RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 NFATC2IPQ8NCF5 419 aa19.46■□□□□ 0.71
CPNE1-215ENST00000437100 CAMKK2Q96RR4 588 aa19.46■□□□□ 0.71
CPNE1-215ENST00000437100 SIPA1L3O60292 1781 aaPredicted RBP19.45■□□□□ 0.7
CPNE1-215ENST00000437100 PAPPAQ13219 1627 aa19.45■□□□□ 0.7
CPNE1-215ENST00000437100 CCDC27Q2M243 656 aa19.45■□□□□ 0.7
CPNE1-215ENST00000437100 DEFB132Q7Z7B7 95 aa19.45■□□□□ 0.7
CPNE1-215ENST00000437100 VIRMAQ69YN4 1812 aaKnown RBP19.44■□□□□ 0.7
CPNE1-215ENST00000437100 BAG6P46379 1132 aa19.44■□□□□ 0.7
CPNE1-215ENST00000437100 THUMPD2Q9BTF0 503 aaKnown RBP19.44■□□□□ 0.7
CPNE1-215ENST00000437100 ATG3Q9NT62 314 aa19.44■□□□□ 0.7
CPNE1-215ENST00000437100 PALLDQ8WX93 1383 aa19.44■□□□□ 0.7
CPNE1-215ENST00000437100 EN1Q05925 392 aaPredicted RBP19.43■□□□□ 0.7
CPNE1-215ENST00000437100 TEFQ10587 303 aa19.43■□□□□ 0.7
CPNE1-215ENST00000437100 ASAP1Q9ULH1 1129 aa19.43■□□□□ 0.7
CPNE1-215ENST00000437100 NEUROD2Q15784 382 aa19.42■□□□□ 0.7
CPNE1-215ENST00000437100 PROM2Q8N271 834 aa19.42■□□□□ 0.7
CPNE1-215ENST00000437100 SMARCC1Q92922 1105 aaPredicted RBP19.42■□□□□ 0.7
CPNE1-215ENST00000437100 KCPQ6ZWJ8 1503 aa19.41■□□□□ 0.7
CPNE1-215ENST00000437100 KAT6BQ8WYB5 2073 aa19.4■□□□□ 0.7
CPNE1-215ENST00000437100 LY75O60449 1722 aa19.4■□□□□ 0.7
CPNE1-215ENST00000437100 EZH2Q15910 746 aaKnown RBP19.4■□□□□ 0.7
CPNE1-215ENST00000437100 NGEFQ8N5V2 710 aa19.4■□□□□ 0.7
CPNE1-215ENST00000437100 RREB1Q92766 1687 aa19.4■□□□□ 0.7
CPNE1-215ENST00000437100 TAF7Q15545 349 aaPredicted RBP19.39■□□□□ 0.69
CPNE1-215ENST00000437100 TXNRD1Q16881 649 aa19.39■□□□□ 0.69
CPNE1-215ENST00000437100 SLC39A6Q13433 755 aa19.38■□□□□ 0.69
CPNE1-215ENST00000437100 SLC27A3Q5K4L6 730 aa19.38■□□□□ 0.69
CPNE1-215ENST00000437100 WWC1Q8IX03 1113 aa19.38■□□□□ 0.69
CPNE1-215ENST00000437100 UBR2Q8IWV8 1755 aa19.37■□□□□ 0.69
CPNE1-215ENST00000437100 ZNF521Q96K83 1311 aa19.37■□□□□ 0.69
CPNE1-215ENST00000437100 BTBD11A6QL63 1104 aa19.37■□□□□ 0.69
CPNE1-215ENST00000437100 ZNF790Q6PG37 636 aa19.37■□□□□ 0.69
CPNE1-215ENST00000437100 SLC4A9Q96Q91 983 aa19.37■□□□□ 0.69
CPNE1-215ENST00000437100 LRRC4BQ9NT99 713 aa19.37■□□□□ 0.69
CPNE1-215ENST00000437100 BABAM1Q9NWV8 329 aa19.37■□□□□ 0.69
CPNE1-215ENST00000437100 CICQ96RK0 1608 aaPredicted RBP19.36■□□□□ 0.69
CPNE1-215ENST00000437100 SENP3-EIF4A1A0A087X0R7 540 aa19.36■□□□□ 0.69
CPNE1-215ENST00000437100 LOC102724428A0A0B4J2F2 783 aa19.36■□□□□ 0.69
CPNE1-215ENST00000437100 SIK1P57059 783 aa19.36■□□□□ 0.69
CPNE1-215ENST00000437100 ZNF831Q5JPB2 1677 aa19.36■□□□□ 0.69
CPNE1-215ENST00000437100 KCNQ3O43525 872 aa19.35■□□□□ 0.69
CPNE1-215ENST00000437100 ZNF853P0CG23 659 aa19.35■□□□□ 0.69
CPNE1-215ENST00000437100 KDM3BQ7LBC6 1761 aa19.34■□□□□ 0.69
CPNE1-215ENST00000437100 NUP188Q5SRE5 1749 aa19.34■□□□□ 0.69
CPNE1-215ENST00000437100 CHL1O00533 1208 aa19.34■□□□□ 0.69
CPNE1-215ENST00000437100 CCNL1Q9UK58 526 aaPredicted RBP19.34■□□□□ 0.69
CPNE1-215ENST00000437100 IL16Q14005 1332 aa19.33■□□□□ 0.69
CPNE1-215ENST00000437100 CALD1Q05682 793 aaKnown RBP19.33■□□□□ 0.68
CPNE1-215ENST00000437100 ZNF496Q96IT1 587 aaPredicted RBP19.33■□□□□ 0.68
CPNE1-215ENST00000437100 CFAP44Q96MT7 982 aa19.33■□□□□ 0.68
CPNE1-215ENST00000437100 IFT57Q9NWB7 429 aa19.33■□□□□ 0.68
CPNE1-215ENST00000437100 MIS18AQ9NYP9 233 aa19.33■□□□□ 0.68
CPNE1-215ENST00000437100 HEG1Q9ULI3 1381 aa19.32■□□□□ 0.68
CPNE1-215ENST00000437100 ITPK1Q13572 414 aa19.32■□□□□ 0.68
CPNE1-215ENST00000437100 WDR63Q8IWG1 891 aa19.32■□□□□ 0.68
CPNE1-215ENST00000437100 TTC5Q8N0Z6 440 aa19.32■□□□□ 0.68
CPNE1-215ENST00000437100 VSIG10Q8N0Z9 540 aa19.32■□□□□ 0.68
CPNE1-215ENST00000437100 PTCD1O75127 700 aaKnown RBP19.31■□□□□ 0.68
CPNE1-215ENST00000437100 KCNQ4P56696 695 aa19.31■□□□□ 0.68
CPNE1-215ENST00000437100 TSPYL4Q9UJ04 414 aa19.31■□□□□ 0.68
CPNE1-215ENST00000437100 EIF4A1P60842 406 aaKnown RBP19.3■□□□□ 0.68
CPNE1-215ENST00000437100 FMNL2Q96PY5 1086 aa19.3■□□□□ 0.68
CPNE1-215ENST00000437100 RBM42Q9BTD8 480 aaKnown RBP19.3■□□□□ 0.68
CPNE1-215ENST00000437100 SALL2Q9Y467 1007 aaPredicted RBP19.3■□□□□ 0.68
CPNE1-215ENST00000437100 TJP1Q07157 1748 aa19.3■□□□□ 0.68
CPNE1-215ENST00000437100 C5P01031 1676 aa19.3■□□□□ 0.68
CPNE1-215ENST00000437100 ATP6V1AP38606 617 aa19.29■□□□□ 0.68
CPNE1-215ENST00000437100 LINC00116Q8NCU8 138 aa19.29■□□□□ 0.68
CPNE1-215ENST00000437100 ANO8Q9HCE9 1232 aaPredicted RBP19.29■□□□□ 0.68
CPNE1-215ENST00000437100 GNAI1P63096 354 aa19.28■□□□□ 0.68
CPNE1-215ENST00000437100 AKT1S1Q96B36 256 aa19.28■□□□□ 0.68
CPNE1-215ENST00000437100 MBIPQ9NS73 344 aa19.28■□□□□ 0.68
CPNE1-215ENST00000437100 COL5A3P25940 1745 aaPredicted RBP19.27■□□□□ 0.68
CPNE1-215ENST00000437100 TAF1LQ8IZX4 1826 aa19.26■□□□□ 0.67
CPNE1-215ENST00000437100 HMGB2P26583 209 aaKnown RBP19.26■□□□□ 0.67
CPNE1-215ENST00000437100 DNAJC10Q8IXB1 793 aa19.26■□□□□ 0.67
CPNE1-215ENST00000437100 SPINK5Q9NQ38 1064 aaPredicted RBP19.26■□□□□ 0.67
CPNE1-215ENST00000437100 CNTNAP4Q9C0A0 1308 aa19.25■□□□□ 0.67
CPNE1-215ENST00000437100 ZNF827Q17R98 1081 aa19.25■□□□□ 0.67
CPNE1-215ENST00000437100 LAS1LQ9Y4W2 734 aaKnown RBP19.25■□□□□ 0.67
CPNE1-215ENST00000437100 C4BP0C0L5 1744 aa19.25■□□□□ 0.67
CPNE1-215ENST00000437100 GIGYF1O75420 1035 aaPredicted RBP19.24■□□□□ 0.67
CPNE1-215ENST00000437100 SNRPA1P09661 255 aaKnown RBP19.24■□□□□ 0.67
CPNE1-215ENST00000437100 CYP19A1P11511 503 aaPredicted RBP19.24■□□□□ 0.67
CPNE1-215ENST00000437100 PRAMEF22A3QJZ6 481 aa19.23■□□□□ 0.67
CPNE1-215ENST00000437100 RC3H1Q5TC82 1133 aaKnown RBP19.23■□□□□ 0.67
CPNE1-215ENST00000437100 FANCIQ9NVI1 1328 aa19.23■□□□□ 0.67
CPNE1-215ENST00000437100 HNRNPUQ00839 825 aaKnown RBP eCLIP19.22■□□□□ 0.67
CPNE1-215ENST00000437100 SLC15A2Q16348 729 aa19.22■□□□□ 0.67
CPNE1-215ENST00000437100 TSR2Q969E8 191 aaKnown RBP19.22■□□□□ 0.67
CPNE1-215ENST00000437100 TEX13AQ9BXU3 409 aaPredicted RBP19.22■□□□□ 0.67
CPNE1-215ENST00000437100 GOLGA2Q08379 1002 aa19.21■□□□□ 0.67
CPNE1-215ENST00000437100 KRT24Q2M2I5 525 aa19.21■□□□□ 0.67
CPNE1-215ENST00000437100 NBPF14Q5TI25 921 aa19.21■□□□□ 0.67
CPNE1-215ENST00000437100 INTS5Q6P9B9 1019 aaKnown RBP19.21■□□□□ 0.67
CPNE1-215ENST00000437100 STK32BQ9NY57 414 aa19.21■□□□□ 0.67
CPNE1-215ENST00000437100 USP16Q9Y5T5 823 aa19.21■□□□□ 0.67
CPNE1-215ENST00000437100 HOXB7P09629 217 aa19.2■□□□□ 0.66
CPNE1-215ENST00000437100 CRKLP46109 303 aaKnown RBP19.2■□□□□ 0.66
CPNE1-215ENST00000437100 AMIGO3Q86WK7 504 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms