RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 XPCQ01831 940 aaPredicted RBP18.66■□□□□ 0.58
PTPN13-204ENST00000436978 DHX29Q7Z478 1369 aaKnown RBP18.66■□□□□ 0.58
PTPN13-204ENST00000436978 IQCEQ6IPM2 695 aa18.65■□□□□ 0.58
PTPN13-204ENST00000436978 ZC3H6P61129 1189 aaKnown RBP18.65■□□□□ 0.58
PTPN13-204ENST00000436978 PTPRCP08575 1304 aa18.65■□□□□ 0.58
PTPN13-204ENST00000436978 JAKMIP1Q96N16 626 aaKnown RBP18.64■□□□□ 0.58
PTPN13-204ENST00000436978 CWC15Q9P013 229 aaKnown RBP18.64■□□□□ 0.58
PTPN13-204ENST00000436978 SPATA32Q96LK8 384 aa18.64■□□□□ 0.57
PTPN13-204ENST00000436978 IFIT1P09914 478 aaKnown RBP18.64■□□□□ 0.57
PTPN13-204ENST00000436978 STK11IPQ8N1F8 1099 aa18.64■□□□□ 0.57
PTPN13-204ENST00000436978 GLRX3O76003 335 aaKnown RBP18.64■□□□□ 0.57
PTPN13-204ENST00000436978 ANKIB1Q9P2G1 1089 aa18.64■□□□□ 0.57
PTPN13-204ENST00000436978 SLFN5Q08AF3 891 aa18.64■□□□□ 0.57
PTPN13-204ENST00000436978 ZRSR2Q15696 482 aaKnown RBP18.64■□□□□ 0.57
PTPN13-204ENST00000436978 PDCL3Q9H2J4 239 aa18.64■□□□□ 0.57
PTPN13-204ENST00000436978 ZHX3Q9H4I2 956 aa18.63■□□□□ 0.57
PTPN13-204ENST00000436978 ADGBQ8N7X0 1667 aa18.63■□□□□ 0.57
PTPN13-204ENST00000436978 ANKRD18AQ8IVF6 992 aa18.63■□□□□ 0.57
PTPN13-204ENST00000436978 RNF214Q8ND24 703 aa18.63■□□□□ 0.57
PTPN13-204ENST00000436978 TANGO6Q9C0B7 1094 aa18.63■□□□□ 0.57
PTPN13-204ENST00000436978 FMNL2Q96PY5 1086 aa18.63■□□□□ 0.57
PTPN13-204ENST00000436978 PAF1Q8N7H5 531 aa18.63■□□□□ 0.57
PTPN13-204ENST00000436978 IDH1O75874 414 aaKnown RBP18.63■□□□□ 0.57
PTPN13-204ENST00000436978 SLC5A1P13866 664 aa18.63■□□□□ 0.57
PTPN13-204ENST00000436978 CIZ1Q9ULV3 898 aaPredicted RBP18.63■□□□□ 0.57
PTPN13-204ENST00000436978 RALGAPBQ86X10 1494 aa18.62■□□□□ 0.57
PTPN13-204ENST00000436978 CCDC196A0A1B0GTZ2 297 aa18.62■□□□□ 0.57
PTPN13-204ENST00000436978 WASLO00401 505 aaPredicted RBP18.62■□□□□ 0.57
PTPN13-204ENST00000436978 GOLGA6L10A6NI86 522 aa18.62■□□□□ 0.57
PTPN13-204ENST00000436978 HMGB1P09429 215 aaKnown RBP18.62■□□□□ 0.57
PTPN13-204ENST00000436978 CASTP20810 708 aaKnown RBP18.62■□□□□ 0.57
PTPN13-204ENST00000436978 BICDL1Q6ZP65 573 aa18.62■□□□□ 0.57
PTPN13-204ENST00000436978 USP5P45974 858 aa18.62■□□□□ 0.57
PTPN13-204ENST00000436978 SMTNL1A8MU46 457 aa18.61■□□□□ 0.57
PTPN13-204ENST00000436978 IFIT5Q13325 482 aaKnown RBP18.61■□□□□ 0.57
PTPN13-204ENST00000436978 RPGRQ92834 1020 aaKnown RBP18.61■□□□□ 0.57
PTPN13-204ENST00000436978 TEX13AQ9BXU3 409 aaPredicted RBP18.61■□□□□ 0.57
PTPN13-204ENST00000436978 MATR3P43243 847 aaKnown RBP eCLIP18.61■□□□□ 0.57
PTPN13-204ENST00000436978 HMGN5P82970 282 aaKnown RBP18.61■□□□□ 0.57
PTPN13-204ENST00000436978 WAPLQ7Z5K2 1190 aa18.61■□□□□ 0.57
PTPN13-204ENST00000436978 MAP7D2Q96T17 732 aa18.61■□□□□ 0.57
PTPN13-204ENST00000436978 NOS1P29475 1434 aa18.61■□□□□ 0.57
PTPN13-204ENST00000436978 PPP1R12BO60237 982 aaPredicted RBP18.61■□□□□ 0.57
PTPN13-204ENST00000436978 TMEM57Q8N5G2 664 aa18.61■□□□□ 0.57
PTPN13-204ENST00000436978 RPRD2Q5VT52 1461 aaKnown RBP18.6■□□□□ 0.57
PTPN13-204ENST00000436978 WDHD1O75717 1129 aaPredicted RBP18.6■□□□□ 0.57
PTPN13-204ENST00000436978 PHAXQ9H814 394 aaKnown RBP18.6■□□□□ 0.57
PTPN13-204ENST00000436978 MX1P20591 662 aa18.6■□□□□ 0.57
PTPN13-204ENST00000436978 DZIP1Q86YF9 867 aaKnown RBP18.6■□□□□ 0.57
PTPN13-204ENST00000436978 MAP3K12Q12852 859 aa18.59■□□□□ 0.57
PTPN13-204ENST00000436978 CCDC181Q5TID7 509 aa18.59■□□□□ 0.57
PTPN13-204ENST00000436978 PHF8Q9UPP1 1060 aa18.59■□□□□ 0.57
PTPN13-204ENST00000436978 MCM10Q7L590 875 aa18.59■□□□□ 0.57
PTPN13-204ENST00000436978 ASXL1Q8IXJ9 1541 aa18.58■□□□□ 0.57
PTPN13-204ENST00000436978 EHMT1Q9H9B1 1298 aa18.58■□□□□ 0.57
PTPN13-204ENST00000436978 AMOTL2Q9Y2J4 779 aa18.58■□□□□ 0.57
PTPN13-204ENST00000436978 ZNF397Q8NF99 534 aaPredicted RBP18.58■□□□□ 0.57
PTPN13-204ENST00000436978 UGGT2Q9NYU1 1516 aa18.58■□□□□ 0.57
PTPN13-204ENST00000436978 POLR3DP05423 398 aaPredicted RBP18.58■□□□□ 0.56
PTPN13-204ENST00000436978 ZNF518AQ6AHZ1 1483 aa18.58■□□□□ 0.56
PTPN13-204ENST00000436978 ABCF2Q9UG63 623 aa18.58■□□□□ 0.56
PTPN13-204ENST00000436978 CRACR2BQ8N4Y2 399 aaPredicted RBP18.58■□□□□ 0.56
PTPN13-204ENST00000436978 SPINK5Q9NQ38 1064 aaPredicted RBP18.58■□□□□ 0.56
PTPN13-204ENST00000436978 FBXO3Q9UK99 471 aa18.58■□□□□ 0.56
PTPN13-204ENST00000436978 MYD88Q99836 296 aa18.57■□□□□ 0.56
PTPN13-204ENST00000436978 ANKRD36BQ8N2N9 1353 aa18.57■□□□□ 0.56
PTPN13-204ENST00000436978 PPP4R3AQ6IN85 833 aa18.57■□□□□ 0.56
PTPN13-204ENST00000436978 POTEJP0CG39 1038 aa18.57■□□□□ 0.56
PTPN13-204ENST00000436978 NAPBQ9H115 298 aa18.57■□□□□ 0.56
PTPN13-204ENST00000436978 MKNK2Q9HBH9 465 aa18.57■□□□□ 0.56
PTPN13-204ENST00000436978 CFAP74Q9C0B2 1584 aa18.57■□□□□ 0.56
PTPN13-204ENST00000436978 TTF1Q15361 905 aaPredicted RBP18.57■□□□□ 0.56
PTPN13-204ENST00000436978 RNF41Q9H4P4 317 aaPredicted RBP18.57■□□□□ 0.56
PTPN13-204ENST00000436978 SYCP2Q9BX26 1530 aa18.56■□□□□ 0.56
PTPN13-204ENST00000436978 KIAA0556O60303 1618 aa18.56■□□□□ 0.56
PTPN13-204ENST00000436978 DBF4Q9UBU7 674 aaPredicted RBP18.56■□□□□ 0.56
PTPN13-204ENST00000436978 ANKRD18BA2A2Z9 1011 aa18.56■□□□□ 0.56
PTPN13-204ENST00000436978 SEPT7Q16181 437 aaKnown RBP18.56■□□□□ 0.56
PTPN13-204ENST00000436978 NUP62CLQ9H1M0 184 aa18.56■□□□□ 0.56
PTPN13-204ENST00000436978 BACH2Q9BYV9 841 aa18.56■□□□□ 0.56
PTPN13-204ENST00000436978 MSH6P52701 1360 aa18.56■□□□□ 0.56
PTPN13-204ENST00000436978 A0A087WZG4 1122 aa18.55■□□□□ 0.56
PTPN13-204ENST00000436978 RAB34Q9BZG1 259 aa18.55■□□□□ 0.56
PTPN13-204ENST00000436978 SH2B1Q9NRF2 756 aaPredicted RBP18.55■□□□□ 0.56
PTPN13-204ENST00000436978 CCDC191Q8NCU4 936 aa18.55■□□□□ 0.56
PTPN13-204ENST00000436978 EIF4G3O43432 1585 aaKnown RBP18.55■□□□□ 0.56
PTPN13-204ENST00000436978 TNRQ92752 1358 aa18.55■□□□□ 0.56
PTPN13-204ENST00000436978 SPC24Q8NBT2 197 aa18.55■□□□□ 0.56
PTPN13-204ENST00000436978 IL1RAPL2Q9NP60 686 aa18.55■□□□□ 0.56
PTPN13-204ENST00000436978 PTCD1O75127 700 aaKnown RBP18.54■□□□□ 0.56
PTPN13-204ENST00000436978 CUL5Q93034 780 aa18.54■□□□□ 0.56
PTPN13-204ENST00000436978 MPRIPQ6WCQ1 1025 aa18.54■□□□□ 0.56
PTPN13-204ENST00000436978 ADAMTS12P58397 1594 aa18.54■□□□□ 0.56
PTPN13-204ENST00000436978 IQCA1Q86XH1 822 aa18.53■□□□□ 0.56
PTPN13-204ENST00000436978 NUTM1Q86Y26 1132 aa18.53■□□□□ 0.56
PTPN13-204ENST00000436978 SSBP05455 408 aaKnown RBP eCLIP18.53■□□□□ 0.56
PTPN13-204ENST00000436978 MIS18AQ9NYP9 233 aa18.53■□□□□ 0.56
PTPN13-204ENST00000436978 EXOC5O00471 708 aa18.53■□□□□ 0.56
PTPN13-204ENST00000436978 DNAAF4Q8WXU2 420 aa18.53■□□□□ 0.56
PTPN13-204ENST00000436978 PIK3R4Q99570 1358 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms