RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 PRKRIP1Q9H875 184 aaPredicted RBP17.78■□□□□ 0.44
LINC00399-201ENST00000439008 QSER1Q2KHR3 1735 aa17.78■□□□□ 0.44
LINC00399-201ENST00000439008 MYBBP1AQ9BQG0 1328 aaKnown RBP17.77■□□□□ 0.44
LINC00399-201ENST00000439008 MRC1P22897 1456 aa17.77■□□□□ 0.44
LINC00399-201ENST00000439008 LOC102724428A0A0B4J2F2 783 aa17.77■□□□□ 0.44
LINC00399-201ENST00000439008 FCHSD2O94868 740 aa17.77■□□□□ 0.44
LINC00399-201ENST00000439008 SIK1P57059 783 aa17.77■□□□□ 0.44
LINC00399-201ENST00000439008 SMIM5Q71RC9 77 aa17.77■□□□□ 0.44
LINC00399-201ENST00000439008 IL17REQ8NFR9 667 aa17.77■□□□□ 0.44
LINC00399-201ENST00000439008 SMARCC1Q92922 1105 aaPredicted RBP17.77■□□□□ 0.44
LINC00399-201ENST00000439008 C4BP0C0L5 1744 aa17.76■□□□□ 0.43
LINC00399-201ENST00000439008 LINC00116Q8NCU8 138 aa17.76■□□□□ 0.43
LINC00399-201ENST00000439008 PNPLA7Q6ZV29 1317 aa17.75■□□□□ 0.43
LINC00399-201ENST00000439008 ZBTB7AO95365 584 aa17.75■□□□□ 0.43
LINC00399-201ENST00000439008 PLEKHF1Q96S99 279 aa17.75■□□□□ 0.43
LINC00399-201ENST00000439008 SLC52A2Q9HAB3 445 aa17.75■□□□□ 0.43
LINC00399-201ENST00000439008 SIPA1L3O60292 1781 aaPredicted RBP17.75■□□□□ 0.43
LINC00399-201ENST00000439008 MAP3K5Q99683 1374 aa17.75■□□□□ 0.43
LINC00399-201ENST00000439008 DLG5Q8TDM6 1919 aa17.74■□□□□ 0.43
LINC00399-201ENST00000439008 UBR3Q6ZT12 1888 aa17.73■□□□□ 0.43
LINC00399-201ENST00000439008 GNAT3A8MTJ3 354 aa17.73■□□□□ 0.43
LINC00399-201ENST00000439008 SLC39A6Q13433 755 aa17.73■□□□□ 0.43
LINC00399-201ENST00000439008 GAS2L2Q8NHY3 880 aa17.73■□□□□ 0.43
LINC00399-201ENST00000439008 ZNF831Q5JPB2 1677 aa17.73■□□□□ 0.43
LINC00399-201ENST00000439008 MYH14Q7Z406 1995 aaKnown RBP17.73■□□□□ 0.43
LINC00399-201ENST00000439008 COL5A3P25940 1745 aaPredicted RBP17.72■□□□□ 0.43
LINC00399-201ENST00000439008 PTGER2P43116 358 aa17.72■□□□□ 0.43
LINC00399-201ENST00000439008 TFCP2L1Q9NZI6 479 aa17.72■□□□□ 0.43
LINC00399-201ENST00000439008 ATF5Q9Y2D1 282 aaPredicted RBP17.72■□□□□ 0.43
LINC00399-201ENST00000439008 TJP1Q07157 1748 aa17.72■□□□□ 0.43
LINC00399-201ENST00000439008 CEMIPQ8WUJ3 1361 aa17.71■□□□□ 0.43
LINC00399-201ENST00000439008 PTCD1O75127 700 aaKnown RBP17.71■□□□□ 0.43
LINC00399-201ENST00000439008 ATP6V1AP38606 617 aa17.71■□□□□ 0.43
LINC00399-201ENST00000439008 CCDC184Q52MB2 194 aa17.71■□□□□ 0.43
LINC00399-201ENST00000439008 COL23A1Q86Y22 540 aaPredicted RBP17.71■□□□□ 0.43
LINC00399-201ENST00000439008 RBM42Q9BTD8 480 aaKnown RBP17.71■□□□□ 0.43
LINC00399-201ENST00000439008 KCPQ6ZWJ8 1503 aa17.71■□□□□ 0.43
LINC00399-201ENST00000439008 DCTN1Q14203 1278 aa17.7■□□□□ 0.42
LINC00399-201ENST00000439008 SGIP1Q9BQI5 828 aa17.7■□□□□ 0.42
LINC00399-201ENST00000439008 SPON1Q9HCB6 807 aa17.7■□□□□ 0.42
LINC00399-201ENST00000439008 UBR2Q8IWV8 1755 aa17.7■□□□□ 0.42
LINC00399-201ENST00000439008 COL24A1Q17RW2 1714 aa17.69■□□□□ 0.42
LINC00399-201ENST00000439008 MCM10Q7L590 875 aa17.68■□□□□ 0.42
LINC00399-201ENST00000439008 CICQ96RK0 1608 aaPredicted RBP17.68■□□□□ 0.42
LINC00399-201ENST00000439008 KCNQ3O43525 872 aa17.67■□□□□ 0.42
LINC00399-201ENST00000439008 MTFR1LQ9H019 292 aa17.66■□□□□ 0.42
LINC00399-201ENST00000439008 ADAMTS8Q9UP79 889 aa17.65■□□□□ 0.42
LINC00399-201ENST00000439008 PHF14O94880 888 aa17.64■□□□□ 0.41
LINC00399-201ENST00000439008 TEFQ10587 303 aa17.64■□□□□ 0.41
LINC00399-201ENST00000439008 NFE2L2Q16236 605 aa17.64■□□□□ 0.41
LINC00399-201ENST00000439008 DNAJC10Q8IXB1 793 aa17.64■□□□□ 0.41
LINC00399-201ENST00000439008 CCDC146Q8IYE0 955 aa17.64■□□□□ 0.41
LINC00399-201ENST00000439008 AK7Q96M32 723 aa17.64■□□□□ 0.41
LINC00399-201ENST00000439008 THUMPD2Q9BTF0 503 aaKnown RBP17.64■□□□□ 0.41
LINC00399-201ENST00000439008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.63■□□□□ 0.41
LINC00399-201ENST00000439008 GNPATO15228 680 aa17.63■□□□□ 0.41
LINC00399-201ENST00000439008 CRKLP46109 303 aaKnown RBP17.62■□□□□ 0.41
LINC00399-201ENST00000439008 RC3H1Q5TC82 1133 aaKnown RBP17.62■□□□□ 0.41
LINC00399-201ENST00000439008 MSL1Q68DK7 614 aa17.62■□□□□ 0.41
LINC00399-201ENST00000439008 INTS5Q6P9B9 1019 aaKnown RBP17.62■□□□□ 0.41
LINC00399-201ENST00000439008 ZNF790Q6PG37 636 aa17.62■□□□□ 0.41
LINC00399-201ENST00000439008 SLC16A10Q8TF71 515 aa17.62■□□□□ 0.41
LINC00399-201ENST00000439008 ZNF496Q96IT1 587 aaPredicted RBP17.62■□□□□ 0.41
LINC00399-201ENST00000439008 CNTNAP4Q9C0A0 1308 aa17.62■□□□□ 0.41
LINC00399-201ENST00000439008 MSH5O43196 834 aa17.61■□□□□ 0.41
LINC00399-201ENST00000439008 HTATSF1O43719 755 aaKnown RBP17.61■□□□□ 0.41
LINC00399-201ENST00000439008 C4AP0C0L4 1744 aa17.61■□□□□ 0.41
LINC00399-201ENST00000439008 CYP19A1P11511 503 aaPredicted RBP17.6■□□□□ 0.41
LINC00399-201ENST00000439008 MIS18AQ9NYP9 233 aa17.6■□□□□ 0.41
LINC00399-201ENST00000439008 RPS6KA4O75676 772 aa17.59■□□□□ 0.41
LINC00399-201ENST00000439008 SSFA2P28290 1259 aa17.59■□□□□ 0.41
LINC00399-201ENST00000439008 TMPOP42166 694 aaKnown RBP17.59■□□□□ 0.41
LINC00399-201ENST00000439008 RTF1Q92541 710 aaKnown RBP17.59■□□□□ 0.41
LINC00399-201ENST00000439008 RRP7AQ9Y3A4 280 aaKnown RBP17.59■□□□□ 0.41
LINC00399-201ENST00000439008 HEG1Q9ULI3 1381 aa17.58■□□□□ 0.4
LINC00399-201ENST00000439008 MAPK8IP3Q9UPT6 1336 aa17.58■□□□□ 0.4
LINC00399-201ENST00000439008 PRAMEF22A3QJZ6 481 aa17.58■□□□□ 0.4
LINC00399-201ENST00000439008 BTBD11A6QL63 1104 aa17.58■□□□□ 0.4
LINC00399-201ENST00000439008 WDR43Q15061 677 aaKnown RBP eCLIP17.57■□□□□ 0.4
LINC00399-201ENST00000439008 FLAD1Q8NFF5 587 aa17.57■□□□□ 0.4
LINC00399-201ENST00000439008 ARHGEF1Q92888 912 aaKnown RBP17.57■□□□□ 0.4
LINC00399-201ENST00000439008 PPP1R1BQ9UD71 204 aaPredicted RBP17.57■□□□□ 0.4
LINC00399-201ENST00000439008 KDM3BQ7LBC6 1761 aa17.57■□□□□ 0.4
LINC00399-201ENST00000439008 RIPK4P57078 832 aa17.56■□□□□ 0.4
LINC00399-201ENST00000439008 TTC5Q8N0Z6 440 aa17.56■□□□□ 0.4
LINC00399-201ENST00000439008 VSIG10Q8N0Z9 540 aa17.56■□□□□ 0.4
LINC00399-201ENST00000439008 RUNDC1Q96C34 613 aa17.56■□□□□ 0.4
LINC00399-201ENST00000439008 ARXQ96QS3 562 aa17.56■□□□□ 0.4
LINC00399-201ENST00000439008 FHDC1Q9C0D6 1143 aaPredicted RBP17.56■□□□□ 0.4
LINC00399-201ENST00000439008 PNNQ9H307 717 aaKnown RBP17.56■□□□□ 0.4
LINC00399-201ENST00000439008 CCDC87Q9NVE4 849 aa17.56■□□□□ 0.4
LINC00399-201ENST00000439008 ZBTB1Q9Y2K1 713 aa17.56■□□□□ 0.4
LINC00399-201ENST00000439008 RTCBQ9Y3I0 505 aaKnown RBP17.56■□□□□ 0.4
LINC00399-201ENST00000439008 NEFMP07197 916 aa17.55■□□□□ 0.4
LINC00399-201ENST00000439008 HMGB2P26583 209 aaKnown RBP17.55■□□□□ 0.4
LINC00399-201ENST00000439008 TAF7Q15545 349 aaPredicted RBP17.55■□□□□ 0.4
LINC00399-201ENST00000439008 TRIM35Q9UPQ4 493 aa17.55■□□□□ 0.4
LINC00399-201ENST00000439008 ANP32CO43423 234 aa17.54■□□□□ 0.4
LINC00399-201ENST00000439008 NEUROD2Q15784 382 aa17.54■□□□□ 0.4
LINC00399-201ENST00000439008 TRAPPC3LQ5T215 181 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms