RNA–Protein interactions for RNA: ENST00000435643.1

AC007879.1-201, humanhuman

TSL 4 BASIC

Gene AC007879.1, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007879.1-201ENST00000435643 PHLPP1O60346 1717 aa11.18□□□□□ -0.62
AC007879.1-201ENST00000435643 ATAD2Q6PL18 1390 aa11.18□□□□□ -0.62
AC007879.1-201ENST00000435643 SWT1Q5T5J6 900 aaKnown RBP11.18□□□□□ -0.62
AC007879.1-201ENST00000435643 SLC12A5Q9H2X9 1139 aa11.18□□□□□ -0.62
AC007879.1-201ENST00000435643 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.18□□□□□ -0.62
AC007879.1-201ENST00000435643 ACEP12821 1306 aa11.17□□□□□ -0.62
AC007879.1-201ENST00000435643 SOS2Q07890 1332 aaPredicted RBP11.17□□□□□ -0.62
AC007879.1-201ENST00000435643 NRG2O14511 850 aaPredicted RBP11.17□□□□□ -0.62
AC007879.1-201ENST00000435643 XPCQ01831 940 aaPredicted RBP11.17□□□□□ -0.62
AC007879.1-201ENST00000435643 CDCA8Q53HL2 280 aa11.17□□□□□ -0.62
AC007879.1-201ENST00000435643 AMER1Q5JTC6 1135 aaPredicted RBP11.17□□□□□ -0.62
AC007879.1-201ENST00000435643 KRT28Q7Z3Y7 464 aa11.17□□□□□ -0.62
AC007879.1-201ENST00000435643 SLF2Q8IX21 1173 aa11.17□□□□□ -0.62
AC007879.1-201ENST00000435643 NGDNQ8NEJ9 315 aaKnown RBP11.17□□□□□ -0.62
AC007879.1-201ENST00000435643 POLR3AO14802 1390 aaPredicted RBP11.16□□□□□ -0.62
AC007879.1-201ENST00000435643 NPHP3Q7Z494 1330 aa11.16□□□□□ -0.62
AC007879.1-201ENST00000435643 PSME1Q06323 249 aa11.16□□□□□ -0.62
AC007879.1-201ENST00000435643 TRAF7Q6Q0C0 670 aa11.16□□□□□ -0.62
AC007879.1-201ENST00000435643 TMC1Q8TDI8 760 aa11.16□□□□□ -0.62
AC007879.1-201ENST00000435643 COL16A1Q07092 1604 aaPredicted RBP11.16□□□□□ -0.62
AC007879.1-201ENST00000435643 AKAP12Q02952 1782 aa11.16□□□□□ -0.62
AC007879.1-201ENST00000435643 PXDNQ92626 1479 aa11.15□□□□□ -0.62
AC007879.1-201ENST00000435643 NKX2-3Q8TAU0 364 aa11.15□□□□□ -0.62
AC007879.1-201ENST00000435643 CD163L1Q9NR16 1453 aa11.14□□□□□ -0.63
AC007879.1-201ENST00000435643 EYA1Q99502 592 aa11.14□□□□□ -0.63
AC007879.1-201ENST00000435643 POLR3GLQ9BT43 218 aa11.14□□□□□ -0.63
AC007879.1-201ENST00000435643 CPSF1Q10570 1443 aaKnown RBP11.14□□□□□ -0.63
AC007879.1-201ENST00000435643 TRPM3Q9HCF6 1732 aaPredicted RBP11.14□□□□□ -0.63
AC007879.1-201ENST00000435643 MYOM1P52179 1685 aa11.14□□□□□ -0.63
AC007879.1-201ENST00000435643 KIF7Q2M1P5 1343 aa11.13□□□□□ -0.63
AC007879.1-201ENST00000435643 LRRC59Q96AG4 307 aaKnown RBP11.13□□□□□ -0.63
AC007879.1-201ENST00000435643 SPATA31A3Q5VYP0 1347 aa11.12□□□□□ -0.63
AC007879.1-201ENST00000435643 WASHC2AQ641Q2 1341 aa11.12□□□□□ -0.63
AC007879.1-201ENST00000435643 COPS2P61201 443 aa11.12□□□□□ -0.63
AC007879.1-201ENST00000435643 SBNO1A3KN83 1393 aa11.12□□□□□ -0.63
AC007879.1-201ENST00000435643 CCDC7Q96M83 1385 aa11.12□□□□□ -0.63
AC007879.1-201ENST00000435643 NINLQ9Y2I6 1382 aa11.12□□□□□ -0.63
AC007879.1-201ENST00000435643 MON2Q7Z3U7 1717 aa11.12□□□□□ -0.63
AC007879.1-201ENST00000435643 USP6P35125 1406 aa11.11□□□□□ -0.63
AC007879.1-201ENST00000435643 SSH2Q76I76 1423 aa11.11□□□□□ -0.63
AC007879.1-201ENST00000435643 ALS2Q96Q42 1657 aa11.11□□□□□ -0.63
AC007879.1-201ENST00000435643 HDGFL2Q7Z4V5 671 aaPredicted RBP11.1□□□□□ -0.63
AC007879.1-201ENST00000435643 CARD14Q9BXL6 1004 aa11.1□□□□□ -0.63
AC007879.1-201ENST00000435643 TERF2IPQ9NYB0 399 aa11.1□□□□□ -0.63
AC007879.1-201ENST00000435643 A0A1W2PP64 1363 aa11.1□□□□□ -0.63
AC007879.1-201ENST00000435643 KTN1Q86UP2 1357 aaKnown RBP11.1□□□□□ -0.63
AC007879.1-201ENST00000435643 TTC21BQ7Z4L5 1316 aa11.09□□□□□ -0.63
AC007879.1-201ENST00000435643 SHPRHQ149N8 1683 aa11.09□□□□□ -0.63
AC007879.1-201ENST00000435643 BRD4O60885 1362 aaPredicted RBP11.09□□□□□ -0.63
AC007879.1-201ENST00000435643 PNPLA6Q8IY17 1366 aa11.09□□□□□ -0.63
AC007879.1-201ENST00000435643 ANKRD36BQ8N2N9 1353 aa11.09□□□□□ -0.63
AC007879.1-201ENST00000435643 JCADQ9P266 1359 aa11.09□□□□□ -0.63
AC007879.1-201ENST00000435643 GGCXP38435 758 aa11.09□□□□□ -0.63
AC007879.1-201ENST00000435643 SLC4A3P48751 1232 aa11.09□□□□□ -0.63
AC007879.1-201ENST00000435643 TNS3Q68CZ2 1445 aa11.09□□□□□ -0.63
AC007879.1-201ENST00000435643 NRKQ7Z2Y5 1582 aa11.08□□□□□ -0.64
AC007879.1-201ENST00000435643 ZPR1O75312 459 aa11.08□□□□□ -0.64
AC007879.1-201ENST00000435643 LMOD2Q6P5Q4 547 aa11.08□□□□□ -0.64
AC007879.1-201ENST00000435643 TMUB1Q9BVT8 246 aa11.08□□□□□ -0.64
AC007879.1-201ENST00000435643 PRR14Q9BWN1 585 aa11.08□□□□□ -0.64
AC007879.1-201ENST00000435643 RTN4Q9NQC3 1192 aaKnown RBP11.08□□□□□ -0.64
AC007879.1-201ENST00000435643 COL22A1Q8NFW1 1626 aaPredicted RBP11.07□□□□□ -0.64
AC007879.1-201ENST00000435643 MLLT3P42568 568 aaPredicted RBP11.07□□□□□ -0.64
AC007879.1-201ENST00000435643 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.07□□□□□ -0.64
AC007879.1-201ENST00000435643 PANK3Q9H999 370 aa11.07□□□□□ -0.64
AC007879.1-201ENST00000435643 NUTM2GQ5VZR2 741 aa11.06□□□□□ -0.64
AC007879.1-201ENST00000435643 ABTB2Q8N961 1025 aa11.06□□□□□ -0.64
AC007879.1-201ENST00000435643 ARHGEF1Q92888 912 aaKnown RBP11.06□□□□□ -0.64
AC007879.1-201ENST00000435643 EDC4Q6P2E9 1401 aaKnown RBP11.06□□□□□ -0.64
AC007879.1-201ENST00000435643 TTC21AQ8NDW8 1320 aa11.06□□□□□ -0.64
AC007879.1-201ENST00000435643 ARHGEF10O15013 1369 aa11.05□□□□□ -0.64
AC007879.1-201ENST00000435643 PIK3C2AO00443 1686 aa11.05□□□□□ -0.64
AC007879.1-201ENST00000435643 PTGDRQ13258 359 aa11.05□□□□□ -0.64
AC007879.1-201ENST00000435643 NME9Q86XW9 330 aa11.05□□□□□ -0.64
AC007879.1-201ENST00000435643 CABLES1Q8TDN4 633 aa11.05□□□□□ -0.64
AC007879.1-201ENST00000435643 PDZRN3Q9UPQ7 1066 aa11.05□□□□□ -0.64
AC007879.1-201ENST00000435643 MARF1Q9Y4F3 1742 aaKnown RBP11.05□□□□□ -0.64
AC007879.1-201ENST00000435643 CRYBG1Q9Y4K1 1723 aa11.05□□□□□ -0.64
AC007879.1-201ENST00000435643 MED1Q15648 1581 aaPredicted RBP11.04□□□□□ -0.64
AC007879.1-201ENST00000435643 NSD3Q9BZ95 1437 aa11.04□□□□□ -0.64
AC007879.1-201ENST00000435643 NUTM2BA6NNL0 878 aaPredicted RBP11.04□□□□□ -0.64
AC007879.1-201ENST00000435643 NUTM2EB1AL46 878 aaPredicted RBP11.04□□□□□ -0.64
AC007879.1-201ENST00000435643 NLRP13Q86W25 1043 aa11.04□□□□□ -0.64
AC007879.1-201ENST00000435643 NUTM2AQ8IVF1 878 aaPredicted RBP11.04□□□□□ -0.64
AC007879.1-201ENST00000435643 PCDHB3Q9Y5E6 796 aa11.04□□□□□ -0.64
AC007879.1-201ENST00000435643 SPATA31A6Q5VVP1 1343 aa11.04□□□□□ -0.64
AC007879.1-201ENST00000435643 ABCA3Q99758 1704 aa11.04□□□□□ -0.64
AC007879.1-201ENST00000435643 FYB1O15117 783 aa11.03□□□□□ -0.64
AC007879.1-201ENST00000435643 PER1O15534 1290 aaPredicted RBP11.03□□□□□ -0.64
AC007879.1-201ENST00000435643 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
AC007879.1-201ENST00000435643 KIF20BQ96Q89 1820 aa11.02□□□□□ -0.64
AC007879.1-201ENST00000435643 LRP6O75581 1613 aa11.02□□□□□ -0.64
AC007879.1-201ENST00000435643 USP54Q70EL1 1684 aa11.02□□□□□ -0.64
AC007879.1-201ENST00000435643 DNAJB2P25686 324 aa11.02□□□□□ -0.65
AC007879.1-201ENST00000435643 BLOC1S3Q6QNY0 202 aa11.02□□□□□ -0.65
AC007879.1-201ENST00000435643 KCNV2Q8TDN2 545 aa11.02□□□□□ -0.65
AC007879.1-201ENST00000435643 GGNBP2Q9H3C7 697 aa11.02□□□□□ -0.65
AC007879.1-201ENST00000435643 USP19O94966 1318 aa11.02□□□□□ -0.65
AC007879.1-201ENST00000435643 PHRF1Q9P1Y6 1649 aaKnown RBP11.02□□□□□ -0.65
AC007879.1-201ENST00000435643 TMEM134Q9H6X4 195 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms