RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 TRIM35Q9UPQ4 493 aa13.83□□□□□ -0.2
HLA-DMB-259ENST00000438510 LY75O60449 1722 aa13.82□□□□□ -0.2
HLA-DMB-259ENST00000438510 DCTN1Q14203 1278 aa13.82□□□□□ -0.2
HLA-DMB-259ENST00000438510 SYTL4Q96C24 671 aaPredicted RBP13.82□□□□□ -0.2
HLA-DMB-259ENST00000438510 ACSBG1Q96GR2 724 aa13.82□□□□□ -0.2
HLA-DMB-259ENST00000438510 SLC52A2Q9HAB3 445 aa13.82□□□□□ -0.2
HLA-DMB-259ENST00000438510 LGR6Q9HBX8 967 aa13.82□□□□□ -0.2
HLA-DMB-259ENST00000438510 EP400Q96L91 3159 aa13.81□□□□□ -0.2
HLA-DMB-259ENST00000438510 WWC1Q8IX03 1113 aa13.81□□□□□ -0.2
HLA-DMB-259ENST00000438510 SALL2Q9Y467 1007 aaPredicted RBP13.81□□□□□ -0.2
HLA-DMB-259ENST00000438510 SENP3-EIF4A1A0A087X0R7 540 aa13.8□□□□□ -0.2
HLA-DMB-259ENST00000438510 PRIM1P49642 420 aaKnown RBP13.8□□□□□ -0.2
HLA-DMB-259ENST00000438510 ZNF831Q5JPB2 1677 aa13.79□□□□□ -0.2
HLA-DMB-259ENST00000438510 WDR63Q8IWG1 891 aa13.79□□□□□ -0.2
HLA-DMB-259ENST00000438510 NFATC2IPQ8NCF5 419 aa13.79□□□□□ -0.2
HLA-DMB-259ENST00000438510 THUMPD2Q9BTF0 503 aaKnown RBP13.79□□□□□ -0.2
HLA-DMB-259ENST00000438510 BCL11BQ9C0K0 894 aaPredicted RBP13.79□□□□□ -0.2
HLA-DMB-259ENST00000438510 IL16Q14005 1332 aa13.79□□□□□ -0.2
HLA-DMB-259ENST00000438510 ZBED9Q6R2W3 1325 aa13.79□□□□□ -0.2
HLA-DMB-259ENST00000438510 CICQ96RK0 1608 aaPredicted RBP13.79□□□□□ -0.2
HLA-DMB-259ENST00000438510 LAMB4A4D0S4 1761 aa13.78□□□□□ -0.2
HLA-DMB-259ENST00000438510 TAF7Q15545 349 aaPredicted RBP13.78□□□□□ -0.2
HLA-DMB-259ENST00000438510 BABAM1Q9NWV8 329 aa13.78□□□□□ -0.2
HLA-DMB-259ENST00000438510 BTBD11A6QL63 1104 aa13.77□□□□□ -0.21
HLA-DMB-259ENST00000438510 KCNQ2O43526 872 aa13.77□□□□□ -0.21
HLA-DMB-259ENST00000438510 TRIM37O94972 964 aa13.77□□□□□ -0.21
HLA-DMB-259ENST00000438510 GNAI1P63096 354 aa13.77□□□□□ -0.21
HLA-DMB-259ENST00000438510 PIGBQ92521 554 aa13.77□□□□□ -0.21
HLA-DMB-259ENST00000438510 ZNF521Q96K83 1311 aa13.77□□□□□ -0.21
HLA-DMB-259ENST00000438510 IFT57Q9NWB7 429 aa13.77□□□□□ -0.21
HLA-DMB-259ENST00000438510 TTC5Q8N0Z6 440 aa13.76□□□□□ -0.21
HLA-DMB-259ENST00000438510 SMARCC1Q92922 1105 aaPredicted RBP13.76□□□□□ -0.21
HLA-DMB-259ENST00000438510 CFAP44Q96MT7 982 aa13.76□□□□□ -0.21
HLA-DMB-259ENST00000438510 TAF1LQ8IZX4 1826 aa13.76□□□□□ -0.21
HLA-DMB-259ENST00000438510 KCPQ6ZWJ8 1503 aa13.75□□□□□ -0.21
HLA-DMB-259ENST00000438510 GOLGA2Q08379 1002 aa13.75□□□□□ -0.21
HLA-DMB-259ENST00000438510 SF3B2Q13435 895 aaKnown RBP13.75□□□□□ -0.21
HLA-DMB-259ENST00000438510 TSPYL4Q9UJ04 414 aa13.75□□□□□ -0.21
HLA-DMB-259ENST00000438510 LAS1LQ9Y4W2 734 aaKnown RBP13.75□□□□□ -0.21
HLA-DMB-259ENST00000438510 COL5A3P25940 1745 aaPredicted RBP13.75□□□□□ -0.21
HLA-DMB-259ENST00000438510 TJP1Q07157 1748 aa13.75□□□□□ -0.21
HLA-DMB-259ENST00000438510 C5P01031 1676 aa13.75□□□□□ -0.21
HLA-DMB-259ENST00000438510 RREB1Q92766 1687 aa13.75□□□□□ -0.21
HLA-DMB-259ENST00000438510 PALLDQ8WX93 1383 aa13.74□□□□□ -0.21
HLA-DMB-259ENST00000438510 ZNF790Q6PG37 636 aa13.74□□□□□ -0.21
HLA-DMB-259ENST00000438510 CCDC125Q86Z20 511 aa13.74□□□□□ -0.21
HLA-DMB-259ENST00000438510 YTHDC1Q96MU7 727 aaKnown RBP13.74□□□□□ -0.21
HLA-DMB-259ENST00000438510 MYH16Q9H6N6 1097 aa13.74□□□□□ -0.21
HLA-DMB-259ENST00000438510 E9PSI1 815 aa13.73□□□□□ -0.21
HLA-DMB-259ENST00000438510 CHL1O00533 1208 aa13.73□□□□□ -0.21
HLA-DMB-259ENST00000438510 ZNF853P0CG23 659 aa13.73□□□□□ -0.21
HLA-DMB-259ENST00000438510 ATG3Q9NT62 314 aa13.73□□□□□ -0.21
HLA-DMB-259ENST00000438510 APBA3O96018 575 aa13.72□□□□□ -0.21
HLA-DMB-259ENST00000438510 PTF1AQ7RTS3 328 aa13.72□□□□□ -0.21
HLA-DMB-259ENST00000438510 ASAP1Q9ULH1 1129 aa13.72□□□□□ -0.21
HLA-DMB-259ENST00000438510 BAG6P46379 1132 aa13.71□□□□□ -0.21
HLA-DMB-259ENST00000438510 SLC39A6Q13433 755 aa13.71□□□□□ -0.21
HLA-DMB-259ENST00000438510 FMNL2Q96PY5 1086 aa13.71□□□□□ -0.21
HLA-DMB-259ENST00000438510 MBIPQ9NS73 344 aa13.71□□□□□ -0.21
HLA-DMB-259ENST00000438510 MIS18AQ9NYP9 233 aa13.71□□□□□ -0.21
HLA-DMB-259ENST00000438510 NUP188Q5SRE5 1749 aa13.7□□□□□ -0.22
HLA-DMB-259ENST00000438510 FANCIQ9NVI1 1328 aa13.7□□□□□ -0.22
HLA-DMB-259ENST00000438510 PLSCR1O15162 318 aa13.7□□□□□ -0.22
HLA-DMB-259ENST00000438510 HMGB2P26583 209 aaKnown RBP13.7□□□□□ -0.22
HLA-DMB-259ENST00000438510 HEG1Q9ULI3 1381 aa13.7□□□□□ -0.22
HLA-DMB-259ENST00000438510 CACNA1FO60840 1977 aa13.69□□□□□ -0.22
HLA-DMB-259ENST00000438510 PTCD1O75127 700 aaKnown RBP13.69□□□□□ -0.22
HLA-DMB-259ENST00000438510 SLFN5Q08AF3 891 aa13.69□□□□□ -0.22
HLA-DMB-259ENST00000438510 VSIG10Q8N0Z9 540 aa13.69□□□□□ -0.22
HLA-DMB-259ENST00000438510 TSR2Q969E8 191 aaKnown RBP13.69□□□□□ -0.22
HLA-DMB-259ENST00000438510 RBM42Q9BTD8 480 aaKnown RBP13.69□□□□□ -0.22
HLA-DMB-259ENST00000438510 C4BP0C0L5 1744 aa13.68□□□□□ -0.22
HLA-DMB-259ENST00000438510 LOC102724428A0A0B4J2F2 783 aa13.68□□□□□ -0.22
HLA-DMB-259ENST00000438510 SIK1P57059 783 aa13.68□□□□□ -0.22
HLA-DMB-259ENST00000438510 EIF4A1P60842 406 aaKnown RBP13.68□□□□□ -0.22
HLA-DMB-259ENST00000438510 SLC27A3Q5K4L6 730 aa13.68□□□□□ -0.22
HLA-DMB-259ENST00000438510 ZNF496Q96IT1 587 aaPredicted RBP13.68□□□□□ -0.22
HLA-DMB-259ENST00000438510 SOS1Q07889 1333 aaPredicted RBP13.67□□□□□ -0.22
HLA-DMB-259ENST00000438510 KCNQ3O43525 872 aa13.67□□□□□ -0.22
HLA-DMB-259ENST00000438510 CDCA7LQ96GN5 454 aa13.67□□□□□ -0.22
HLA-DMB-259ENST00000438510 TEX13AQ9BXU3 409 aaPredicted RBP13.67□□□□□ -0.22
HLA-DMB-259ENST00000438510 SPINK5Q9NQ38 1064 aaPredicted RBP13.67□□□□□ -0.22
HLA-DMB-259ENST00000438510 CCNL1Q9UK58 526 aaPredicted RBP13.67□□□□□ -0.22
HLA-DMB-259ENST00000438510 HOXB7P09629 217 aa13.66□□□□□ -0.22
HLA-DMB-259ENST00000438510 SNRPA1P09661 255 aaKnown RBP13.66□□□□□ -0.22
HLA-DMB-259ENST00000438510 ATP6V1AP38606 617 aa13.66□□□□□ -0.22
HLA-DMB-259ENST00000438510 QSER1Q2KHR3 1735 aa13.66□□□□□ -0.22
HLA-DMB-259ENST00000438510 TXNRD1Q16881 649 aa13.65□□□□□ -0.22
HLA-DMB-259ENST00000438510 TRMT2AQ8IZ69 625 aaKnown RBP13.65□□□□□ -0.22
HLA-DMB-259ENST00000438510 CHMP4AQ9BY43 222 aa13.65□□□□□ -0.22
HLA-DMB-259ENST00000438510 TUBGCP6Q96RT7 1819 aa13.64□□□□□ -0.23
HLA-DMB-259ENST00000438510 MYH14Q7Z406 1995 aaKnown RBP13.64□□□□□ -0.23
HLA-DMB-259ENST00000438510 UBR3Q6ZT12 1888 aa13.64□□□□□ -0.23
HLA-DMB-259ENST00000438510 GIGYF1O75420 1035 aaPredicted RBP13.64□□□□□ -0.23
HLA-DMB-259ENST00000438510 EN1Q05925 392 aaPredicted RBP13.64□□□□□ -0.23
HLA-DMB-259ENST00000438510 DUSP27Q5VZP5 1158 aa13.64□□□□□ -0.23
HLA-DMB-259ENST00000438510 CAMKK2Q96RR4 588 aa13.64□□□□□ -0.23
HLA-DMB-259ENST00000438510 STARD3NLO95772 234 aa13.63□□□□□ -0.23
HLA-DMB-259ENST00000438510 EXOSC9Q06265 439 aaKnown RBP13.63□□□□□ -0.23
HLA-DMB-259ENST00000438510 EZH2Q15910 746 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms