RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 SLC15A2Q16348 729 aa27.92■■■□□ 2.06
GTF3A-203ENST00000435781 ATG3Q9NT62 314 aa27.92■■■□□ 2.06
GTF3A-203ENST00000435781 ZNF827Q17R98 1081 aa27.9■■■□□ 2.06
GTF3A-203ENST00000435781 NFATC2IPQ8NCF5 419 aa27.9■■■□□ 2.06
GTF3A-203ENST00000435781 ZNF831Q5JPB2 1677 aa27.9■■■□□ 2.06
GTF3A-203ENST00000435781 GNAT3A8MTJ3 354 aa27.89■■■□□ 2.06
GTF3A-203ENST00000435781 SLC52A2Q9HAB3 445 aa27.89■■■□□ 2.06
GTF3A-203ENST00000435781 LRP5O75197 1615 aa27.89■■■□□ 2.05
GTF3A-203ENST00000435781 AKT1S1Q96B36 256 aa27.88■■■□□ 2.05
GTF3A-203ENST00000435781 C4BP0C0L5 1744 aa27.87■■■□□ 2.05
GTF3A-203ENST00000435781 LOC102724428A0A0B4J2F2 783 aa27.87■■■□□ 2.05
GTF3A-203ENST00000435781 SIK1P57059 783 aa27.87■■■□□ 2.05
GTF3A-203ENST00000435781 PLEKHF1Q96S99 279 aa27.87■■■□□ 2.05
GTF3A-203ENST00000435781 IL17REQ8NFR9 667 aa27.85■■■□□ 2.05
GTF3A-203ENST00000435781 COL5A3P25940 1745 aaPredicted RBP27.84■■■□□ 2.05
GTF3A-203ENST00000435781 NEFMP07197 916 aa27.84■■■□□ 2.05
GTF3A-203ENST00000435781 PNNQ9H307 717 aaKnown RBP27.84■■■□□ 2.05
GTF3A-203ENST00000435781 UBR2Q8IWV8 1755 aa27.83■■■□□ 2.05
GTF3A-203ENST00000435781 UBR3Q6ZT12 1888 aa27.83■■■□□ 2.05
GTF3A-203ENST00000435781 PDGFDQ9GZP0 370 aaPredicted RBP27.83■■■□□ 2.05
GTF3A-203ENST00000435781 CEMIPQ8WUJ3 1361 aa27.83■■■□□ 2.05
GTF3A-203ENST00000435781 CICQ96RK0 1608 aaPredicted RBP27.81■■■□□ 2.04
GTF3A-203ENST00000435781 HMGB2P26583 209 aaKnown RBP27.81■■■□□ 2.04
GTF3A-203ENST00000435781 TJP1Q07157 1748 aa27.81■■■□□ 2.04
GTF3A-203ENST00000435781 ANP32CO43423 234 aa27.8■■■□□ 2.04
GTF3A-203ENST00000435781 ATP6V1AP38606 617 aa27.8■■■□□ 2.04
GTF3A-203ENST00000435781 ITPK1Q13572 414 aa27.8■■■□□ 2.04
GTF3A-203ENST00000435781 WDR43Q15061 677 aaKnown RBP eCLIP27.8■■■□□ 2.04
GTF3A-203ENST00000435781 SLC4A9Q96Q91 983 aa27.8■■■□□ 2.04
GTF3A-203ENST00000435781 RBM42Q9BTD8 480 aaKnown RBP27.8■■■□□ 2.04
GTF3A-203ENST00000435781 MAPK8IP3Q9UPT6 1336 aa27.8■■■□□ 2.04
GTF3A-203ENST00000435781 TEFQ10587 303 aa27.79■■■□□ 2.04
GTF3A-203ENST00000435781 TFCP2L1Q9NZI6 479 aa27.79■■■□□ 2.04
GTF3A-203ENST00000435781 PTCD1O75127 700 aaKnown RBP27.78■■■□□ 2.04
GTF3A-203ENST00000435781 LINC00116Q8NCU8 138 aa27.78■■■□□ 2.04
GTF3A-203ENST00000435781 MYH14Q7Z406 1995 aaKnown RBP27.78■■■□□ 2.04
GTF3A-203ENST00000435781 KCPQ6ZWJ8 1503 aa27.77■■■□□ 2.04
GTF3A-203ENST00000435781 PNPLA7Q6ZV29 1317 aa27.77■■■□□ 2.04
GTF3A-203ENST00000435781 HTATSF1O43719 755 aaKnown RBP27.77■■■□□ 2.04
GTF3A-203ENST00000435781 NFE2L2Q16236 605 aa27.77■■■□□ 2.04
GTF3A-203ENST00000435781 RTF1Q92541 710 aaKnown RBP27.77■■■□□ 2.04
GTF3A-203ENST00000435781 SLC39A6Q13433 755 aa27.76■■■□□ 2.03
GTF3A-203ENST00000435781 MCM10Q7L590 875 aa27.76■■■□□ 2.03
GTF3A-203ENST00000435781 ADAMTS8Q9UP79 889 aa27.75■■■□□ 2.03
GTF3A-203ENST00000435781 DCTN1Q14203 1278 aa27.74■■■□□ 2.03
GTF3A-203ENST00000435781 CCDC184Q52MB2 194 aa27.74■■■□□ 2.03
GTF3A-203ENST00000435781 CCDC146Q8IYE0 955 aa27.73■■■□□ 2.03
GTF3A-203ENST00000435781 AK7Q96M32 723 aa27.73■■■□□ 2.03
GTF3A-203ENST00000435781 ZBTB7AO95365 584 aa27.72■■■□□ 2.03
GTF3A-203ENST00000435781 SPON1Q9HCB6 807 aa27.72■■■□□ 2.03
GTF3A-203ENST00000435781 COL24A1Q17RW2 1714 aa27.71■■■□□ 2.03
GTF3A-203ENST00000435781 AMIGO3Q86WK7 504 aa27.69■■■□□ 2.02
GTF3A-203ENST00000435781 RUNDC1Q96C34 613 aa27.69■■■□□ 2.02
GTF3A-203ENST00000435781 ZNF790Q6PG37 636 aa27.68■■■□□ 2.02
GTF3A-203ENST00000435781 COL23A1Q86Y22 540 aaPredicted RBP27.68■■■□□ 2.02
GTF3A-203ENST00000435781 TTC5Q8N0Z6 440 aa27.68■■■□□ 2.02
GTF3A-203ENST00000435781 MTFR1LQ9H019 292 aa27.68■■■□□ 2.02
GTF3A-203ENST00000435781 CNTNAP4Q9C0A0 1308 aa27.67■■■□□ 2.02
GTF3A-203ENST00000435781 BTBD11A6QL63 1104 aa27.67■■■□□ 2.02
GTF3A-203ENST00000435781 TMPOP42166 694 aaKnown RBP27.67■■■□□ 2.02
GTF3A-203ENST00000435781 ATF5Q9Y2D1 282 aaPredicted RBP27.67■■■□□ 2.02
GTF3A-203ENST00000435781 KDM3BQ7LBC6 1761 aa27.67■■■□□ 2.02
GTF3A-203ENST00000435781 GNPATO15228 680 aa27.66■■■□□ 2.02
GTF3A-203ENST00000435781 RC3H1Q5TC82 1133 aaKnown RBP27.66■■■□□ 2.02
GTF3A-203ENST00000435781 FLAD1Q8NFF5 587 aa27.66■■■□□ 2.02
GTF3A-203ENST00000435781 SLC16A10Q8TF71 515 aa27.66■■■□□ 2.02
GTF3A-203ENST00000435781 RIPK4P57078 832 aa27.65■■■□□ 2.02
GTF3A-203ENST00000435781 SMIM5Q71RC9 77 aa27.65■■■□□ 2.02
GTF3A-203ENST00000435781 DNAJC10Q8IXB1 793 aa27.65■■■□□ 2.02
GTF3A-203ENST00000435781 MRS2Q9HD23 443 aa27.65■■■□□ 2.02
GTF3A-203ENST00000435781 MSH5O43196 834 aa27.64■■■□□ 2.02
GTF3A-203ENST00000435781 SSFA2P28290 1259 aa27.64■■■□□ 2.02
GTF3A-203ENST00000435781 VSIG10Q8N0Z9 540 aa27.64■■■□□ 2.02
GTF3A-203ENST00000435781 ZNF496Q96IT1 587 aaPredicted RBP27.64■■■□□ 2.02
GTF3A-203ENST00000435781 THUMPD2Q9BTF0 503 aaKnown RBP27.64■■■□□ 2.02
GTF3A-203ENST00000435781 RRP7AQ9Y3A4 280 aaKnown RBP27.64■■■□□ 2.02
GTF3A-203ENST00000435781 C4AP0C0L4 1744 aa27.64■■■□□ 2.01
GTF3A-203ENST00000435781 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.63■■■□□ 2.01
GTF3A-203ENST00000435781 KCNQ3O43525 872 aa27.63■■■□□ 2.01
GTF3A-203ENST00000435781 PHF14O94880 888 aa27.63■■■□□ 2.01
GTF3A-203ENST00000435781 CRKLP46109 303 aaKnown RBP27.63■■■□□ 2.01
GTF3A-203ENST00000435781 HEG1Q9ULI3 1381 aa27.62■■■□□ 2.01
GTF3A-203ENST00000435781 PTGER2P43116 358 aa27.62■■■□□ 2.01
GTF3A-203ENST00000435781 TAF7Q15545 349 aaPredicted RBP27.62■■■□□ 2.01
GTF3A-203ENST00000435781 LMOD3Q0VAK6 560 aa27.6■■■□□ 2.01
GTF3A-203ENST00000435781 PNISRQ8TF01 805 aaKnown RBP27.6■■■□□ 2.01
GTF3A-203ENST00000435781 FMNL2Q96PY5 1086 aa27.6■■■□□ 2.01
GTF3A-203ENST00000435781 SGIP1Q9BQI5 828 aa27.6■■■□□ 2.01
GTF3A-203ENST00000435781 RTCBQ9Y3I0 505 aaKnown RBP27.6■■■□□ 2.01
GTF3A-203ENST00000435781 RPS6KA4O75676 772 aa27.59■■■□□ 2.01
GTF3A-203ENST00000435781 CYP19A1P11511 503 aaPredicted RBP27.59■■■□□ 2.01
GTF3A-203ENST00000435781 NEUROD2Q15784 382 aa27.59■■■□□ 2.01
GTF3A-203ENST00000435781 INTS5Q6P9B9 1019 aaKnown RBP27.57■■■□□ 2
GTF3A-203ENST00000435781 CCDC87Q9NVE4 849 aa27.57■■■□□ 2
GTF3A-203ENST00000435781 MIS18AQ9NYP9 233 aa27.57■■■□□ 2
GTF3A-203ENST00000435781 PPP1R1BQ9UD71 204 aaPredicted RBP27.56■■■□□ 2
GTF3A-203ENST00000435781 LAMB4A4D0S4 1761 aa27.55■■■□□ 2
GTF3A-203ENST00000435781 APAF1O14727 1248 aa27.55■■■□□ 2
GTF3A-203ENST00000435781 ADRA2BP18089 450 aa27.55■■■□□ 2
GTF3A-203ENST00000435781 TRIM35Q9UPQ4 493 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms