RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 COL3A1P02461 1466 aaPredicted RBP11.66□□□□□ -0.54
HERPUD2-206ENST00000438224 PRIM1P49642 420 aaKnown RBP11.66□□□□□ -0.54
HERPUD2-206ENST00000438224 QSER1Q2KHR3 1735 aa11.66□□□□□ -0.54
HERPUD2-206ENST00000438224 PCDH11XQ9BZA7 1347 aa11.65□□□□□ -0.54
HERPUD2-206ENST00000438224 PCDH11YQ9BZA8 1340 aa11.65□□□□□ -0.54
HERPUD2-206ENST00000438224 AEBP1Q8IUX7 1158 aa11.65□□□□□ -0.54
HERPUD2-206ENST00000438224 LRRC4BQ9NT99 713 aa11.65□□□□□ -0.54
HERPUD2-206ENST00000438224 IL13P35225 146 aa11.64□□□□□ -0.55
HERPUD2-206ENST00000438224 PDGFDQ9GZP0 370 aaPredicted RBP11.64□□□□□ -0.55
HERPUD2-206ENST00000438224 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
HERPUD2-206ENST00000438224 C5P01031 1676 aa11.63□□□□□ -0.55
HERPUD2-206ENST00000438224 MTHFSP49914 203 aa11.63□□□□□ -0.55
HERPUD2-206ENST00000438224 KCNQ4P56696 695 aa11.63□□□□□ -0.55
HERPUD2-206ENST00000438224 CNGB1Q14028 1251 aaPredicted RBP11.63□□□□□ -0.55
HERPUD2-206ENST00000438224 SYTL4Q96C24 671 aaPredicted RBP11.63□□□□□ -0.55
HERPUD2-206ENST00000438224 KDRP35968 1356 aa11.63□□□□□ -0.55
HERPUD2-206ENST00000438224 NKX1-1Q15270 411 aaPredicted RBP11.61□□□□□ -0.55
HERPUD2-206ENST00000438224 ZNF827Q17R98 1081 aa11.61□□□□□ -0.55
HERPUD2-206ENST00000438224 NBPF14Q5TI25 921 aa11.61□□□□□ -0.55
HERPUD2-206ENST00000438224 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.61□□□□□ -0.557e-8■■□□□ 12.6
HERPUD2-206ENST00000438224 SSUH2Q9Y2M2 353 aa11.61□□□□□ -0.55
HERPUD2-206ENST00000438224 KDM6AO15550 1401 aaPredicted RBP11.6□□□□□ -0.55
HERPUD2-206ENST00000438224 COL24A1Q17RW2 1714 aa11.6□□□□□ -0.55
HERPUD2-206ENST00000438224 UBR3Q6ZT12 1888 aa11.6□□□□□ -0.55
HERPUD2-206ENST00000438224 PLEKHG2Q9H7P9 1386 aa11.6□□□□□ -0.55
HERPUD2-206ENST00000438224 PHKG2P15735 406 aa11.6□□□□□ -0.55
HERPUD2-206ENST00000438224 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
HERPUD2-206ENST00000438224 SPG7Q9UQ90 795 aa11.6□□□□□ -0.55
HERPUD2-206ENST00000438224 SLC15A2Q16348 729 aa11.59□□□□□ -0.55
HERPUD2-206ENST00000438224 SULT6B1Q6IMI4 303 aa11.59□□□□□ -0.55
HERPUD2-206ENST00000438224 ADAMTS7Q9UKP4 1686 aa11.59□□□□□ -0.55
HERPUD2-206ENST00000438224 SPDYE2BA6NHP3 402 aa11.58□□□□□ -0.56
HERPUD2-206ENST00000438224 GTPBP6O43824 516 aaPredicted RBP11.58□□□□□ -0.56
HERPUD2-206ENST00000438224 SPDYE6P0CI01 402 aa11.58□□□□□ -0.56
HERPUD2-206ENST00000438224 SPDYE2Q495Y8 402 aa11.58□□□□□ -0.56
HERPUD2-206ENST00000438224 MPRIPQ6WCQ1 1025 aa11.58□□□□□ -0.56
HERPUD2-206ENST00000438224 PIGBQ92521 554 aa11.58□□□□□ -0.56
HERPUD2-206ENST00000438224 RNF25Q96BH1 459 aaPredicted RBP11.58□□□□□ -0.56
HERPUD2-206ENST00000438224 C4BP0C0L5 1744 aa11.57□□□□□ -0.56
HERPUD2-206ENST00000438224 PALLDQ8WX93 1383 aa11.57□□□□□ -0.56
HERPUD2-206ENST00000438224 HMOX1P09601 288 aa11.57□□□□□ -0.56
HERPUD2-206ENST00000438224 ZNF530Q6P9A1 599 aaPredicted RBP11.57□□□□□ -0.56
HERPUD2-206ENST00000438224 IFNL2Q8IZJ0 200 aa11.57□□□□□ -0.56
HERPUD2-206ENST00000438224 AKT1S1Q96B36 256 aa11.57□□□□□ -0.56
HERPUD2-206ENST00000438224 STK32BQ9NY57 414 aa11.57□□□□□ -0.56
HERPUD2-206ENST00000438224 MYH14Q7Z406 1995 aaKnown RBP11.57□□□□□ -0.56
HERPUD2-206ENST00000438224 COL5A3P25940 1745 aaPredicted RBP11.57□□□□□ -0.56
HERPUD2-206ENST00000438224 SLC27A3Q5K4L6 730 aa11.56□□□□□ -0.56
HERPUD2-206ENST00000438224 ZNF831Q5JPB2 1677 aa11.55□□□□□ -0.56
HERPUD2-206ENST00000438224 SIPA1L3O60292 1781 aaPredicted RBP11.55□□□□□ -0.56
HERPUD2-206ENST00000438224 DIAPH1O60610 1272 aaKnown RBP11.55□□□□□ -0.56
HERPUD2-206ENST00000438224 ZBTB7AO95365 584 aa11.55□□□□□ -0.56
HERPUD2-206ENST00000438224 PPP2R1AP30153 589 aa11.55□□□□□ -0.56
HERPUD2-206ENST00000438224 PLEKHO1Q53GL0 409 aaPredicted RBP11.55□□□□□ -0.56
HERPUD2-206ENST00000438224 CCNL1Q9UK58 526 aaPredicted RBP11.55□□□□□ -0.56
HERPUD2-206ENST00000438224 PNPLA7Q6ZV29 1317 aa11.55□□□□□ -0.56
HERPUD2-206ENST00000438224 TJP1Q07157 1748 aa11.55□□□□□ -0.56
HERPUD2-206ENST00000438224 DLG5Q8TDM6 1919 aa11.54□□□□□ -0.56
HERPUD2-206ENST00000438224 PTGER2P43116 358 aa11.54□□□□□ -0.56
HERPUD2-206ENST00000438224 ASAP1Q9ULH1 1129 aa11.54□□□□□ -0.56
HERPUD2-206ENST00000438224 MRC1P22897 1456 aa11.53□□□□□ -0.56
HERPUD2-206ENST00000438224 AMOTQ4VCS5 1084 aa11.53□□□□□ -0.56
HERPUD2-206ENST00000438224 AMIGO3Q86WK7 504 aa11.53□□□□□ -0.56
HERPUD2-206ENST00000438224 SGIP1Q9BQI5 828 aa11.53□□□□□ -0.56
HERPUD2-206ENST00000438224 SPON1Q9HCB6 807 aa11.53□□□□□ -0.56
HERPUD2-206ENST00000438224 ATG3Q9NT62 314 aa11.53□□□□□ -0.56
HERPUD2-206ENST00000438224 TMOD3Q9NYL9 352 aa11.53□□□□□ -0.56
HERPUD2-206ENST00000438224 CICQ96RK0 1608 aaPredicted RBP11.53□□□□□ -0.56
HERPUD2-206ENST00000438224 UBR2Q8IWV8 1755 aa11.52□□□□□ -0.57
HERPUD2-206ENST00000438224 GSE1Q14687 1217 aa11.52□□□□□ -0.57
HERPUD2-206ENST00000438224 DCAF5Q96JK2 942 aa11.52□□□□□ -0.57
HERPUD2-206ENST00000438224 SLC4A9Q96Q91 983 aa11.52□□□□□ -0.57
HERPUD2-206ENST00000438224 ERVV-2B6SEH9 535 aa11.51□□□□□ -0.57
HERPUD2-206ENST00000438224 U2SURPO15042 1029 aaKnown RBP11.51□□□□□ -0.57
HERPUD2-206ENST00000438224 ITPK1Q13572 414 aa11.51□□□□□ -0.57
HERPUD2-206ENST00000438224 MTHFSDQ2M296 383 aaKnown RBP11.51□□□□□ -0.57
HERPUD2-206ENST00000438224 SMIM5Q71RC9 77 aa11.51□□□□□ -0.57
HERPUD2-206ENST00000438224 LINC00116Q8NCU8 138 aa11.51□□□□□ -0.57
HERPUD2-206ENST00000438224 SMARCC1Q92922 1105 aaPredicted RBP11.51□□□□□ -0.57
HERPUD2-206ENST00000438224 C4AP0C0L4 1744 aa11.51□□□□□ -0.57
HERPUD2-206ENST00000438224 LOC102724428A0A0B4J2F2 783 aa11.5□□□□□ -0.57
HERPUD2-206ENST00000438224 SIK1P57059 783 aa11.5□□□□□ -0.57
HERPUD2-206ENST00000438224 DDX10Q13206 875 aaKnown RBP11.5□□□□□ -0.57
HERPUD2-206ENST00000438224 C1orf141Q5JVX7 400 aa11.5□□□□□ -0.57
HERPUD2-206ENST00000438224 LGR6Q9HBX8 967 aa11.5□□□□□ -0.57
HERPUD2-206ENST00000438224 RIOK3O14730 519 aaKnown RBP11.49□□□□□ -0.57
HERPUD2-206ENST00000438224 HSP90AB1P08238 724 aaKnown RBP11.49□□□□□ -0.57
HERPUD2-206ENST00000438224 AKAP4Q5JQC9 854 aa11.49□□□□□ -0.57
HERPUD2-206ENST00000438224 COL23A1Q86Y22 540 aaPredicted RBP11.49□□□□□ -0.57
HERPUD2-206ENST00000438224 MTFR1LQ9H019 292 aa11.49□□□□□ -0.57
HERPUD2-206ENST00000438224 RSPH6AQ9H0K4 717 aa11.49□□□□□ -0.57
HERPUD2-206ENST00000438224 TFCP2L1Q9NZI6 479 aa11.49□□□□□ -0.57
HERPUD2-206ENST00000438224 RNMTO43148 476 aaKnown RBP11.48□□□□□ -0.57
HERPUD2-206ENST00000438224 NFATC2IPQ8NCF5 419 aa11.48□□□□□ -0.57
HERPUD2-206ENST00000438224 PHACTR3Q96KR7 559 aa11.48□□□□□ -0.57
HERPUD2-206ENST00000438224 KCPQ6ZWJ8 1503 aa11.48□□□□□ -0.57
HERPUD2-206ENST00000438224 PRKAR2BP31323 418 aa11.47□□□□□ -0.57
HERPUD2-206ENST00000438224 CABP4P57796 275 aa11.47□□□□□ -0.57
HERPUD2-206ENST00000438224 CFAP53Q96M91 514 aa11.47□□□□□ -0.57
HERPUD2-206ENST00000438224 MAP3K5Q99683 1374 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms