RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 SLC52A2Q9HAB3 445 aa22.36■■□□□ 1.17
TARDBP-203ENST00000439080 ZNF831Q5JPB2 1677 aa22.35■■□□□ 1.17
TARDBP-203ENST00000439080 NFATC2IPQ8NCF5 419 aa22.34■■□□□ 1.17
TARDBP-203ENST00000439080 IL17REQ8NFR9 667 aa22.34■■□□□ 1.17
TARDBP-203ENST00000439080 RTF1Q92541 710 aaKnown RBP22.34■■□□□ 1.17
TARDBP-203ENST00000439080 CICQ96RK0 1608 aaPredicted RBP22.34■■□□□ 1.17
TARDBP-203ENST00000439080 KDM3BQ7LBC6 1761 aa22.33■■□□□ 1.17
TARDBP-203ENST00000439080 COL5A3P25940 1745 aaPredicted RBP22.33■■□□□ 1.17
TARDBP-203ENST00000439080 TXNRD1Q16881 649 aa22.33■■□□□ 1.17
TARDBP-203ENST00000439080 MCM10Q7L590 875 aa22.33■■□□□ 1.17
TARDBP-203ENST00000439080 TJP1Q07157 1748 aa22.32■■□□□ 1.16
TARDBP-203ENST00000439080 CCER2I3L3R5 266 aa22.32■■□□□ 1.16
TARDBP-203ENST00000439080 HTATSF1O43719 755 aaKnown RBP22.32■■□□□ 1.16
TARDBP-203ENST00000439080 TMPOP42166 694 aaKnown RBP22.32■■□□□ 1.16
TARDBP-203ENST00000439080 ASAP1Q9ULH1 1129 aa22.32■■□□□ 1.16
TARDBP-203ENST00000439080 RRP7AQ9Y3A4 280 aaKnown RBP22.32■■□□□ 1.16
TARDBP-203ENST00000439080 TUBGCP6Q96RT7 1819 aa22.32■■□□□ 1.16
TARDBP-203ENST00000439080 KCPQ6ZWJ8 1503 aa22.31■■□□□ 1.16
TARDBP-203ENST00000439080 TEFQ10587 303 aa22.31■■□□□ 1.16
TARDBP-203ENST00000439080 DCTN1Q14203 1278 aa22.31■■□□□ 1.16
TARDBP-203ENST00000439080 PROM2Q8N271 834 aa22.31■■□□□ 1.16
TARDBP-203ENST00000439080 SMARCC1Q92922 1105 aaPredicted RBP22.31■■□□□ 1.16
TARDBP-203ENST00000439080 ATG3Q9NT62 314 aa22.31■■□□□ 1.16
TARDBP-203ENST00000439080 RIPK4P57078 832 aa22.3■■□□□ 1.16
TARDBP-203ENST00000439080 FAM9BQ8IZU0 186 aa22.29■■□□□ 1.16
TARDBP-203ENST00000439080 MIER1Q8N108 512 aa22.29■■□□□ 1.16
TARDBP-203ENST00000439080 C4BP0C0L5 1744 aa22.29■■□□□ 1.16
TARDBP-203ENST00000439080 CCNL1Q9UK58 526 aaPredicted RBP22.28■■□□□ 1.16
TARDBP-203ENST00000439080 QSER1Q2KHR3 1735 aa22.28■■□□□ 1.16
TARDBP-203ENST00000439080 APAF1O14727 1248 aa22.27■■□□□ 1.16
TARDBP-203ENST00000439080 LMOD3Q0VAK6 560 aa22.27■■□□□ 1.16
TARDBP-203ENST00000439080 NEUROD2Q15784 382 aa22.27■■□□□ 1.16
TARDBP-203ENST00000439080 SLC27A3Q5K4L6 730 aa22.27■■□□□ 1.16
TARDBP-203ENST00000439080 THUMPD2Q9BTF0 503 aaKnown RBP22.26■■□□□ 1.15
TARDBP-203ENST00000439080 LRRC4BQ9NT99 713 aa22.26■■□□□ 1.15
TARDBP-203ENST00000439080 KCNQ4P56696 695 aa22.25■■□□□ 1.15
TARDBP-203ENST00000439080 LOC102724428A0A0B4J2F2 783 aa22.25■■□□□ 1.15
TARDBP-203ENST00000439080 SIK1P57059 783 aa22.25■■□□□ 1.15
TARDBP-203ENST00000439080 SLC39A6Q13433 755 aa22.25■■□□□ 1.15
TARDBP-203ENST00000439080 ANO8Q9HCE9 1232 aaPredicted RBP22.24■■□□□ 1.15
TARDBP-203ENST00000439080 LAMB4A4D0S4 1761 aa22.23■■□□□ 1.15
TARDBP-203ENST00000439080 UBR3Q6ZT12 1888 aa22.23■■□□□ 1.15
TARDBP-203ENST00000439080 TRIM35Q9UPQ4 493 aa22.23■■□□□ 1.15
TARDBP-203ENST00000439080 BTBD11A6QL63 1104 aa22.22■■□□□ 1.15
TARDBP-203ENST00000439080 RBM42Q9BTD8 480 aaKnown RBP22.22■■□□□ 1.15
TARDBP-203ENST00000439080 CASZ1Q86V15 1759 aa22.21■■□□□ 1.15
TARDBP-203ENST00000439080 PTCD1O75127 700 aaKnown RBP22.21■■□□□ 1.15
TARDBP-203ENST00000439080 TTC5Q8N0Z6 440 aa22.21■■□□□ 1.15
TARDBP-203ENST00000439080 SENP3-EIF4A1A0A087X0R7 540 aa22.2■■□□□ 1.14
TARDBP-203ENST00000439080 ATP6V1AP38606 617 aa22.2■■□□□ 1.14
TARDBP-203ENST00000439080 NBPF14Q5TI25 921 aa22.2■■□□□ 1.14
TARDBP-203ENST00000439080 ZNF790Q6PG37 636 aa22.2■■□□□ 1.14
TARDBP-203ENST00000439080 SLC4A9Q96Q91 983 aa22.2■■□□□ 1.14
TARDBP-203ENST00000439080 ITPK1Q13572 414 aa22.19■■□□□ 1.14
TARDBP-203ENST00000439080 MYH14Q7Z406 1995 aaKnown RBP22.18■■□□□ 1.14
TARDBP-203ENST00000439080 TAF7Q15545 349 aaPredicted RBP22.18■■□□□ 1.14
TARDBP-203ENST00000439080 ZNF827Q17R98 1081 aa22.18■■□□□ 1.14
TARDBP-203ENST00000439080 LINC00116Q8NCU8 138 aa22.17■■□□□ 1.14
TARDBP-203ENST00000439080 STK32BQ9NY57 414 aa22.17■■□□□ 1.14
TARDBP-203ENST00000439080 KCNQ3O43525 872 aa22.16■■□□□ 1.14
TARDBP-203ENST00000439080 R3HDM1Q15032 1099 aaKnown RBP22.16■■□□□ 1.14
TARDBP-203ENST00000439080 PSDA5PKW4 1024 aaPredicted RBP22.15■■□□□ 1.14
TARDBP-203ENST00000439080 SLC15A2Q16348 729 aa22.15■■□□□ 1.14
TARDBP-203ENST00000439080 AKT1S1Q96B36 256 aa22.15■■□□□ 1.14
TARDBP-203ENST00000439080 ZNF496Q96IT1 587 aaPredicted RBP22.15■■□□□ 1.14
TARDBP-203ENST00000439080 MIS18AQ9NYP9 233 aa22.15■■□□□ 1.14
TARDBP-203ENST00000439080 HEG1Q9ULI3 1381 aa22.15■■□□□ 1.14
TARDBP-203ENST00000439080 C4AP0C0L4 1744 aa22.14■■□□□ 1.14
TARDBP-203ENST00000439080 HMGB2P26583 209 aaKnown RBP22.13■■□□□ 1.13
TARDBP-203ENST00000439080 FMNL2Q96PY5 1086 aa22.13■■□□□ 1.13
TARDBP-203ENST00000439080 CCDC27Q2M243 656 aa22.12■■□□□ 1.13
TARDBP-203ENST00000439080 VSIG10Q8N0Z9 540 aa22.12■■□□□ 1.13
TARDBP-203ENST00000439080 TSPYL4Q9UJ04 414 aa22.12■■□□□ 1.13
TARDBP-203ENST00000439080 NCBP3Q53F19 620 aaKnown RBP22.12■■□□□ 1.13
TARDBP-203ENST00000439080 DNAJC10Q8IXB1 793 aa22.12■■□□□ 1.13
TARDBP-203ENST00000439080 AK7Q96M32 723 aa22.12■■□□□ 1.13
TARDBP-203ENST00000439080 CNTNAP4Q9C0A0 1308 aa22.11■■□□□ 1.13
TARDBP-203ENST00000439080 CALD1Q05682 793 aaKnown RBP22.11■■□□□ 1.13
TARDBP-203ENST00000439080 SALL2Q9Y467 1007 aaPredicted RBP22.11■■□□□ 1.13
TARDBP-203ENST00000439080 WWC1Q8IX03 1113 aa22.1■■□□□ 1.13
TARDBP-203ENST00000439080 BABAM1Q9NWV8 329 aa22.1■■□□□ 1.13
TARDBP-203ENST00000439080 TFCP2L1Q9NZI6 479 aa22.1■■□□□ 1.13
TARDBP-203ENST00000439080 LAS1LQ9Y4W2 734 aaKnown RBP22.1■■□□□ 1.13
TARDBP-203ENST00000439080 PNPLA7Q6ZV29 1317 aa22.08■■□□□ 1.12
TARDBP-203ENST00000439080 GNPATO15228 680 aa22.07■■□□□ 1.12
TARDBP-203ENST00000439080 CRKLP46109 303 aaKnown RBP22.07■■□□□ 1.12
TARDBP-203ENST00000439080 EIF4A1P60842 406 aaKnown RBP22.07■■□□□ 1.12
TARDBP-203ENST00000439080 CFAP44Q96MT7 982 aa22.07■■□□□ 1.12
TARDBP-203ENST00000439080 IFT57Q9NWB7 429 aa22.07■■□□□ 1.12
TARDBP-203ENST00000439080 CHL1O00533 1208 aa22.06■■□□□ 1.12
TARDBP-203ENST00000439080 CYP19A1P11511 503 aaPredicted RBP22.06■■□□□ 1.12
TARDBP-203ENST00000439080 AMIGO3Q86WK7 504 aa22.06■■□□□ 1.12
TARDBP-203ENST00000439080 NGEFQ8N5V2 710 aa22.06■■□□□ 1.12
TARDBP-203ENST00000439080 PRAMEF22A3QJZ6 481 aa22.05■■□□□ 1.12
TARDBP-203ENST00000439080 RC3H1Q5TC82 1133 aaKnown RBP22.05■■□□□ 1.12
TARDBP-203ENST00000439080 PDGFDQ9GZP0 370 aaPredicted RBP22.05■■□□□ 1.12
TARDBP-203ENST00000439080 COL24A1Q17RW2 1714 aa22.05■■□□□ 1.12
TARDBP-203ENST00000439080 LRP5O75197 1615 aa22.04■■□□□ 1.12
TARDBP-203ENST00000439080 PHF14O94880 888 aa22.04■■□□□ 1.12
TARDBP-203ENST00000439080 SNRPA1P09661 255 aaKnown RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms