYX2 928 aa17.6■□□□□ 0.41
TSC2-206ENST00000439117 SIL1Q9H173 461 aa17.6■□□□□ 0.41
TSC2-206ENST00000439117 MAGEC2Q9UBF1 373 aaPredicted RBP17.6■□□□□ 0.41
TSC2-206ENST00000439117 LRPPRCP42704 1394 aaKnown RBP17.6■□□□□ 0.41
TSC2-206ENST00000439117 SRGAP3O43295 1099 aa17.6■□□□□ 0.41
TSC2-206ENST00000439117 NEMFO60524 1076 aa17.6■□□□□ 0.41
TSC2-206ENST00000439117 CCDC183Q5T5S1 534 aa17.6■□□□□ 0.41
TSC2-206ENST00000439117 CCDC181Q5TID7 509 aa17.6■□□□□ 0.41
TSC2-206ENST00000439117 RPAP2Q8IXW5 612 aaPredicted RBP17.6■□□□□ 0.41
TSC2-206ENST00000439117 SPATA32Q96LK8 384 aa17.6■□□□□ 0.41
TSC2-206ENST00000439117 SMTNL1A8MU46 457 aa17.59■□□□□ 0.41
TSC2-206ENST00000439117 ME1P48163 572 aa17.59■□□□□ 0.41
TSC2-206ENST00000439117 TTC21BQ7Z4L5 1316 aa17.59■□□□□ 0.41
TSC2-206ENST00000439117 CENPHQ9H3R5 247 aa17.59■□□□□ 0.41
TSC2-206ENST00000439117 SFPQP23246 707 aaKnown RBP eCLIP17.59■□□□□ 0.41
TSC2-206ENST00000439117 CCDC57Q2TAC2 916 aa17.59■□□□□ 0.41
TSC2-206ENST00000439117 ZSCAN12O43309 604 aa17.58■□□□□ 0.41
TSC2-206ENST00000439117 STARD3NLO95772 234 aa17.58■□□□□ 0.41
TSC2-206ENST00000439117 TNNT1P13805 278 aa17.58■□□□□ 0.41
TSC2-206ENST00000439117 GTPBP4Q9BZE4 634 aaKnown RBP17.58■□□□□ 0.41
TSC2-206ENST00000439117 BRPF1P55201 1214 aaPredicted RBP17.58■□□□□ 0.4
TSC2-206ENST00000439117 HSP90AB2PQ58FF8 381 aa17.58■□□□□ 0.4
TSC2-206ENST00000439117 DYDC1Q8WWB3 177 aa17.58■□□□□ 0.4
TSC2-206ENST00000439117 TNPO1Q92973 898 aaKnown RBP17.58■□□□□ 0.4
TSC2-206ENST00000439117 GNL3LQ9NVN8 582 aaKnown RBP17.58■□□□□ 0.4
TSC2-206ENST00000439117 EPS15P42566 896 aa17.58■□□□□ 0.4
TSC2-206ENST00000439117 BMS1Q14692 1282 aaKnown RBP17.58■□□□□ 0.4
TSC2-206ENST00000439117 TMEM57Q8N5G2 664 aa17.58■□□□□ 0.4
TSC2-206ENST00000439117 TTC39AQ5SRH9 613 aa17.57■□□□□ 0.4
TSC2-206ENST00000439117 GTF2F1P35269 517 aaKnown RBP eCLIP17.57■□□□□ 0.41e-8■■■■■ 44.7
TSC2-206ENST00000439117 MAP9Q49MG5 647 aa17.57■□□□□ 0.4
TSC2-206ENST00000439117 DDX11Q96FC9 970 aa17.57■□□□□ 0.4
TSC2-206ENST00000439117 PTCD1O75127 700 aaKnown RBP17.57■□□□□ 0.4
TSC2-206ENST00000439117 CEBPZQ03701 1054 aaKnown RBP17.57■□□□□ 0.4
TSC2-206ENST00000439117 ALDH1L2Q3SY69 923 aa17.57■□□□□ 0.4
TSC2-206ENST00000439117 SSH1Q8WYL5 1049 aa17.57■□□□□ 0.4
TSC2-206ENST00000439117 DISP1Q96F81 1524 aa17.56■□□□□ 0.4
TSC2-206ENST00000439117 SF3B2Q13435 895 aaKnown RBP17.56■□□□□ 0.4
TSC2-206ENST00000439117 MPHOSPH8Q99549 860 aa17.56■□□□□ 0.4
TSC2-206ENST00000439117 ANKRD36BQ8N2N9 1353 aa17.56■□□□□ 0.4
TSC2-206ENST00000439117 RIMS2Q9UQ26 1411 aa17.56■□□□□ 0.4
TSC2-206ENST00000439117 RALGAPBQ86X10 1494 aa17.56■□□□□ 0.4
TSC2-206ENST00000439117 RARSP54136 660 aaKnown RBP17.56■□□□□ 0.4
TSC2-206ENST00000439117 TMOD3Q9NYL9 352 aa17.56■□□□□ 0.4
TSC2-206ENST00000439117 KLHL40Q2TBA0 621 aa17.56■□□□□ 0.4
TSC2-206ENST00000439117 MCM3P25205 808 aa17.55■□□□□ 0.4
TSC2-206ENST00000439117 SHANK2Q9UPX8 1470 aa17.55■□□□□ 0.4
TSC2-206ENST00000439117 UVSSAQ2YD98 709 aa17.55■□□□□ 0.4
TSC2-206ENST00000439117 ARHGAP29Q52LW3 1261 aa17.55■□□□□ 0.4
TSC2-206ENST00000439117 ODF2Q5BJF6 829 aa17.55■□□□□ 0.4
TSC2-206ENST00000439117 KRT222Q8N1A0 295 aa17.55■□□□□ 0.4
TSC2-206ENST00000439117 PRAG1Q86YV5 1406 aa17.55■□□□□ 0.4
TSC2-206ENST00000439117 SART3Q15020 963 aaKnown RBP17.55■□□□□ 0.4
TSC2-206ENST00000439117 TRERF1Q96PN7 1200 aa17.55■□□□□ 0.4
TSC2-206ENST00000439117 CEP126Q9P2H0 1117 aa17.55■□□□□ 0.4
TSC2-206ENST00000439117 MAPKBP1O60336 1514 aa17.55■□□□□ 0.4
TSC2-206ENST00000439117 XRCC6P12956 609 aaKnown RBP eCLIP17.54■□□□□ 0.4
TSC2-206ENST00000439117 TXLNAP40222 546 aa17.54■□□□□ 0.4
TSC2-206ENST00000439117 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.54■□□□□ 0.41e-6■■■■□ 25.3
TSC2-206ENST00000439117 ADAMTS2O95450 1211 aa17.54■□□□□ 0.4
TSC2-206ENST00000439117 MPRIPQ6WCQ1 1025 aa17.54■□□□□ 0.4
TSC2-206ENST00000439117 FAM193AP78312 1265 aa17.54■□□□□ 0.4
TSC2-206ENST00000439117 USP25Q9UHP3 1055 aa17.54■□□□□ 0.4
TSC2-206ENST00000439117 PAXBP1Q9Y5B6 917 aa17.53■□□□□ 0.4
TSC2-206ENST00000439117 JAKMIP3Q5VZ66 844 aa17.53■□□□□ 0.4
TSC2-206ENST00000439117 POLR3GO15318 223 aaPredicted RBP17.53■□□□□ 0.4
TSC2-206ENST00000439117 URI1O94763 535 aaPredicted RBP17.53■□□□□ 0.4
TSC2-206ENST00000439117 LARP1Q6PKG0 1096 aaKnown RBP17.53■□□□□ 0.4
TSC2-206ENST00000439117 MICALCLQ6ZW33 695 aa17.53■□□□□ 0.4
TSC2-206ENST00000439117 AACSQ86V21 672 aa17.53■□□□□ 0.4
TSC2-206ENST00000439117 TCEAL9Q9UHQ7 104 aa17.52■□□□□ 0.4
TSC2-206ENST00000439117 CCDC148Q8NFR7 591 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms