RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 DACH1Q9UI36 760 aa12.13□□□□□ -0.47
SHPRH-206ENST00000438092 CDKL5O76039 1030 aa12.13□□□□□ -0.47
SHPRH-206ENST00000438092 MBD3O95983 291 aa12.13□□□□□ -0.47
SHPRH-206ENST00000438092 PIP4K2AP48426 406 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-206ENST00000438092 SKAP1Q86WV1 359 aa12.13□□□□□ -0.47
SHPRH-206ENST00000438092 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
SHPRH-206ENST00000438092 ACSBG1Q96GR2 724 aa12.12□□□□□ -0.47
SHPRH-206ENST00000438092 STAC3Q96MF2 364 aa12.12□□□□□ -0.47
SHPRH-206ENST00000438092 NAPBQ9H115 298 aa12.12□□□□□ -0.47
SHPRH-206ENST00000438092 GOLGA6L10A6NI86 522 aa12.12□□□□□ -0.47
SHPRH-206ENST00000438092 ZNF444Q8N0Y2 327 aaPredicted RBP12.12□□□□□ -0.47
SHPRH-206ENST00000438092 CTNNA3Q9UI47 895 aa12.12□□□□□ -0.47
SHPRH-206ENST00000438092 PRPF40BQ6NWY9 871 aaKnown RBP12.12□□□□□ -0.47
SHPRH-206ENST00000438092 TMPOP42166 694 aaKnown RBP12.12□□□□□ -0.47
SHPRH-206ENST00000438092 CCDC184Q52MB2 194 aa12.12□□□□□ -0.47
SHPRH-206ENST00000438092 ATP5J2-PTCD1G3V325 749 aa12.12□□□□□ -0.47
SHPRH-206ENST00000438092 CHRNA2Q15822 529 aa12.12□□□□□ -0.47
SHPRH-206ENST00000438092 WDR33Q9C0J8 1336 aaKnown RBP12.11□□□□□ -0.47
SHPRH-206ENST00000438092 IFIT5Q13325 482 aaKnown RBP12.11□□□□□ -0.47
SHPRH-206ENST00000438092 TAF7Q15545 349 aaPredicted RBP12.11□□□□□ -0.47
SHPRH-206ENST00000438092 NFE2L2Q16236 605 aa12.11□□□□□ -0.47
SHPRH-206ENST00000438092 SLC52A1Q9NWF4 448 aa12.11□□□□□ -0.47
SHPRH-206ENST00000438092 FANCIQ9NVI1 1328 aa12.11□□□□□ -0.47
SHPRH-206ENST00000438092 BRPF3Q9ULD4 1205 aa12.11□□□□□ -0.47
SHPRH-206ENST00000438092 CCT2P78371 535 aaKnown RBP12.11□□□□□ -0.47
SHPRH-206ENST00000438092 TNIP1Q15025 636 aa12.11□□□□□ -0.47
SHPRH-206ENST00000438092 LUC7LQ9NQ29 371 aaKnown RBP12.1□□□□□ -0.47
SHPRH-206ENST00000438092 FEZ1Q99689 392 aa12.1□□□□□ -0.47
SHPRH-206ENST00000438092 UPF3BQ9BZI7 483 aaKnown RBP12.1□□□□□ -0.47
SHPRH-206ENST00000438092 FBXO31Q5XUX0 539 aaPredicted RBP12.1□□□□□ -0.47
SHPRH-206ENST00000438092 F8W031 263 aaPredicted RBP12.1□□□□□ -0.47
SHPRH-206ENST00000438092 SNRKQ9NRH2 765 aa12.1□□□□□ -0.47
SHPRH-206ENST00000438092 SNAPC4Q5SXM2 1469 aa12.1□□□□□ -0.47
SHPRH-206ENST00000438092 POGZQ7Z3K3 1410 aa12.1□□□□□ -0.47
SHPRH-206ENST00000438092 CASKIN1Q8WXD9 1431 aa12.1□□□□□ -0.47
SHPRH-206ENST00000438092 ZRSR2Q15696 482 aaKnown RBP12.1□□□□□ -0.47
SHPRH-206ENST00000438092 SPTY2D1Q68D10 685 aaPredicted RBP12.1□□□□□ -0.47
SHPRH-206ENST00000438092 KCNH5Q8NCM2 988 aa12.09□□□□□ -0.47
SHPRH-206ENST00000438092 CCDC61Q9Y6R9 512 aa12.09□□□□□ -0.47
SHPRH-206ENST00000438092 PDE3AQ14432 1141 aa12.09□□□□□ -0.47
SHPRH-206ENST00000438092 EXOC5O00471 708 aa12.09□□□□□ -0.47
SHPRH-206ENST00000438092 AAMPQ13685 434 aa12.09□□□□□ -0.47
SHPRH-206ENST00000438092 WDR63Q8IWG1 891 aa12.09□□□□□ -0.47
SHPRH-206ENST00000438092 MACROD2A1Z1Q3 448 aa12.09□□□□□ -0.47
SHPRH-206ENST00000438092 AKAP2Q9Y2D5 859 aa12.09□□□□□ -0.47
SHPRH-206ENST00000438092 DESP17661 470 aa12.08□□□□□ -0.47
SHPRH-206ENST00000438092 CFAP100Q494V2 611 aa12.08□□□□□ -0.47
SHPRH-206ENST00000438092 PPP4R3AQ6IN85 833 aa12.08□□□□□ -0.47
SHPRH-206ENST00000438092 NUP62CLQ9H1M0 184 aa12.08□□□□□ -0.47
SHPRH-206ENST00000438092 EMILIN1Q9Y6C2 1016 aa12.08□□□□□ -0.47
SHPRH-206ENST00000438092 CCP110O43303 1012 aa12.08□□□□□ -0.48
SHPRH-206ENST00000438092 AMOTL2Q9Y2J4 779 aa12.08□□□□□ -0.48
SHPRH-206ENST00000438092 SLC5A1P13866 664 aa12.08□□□□□ -0.48
SHPRH-206ENST00000438092 GBP2P32456 591 aaPredicted RBP12.08□□□□□ -0.48
SHPRH-206ENST00000438092 CCDC113Q9H0I3 377 aa12.08□□□□□ -0.48
SHPRH-206ENST00000438092 HSP90AB3PQ58FF7 597 aa12.08□□□□□ -0.48
SHPRH-206ENST00000438092 WDHD1O75717 1129 aaPredicted RBP12.08□□□□□ -0.48
SHPRH-206ENST00000438092 FBLN1P23142 703 aa12.08□□□□□ -0.48
SHPRH-206ENST00000438092 CFAP45Q9UL16 551 aa12.08□□□□□ -0.48
SHPRH-206ENST00000438092 HAND2P61296 217 aa12.08□□□□□ -0.48
SHPRH-206ENST00000438092 LARP1Q6PKG0 1096 aaKnown RBP12.08□□□□□ -0.48
SHPRH-206ENST00000438092 KIAA1107Q9UPP5 1409 aa12.08□□□□□ -0.48
SHPRH-206ENST00000438092 RFC4P35249 363 aa12.07□□□□□ -0.48
SHPRH-206ENST00000438092 ANAPC15P60006 121 aa12.07□□□□□ -0.48
SHPRH-206ENST00000438092 TSHZ3Q63HK5 1081 aa12.07□□□□□ -0.48
SHPRH-206ENST00000438092 ISM2Q6H9L7 571 aa12.07□□□□□ -0.48
SHPRH-206ENST00000438092 CTNNBL1Q8WYA6 563 aaPredicted RBP12.07□□□□□ -0.48
SHPRH-206ENST00000438092 MMRN2Q9H8L6 949 aa12.07□□□□□ -0.48
SHPRH-206ENST00000438092 A0A087WZG4 1122 aa12.07□□□□□ -0.48
SHPRH-206ENST00000438092 CALRP27797 417 aaKnown RBP12.07□□□□□ -0.48
SHPRH-206ENST00000438092 ANKRD18AQ8IVF6 992 aa12.07□□□□□ -0.48
SHPRH-206ENST00000438092 ANXA1P04083 346 aa12.07□□□□□ -0.48
SHPRH-206ENST00000438092 CUL5Q93034 780 aa12.07□□□□□ -0.48
SHPRH-206ENST00000438092 SAMM50Q9Y512 469 aa12.07□□□□□ -0.48
SHPRH-206ENST00000438092 LEKR1Q6ZMV7 388 aa12.07□□□□□ -0.48
SHPRH-206ENST00000438092 IQSEC3Q9UPP2 1182 aaPredicted RBP12.07□□□□□ -0.48
SHPRH-206ENST00000438092 EPB41L2O43491 1005 aaKnown RBP12.07□□□□□ -0.48
SHPRH-206ENST00000438092 NLRP5P59047 1200 aa12.07□□□□□ -0.48
SHPRH-206ENST00000438092 MAP3K12Q12852 859 aa12.07□□□□□ -0.48
SHPRH-206ENST00000438092 KRT28Q7Z3Y7 464 aa12.07□□□□□ -0.48
SHPRH-206ENST00000438092 KIF1BPQ96EK5 621 aa12.07□□□□□ -0.48
SHPRH-206ENST00000438092 U3KPZ7 1027 aaPredicted RBP12.07□□□□□ -0.48
SHPRH-206ENST00000438092 ANKRD18BA2A2Z9 1011 aa12.06□□□□□ -0.48
SHPRH-206ENST00000438092 FCHSD2O94868 740 aa12.06□□□□□ -0.48
SHPRH-206ENST00000438092 WASF1Q92558 559 aa12.06□□□□□ -0.48
SHPRH-206ENST00000438092 ZNF287Q9HBT7 754 aa12.06□□□□□ -0.48
SHPRH-206ENST00000438092 CLEC11AQ9Y240 323 aa12.06□□□□□ -0.48
SHPRH-206ENST00000438092 ZNF213O14771 459 aa12.06□□□□□ -0.48
SHPRH-206ENST00000438092 ANKRD30BQ9BXX2 1392 aa12.06□□□□□ -0.48
SHPRH-206ENST00000438092 MAP3K2Q9Y2U5 619 aa12.06□□□□□ -0.48
SHPRH-206ENST00000438092 SLC12A7Q9Y666 1083 aa12.06□□□□□ -0.48
SHPRH-206ENST00000438092 IFIT3O14879 490 aaKnown RBP12.06□□□□□ -0.48
SHPRH-206ENST00000438092 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.06□□□□□ -0.48
SHPRH-206ENST00000438092 PANK2Q9BZ23 570 aa12.06□□□□□ -0.48
SHPRH-206ENST00000438092 CBFA2T2O43439 604 aa12.06□□□□□ -0.48
SHPRH-206ENST00000438092 CPLX3Q8WVH0 158 aa12.06□□□□□ -0.48
SHPRH-206ENST00000438092 CDK13Q14004 1512 aaKnown RBP12.06□□□□□ -0.48
SHPRH-206ENST00000438092 TRIM21P19474 475 aaKnown RBP12.06□□□□□ -0.48
SHPRH-206ENST00000438092 VTI1AQ96AJ9 217 aa12.06□□□□□ -0.48
SHPRH-206ENST00000438092 GOPCQ9HD26 462 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms