RNA–Protein interactions for RNA: ENST00000437900.1

LINC01007-202, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best)

Gene LINC01007, Length 1,485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-202ENST00000437900 SOS1Q07889 1333 aaPredicted RBP18.52■□□□□ 0.55
LINC01007-202ENST00000437900 ZNF772Q68DY9 489 aaPredicted RBP18.52■□□□□ 0.55
LINC01007-202ENST00000437900 QTRT2Q9H974 415 aaKnown RBP18.51■□□□□ 0.55
LINC01007-202ENST00000437900 MIS18AQ9NYP9 233 aa18.51■□□□□ 0.55
LINC01007-202ENST00000437900 BTBD11A6QL63 1104 aa18.5■□□□□ 0.55
LINC01007-202ENST00000437900 SUPT16HQ9Y5B9 1047 aaKnown RBP18.5■□□□□ 0.55
LINC01007-202ENST00000437900 TOGARAM1Q9Y4F4 1720 aa18.49■□□□□ 0.55
LINC01007-202ENST00000437900 RARSP54136 660 aaKnown RBP18.49■□□□□ 0.55
LINC01007-202ENST00000437900 CABP4P57796 275 aa18.49■□□□□ 0.55
LINC01007-202ENST00000437900 C8orf58Q8NAV2 365 aa18.49■□□□□ 0.55
LINC01007-202ENST00000437900 NFATC2IPQ8NCF5 419 aa18.49■□□□□ 0.55
LINC01007-202ENST00000437900 VAMP4O75379 141 aa18.48■□□□□ 0.55
LINC01007-202ENST00000437900 TWISTNBQ3B726 338 aaPredicted RBP18.48■□□□□ 0.55
LINC01007-202ENST00000437900 MARCH10Q8NA82 808 aaPredicted RBP18.48■□□□□ 0.55
LINC01007-202ENST00000437900 HEG1Q9ULI3 1381 aa18.48■□□□□ 0.55
LINC01007-202ENST00000437900 TSPYL6Q8N831 410 aa18.47■□□□□ 0.55
LINC01007-202ENST00000437900 HOXB7P09629 217 aa18.46■□□□□ 0.55
LINC01007-202ENST00000437900 EIF4A1P60842 406 aaKnown RBP18.46■□□□□ 0.55
LINC01007-202ENST00000437900 ALDH1L2Q3SY69 923 aa18.46■□□□□ 0.55
LINC01007-202ENST00000437900 BCL9O00512 1426 aa18.46■□□□□ 0.55
LINC01007-202ENST00000437900 BRPF1P55201 1214 aaPredicted RBP18.46■□□□□ 0.54
LINC01007-202ENST00000437900 ZNF790Q6PG37 636 aa18.46■□□□□ 0.54
LINC01007-202ENST00000437900 RRP1P56182 461 aaKnown RBP18.45■□□□□ 0.54
LINC01007-202ENST00000437900 PAPPAQ13219 1627 aa18.44■□□□□ 0.54
LINC01007-202ENST00000437900 KRT24Q2M2I5 525 aa18.44■□□□□ 0.54
LINC01007-202ENST00000437900 KCNQ3O43525 872 aa18.43■□□□□ 0.54
LINC01007-202ENST00000437900 RBM6P78332 1123 aaKnown RBP18.43■□□□□ 0.54
LINC01007-202ENST00000437900 SSH1Q8WYL5 1049 aa18.43■□□□□ 0.54
LINC01007-202ENST00000437900 TMOD3Q9NYL9 352 aa18.43■□□□□ 0.54
LINC01007-202ENST00000437900 SEPT12Q8IYM1 358 aa18.42■□□□□ 0.54
LINC01007-202ENST00000437900 CHMP4AQ9BY43 222 aa18.42■□□□□ 0.54
LINC01007-202ENST00000437900 DOT1LQ8TEK3 1739 aa18.41■□□□□ 0.54
LINC01007-202ENST00000437900 ELL2O00472 640 aaPredicted RBP18.41■□□□□ 0.54
LINC01007-202ENST00000437900 BCAR3O75815 825 aa18.41■□□□□ 0.54
LINC01007-202ENST00000437900 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.41■□□□□ 0.54
LINC01007-202ENST00000437900 ITGB4P16144 1822 aa18.41■□□□□ 0.54
LINC01007-202ENST00000437900 UBR2Q8IWV8 1755 aa18.4■□□□□ 0.54
LINC01007-202ENST00000437900 A0A0G2JS52 829 aa18.4■□□□□ 0.54
LINC01007-202ENST00000437900 MYT1Q01538 1121 aa18.4■□□□□ 0.54
LINC01007-202ENST00000437900 TTC5Q8N0Z6 440 aa18.4■□□□□ 0.54
LINC01007-202ENST00000437900 PIGBQ92521 554 aa18.4■□□□□ 0.54
LINC01007-202ENST00000437900 GIGYF1O75420 1035 aaPredicted RBP18.39■□□□□ 0.54
LINC01007-202ENST00000437900 SLC39A6Q13433 755 aa18.39■□□□□ 0.54
LINC01007-202ENST00000437900 SMC4Q9NTJ3 1288 aa18.39■□□□□ 0.54
LINC01007-202ENST00000437900 KCPQ6ZWJ8 1503 aa18.39■□□□□ 0.53
LINC01007-202ENST00000437900 KIF16BQ96L93 1317 aa18.39■□□□□ 0.53
LINC01007-202ENST00000437900 NEFLP07196 543 aa18.39■□□□□ 0.53
LINC01007-202ENST00000437900 ZNF496Q96IT1 587 aaPredicted RBP18.39■□□□□ 0.53
LINC01007-202ENST00000437900 FMNL2Q96PY5 1086 aa18.39■□□□□ 0.53
LINC01007-202ENST00000437900 PRIM1P49642 420 aaKnown RBP18.38■□□□□ 0.53
LINC01007-202ENST00000437900 RGS17Q9UGC6 210 aaPredicted RBP18.38■□□□□ 0.53
LINC01007-202ENST00000437900 CCDC30Q5VVM6 783 aa18.37■□□□□ 0.53
LINC01007-202ENST00000437900 MRPL50Q8N5N7 158 aaKnown RBP18.37■□□□□ 0.53
LINC01007-202ENST00000437900 BCL2L13Q9BXK5 485 aa18.37■□□□□ 0.53
LINC01007-202ENST00000437900 SNRPA1P09661 255 aaKnown RBP18.35■□□□□ 0.53
LINC01007-202ENST00000437900 ARHGAP45Q92619 1136 aa18.35■□□□□ 0.53
LINC01007-202ENST00000437900 ATG3Q9NT62 314 aa18.35■□□□□ 0.53
LINC01007-202ENST00000437900 RXRBP28702 533 aa18.34■□□□□ 0.53
LINC01007-202ENST00000437900 PDE3AQ14432 1141 aa18.34■□□□□ 0.53
LINC01007-202ENST00000437900 HDGFL1Q5TGJ6 251 aa18.34■□□□□ 0.53
LINC01007-202ENST00000437900 VSIG10Q8N0Z9 540 aa18.34■□□□□ 0.53
LINC01007-202ENST00000437900 IPO8O15397 1037 aaKnown RBP18.33■□□□□ 0.53
LINC01007-202ENST00000437900 PLIN1O60240 522 aa18.33■□□□□ 0.53
LINC01007-202ENST00000437900 ERICH6BQ5W0A0 696 aa18.33■□□□□ 0.53
LINC01007-202ENST00000437900 SYTL4Q96C24 671 aaPredicted RBP18.33■□□□□ 0.53
LINC01007-202ENST00000437900 STK31Q9BXU1 1019 aa18.33■□□□□ 0.53
LINC01007-202ENST00000437900 ASAP1Q9ULH1 1129 aa18.33■□□□□ 0.53
LINC01007-202ENST00000437900 CACNA1FO60840 1977 aa18.33■□□□□ 0.53
LINC01007-202ENST00000437900 NHSQ6T4R5 1651 aa18.33■□□□□ 0.53
LINC01007-202ENST00000437900 ZKSCAN2Q63HK3 967 aa18.33■□□□□ 0.52
LINC01007-202ENST00000437900 C5P01031 1676 aa18.32■□□□□ 0.52
LINC01007-202ENST00000437900 ATF7IPQ6VMQ6 1270 aa18.32■□□□□ 0.52
LINC01007-202ENST00000437900 KRT27Q7Z3Y8 459 aa18.32■□□□□ 0.52
LINC01007-202ENST00000437900 ACSBG1Q96GR2 724 aa18.32■□□□□ 0.52
LINC01007-202ENST00000437900 NOB1Q9ULX3 412 aaKnown RBP18.32■□□□□ 0.52
LINC01007-202ENST00000437900 LAMB4A4D0S4 1761 aa18.31■□□□□ 0.52
LINC01007-202ENST00000437900 MS4A1P11836 297 aa18.31■□□□□ 0.52
LINC01007-202ENST00000437900 CANXP27824 592 aaKnown RBP18.31■□□□□ 0.52
LINC01007-202ENST00000437900 POTEAQ6S8J7 498 aa18.31■□□□□ 0.52
LINC01007-202ENST00000437900 FRAT1Q92837 279 aaPredicted RBP18.31■□□□□ 0.52
LINC01007-202ENST00000437900 GTF3C3Q9Y5Q9 886 aa18.31■□□□□ 0.52
LINC01007-202ENST00000437900 BRWD3Q6RI45 1802 aa18.3■□□□□ 0.52
LINC01007-202ENST00000437900 PRAMEF22A3QJZ6 481 aa18.3■□□□□ 0.52
LINC01007-202ENST00000437900 KCNQ2O43526 872 aa18.3■□□□□ 0.52
LINC01007-202ENST00000437900 SLC4A2P04920 1241 aa18.3■□□□□ 0.52
LINC01007-202ENST00000437900 TRIM27P14373 513 aa18.3■□□□□ 0.52
LINC01007-202ENST00000437900 FAM196AQ6ZSG2 479 aa18.3■□□□□ 0.52
LINC01007-202ENST00000437900 SMARCC1Q92922 1105 aaPredicted RBP18.3■□□□□ 0.52
LINC01007-202ENST00000437900 TEX13AQ9BXU3 409 aaPredicted RBP18.3■□□□□ 0.52
LINC01007-202ENST00000437900 DBF4Q9UBU7 674 aaPredicted RBP18.3■□□□□ 0.52
LINC01007-202ENST00000437900 PTPRCP08575 1304 aa18.3■□□□□ 0.52
LINC01007-202ENST00000437900 ERBB4Q15303 1308 aa18.3■□□□□ 0.52
LINC01007-202ENST00000437900 RGS12O14924 1447 aa18.3■□□□□ 0.52
LINC01007-202ENST00000437900 CICQ96RK0 1608 aaPredicted RBP18.3■□□□□ 0.52
LINC01007-202ENST00000437900 KAT6BQ8WYB5 2073 aa18.3■□□□□ 0.52
LINC01007-202ENST00000437900 TCERG1O14776 1098 aaKnown RBP18.29■□□□□ 0.52
LINC01007-202ENST00000437900 PTCD1O75127 700 aaKnown RBP18.29■□□□□ 0.52
LINC01007-202ENST00000437900 EIF2S2P20042 333 aaKnown RBP18.29■□□□□ 0.52
LINC01007-202ENST00000437900 FKBP8Q14318 412 aa18.29■□□□□ 0.52
LINC01007-202ENST00000437900 C20orf194Q5TEA3 1177 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms