RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 EIF4A1P60842 406 aaKnown RBP16.39■□□□□ 0.21
SCRN1-207ENST00000434476 HDGFL1Q5TGJ6 251 aa16.38■□□□□ 0.21
SCRN1-207ENST00000434476 ZNF530Q6P9A1 599 aaPredicted RBP16.38■□□□□ 0.21
SCRN1-207ENST00000434476 ANKRD24Q8TF21 1146 aa16.38■□□□□ 0.21
SCRN1-207ENST00000434476 CACNA1FO60840 1977 aa16.38■□□□□ 0.21
SCRN1-207ENST00000434476 ZBTB7CA1YPR0 619 aa16.37■□□□□ 0.21
SCRN1-207ENST00000434476 ATP8B2P98198 1209 aa16.37■□□□□ 0.21
SCRN1-207ENST00000434476 TEFQ10587 303 aa16.37■□□□□ 0.21
SCRN1-207ENST00000434476 HSCBQ8IWL3 235 aa16.37■□□□□ 0.21
SCRN1-207ENST00000434476 LGR6Q9HBX8 967 aa16.37■□□□□ 0.21
SCRN1-207ENST00000434476 TRPM3Q9HCF6 1732 aaPredicted RBP16.37■□□□□ 0.21
SCRN1-207ENST00000434476 FAM208AQ9UK61 1670 aaKnown RBP16.36■□□□□ 0.21
SCRN1-207ENST00000434476 GSPT1P15170 499 aaKnown RBP16.36■□□□□ 0.21
SCRN1-207ENST00000434476 LRRC59Q96AG4 307 aaKnown RBP16.36■□□□□ 0.21
SCRN1-207ENST00000434476 OSBPL3Q9H4L5 887 aa16.36■□□□□ 0.21
SCRN1-207ENST00000434476 DCCP43146 1447 aa16.36■□□□□ 0.21
SCRN1-207ENST00000434476 LMO7Q8WWI1 1683 aa16.36■□□□□ 0.21
SCRN1-207ENST00000434476 LMTK3Q96Q04 1460 aa16.36■□□□□ 0.21
SCRN1-207ENST00000434476 RNMTO43148 476 aaKnown RBP16.35■□□□□ 0.21
SCRN1-207ENST00000434476 ATF3P18847 181 aa16.35■□□□□ 0.21
SCRN1-207ENST00000434476 C1orf141Q5JVX7 400 aa16.35■□□□□ 0.21
SCRN1-207ENST00000434476 LMOD2Q6P5Q4 547 aa16.35■□□□□ 0.21
SCRN1-207ENST00000434476 C16orf71Q8IYS4 520 aaPredicted RBP16.35■□□□□ 0.21
SCRN1-207ENST00000434476 BTBD11A6QL63 1104 aa16.35■□□□□ 0.21
SCRN1-207ENST00000434476 FRAT2O75474 233 aaPredicted RBP16.35■□□□□ 0.21
SCRN1-207ENST00000434476 XPCQ01831 940 aaPredicted RBP16.35■□□□□ 0.21
SCRN1-207ENST00000434476 CASC1Q6TDU7 716 aa16.34■□□□□ 0.21
SCRN1-207ENST00000434476 NECTIN2Q92692 538 aa16.34■□□□□ 0.21
SCRN1-207ENST00000434476 SLKQ9H2G2 1235 aaPredicted RBP16.34■□□□□ 0.21
SCRN1-207ENST00000434476 USP44Q9H0E7 712 aa16.33■□□□□ 0.2
SCRN1-207ENST00000434476 CHMP5Q9NZZ3 219 aa16.33■□□□□ 0.2
SCRN1-207ENST00000434476 CAMTA1Q9Y6Y1 1673 aa16.32■□□□□ 0.2
SCRN1-207ENST00000434476 GSE1Q14687 1217 aa16.32■□□□□ 0.2
SCRN1-207ENST00000434476 KIF2CQ99661 725 aa16.32■□□□□ 0.2
SCRN1-207ENST00000434476 PLEKHG2Q9H7P9 1386 aa16.32■□□□□ 0.2
SCRN1-207ENST00000434476 SMARCA5O60264 1052 aaPredicted RBP16.31■□□□□ 0.2
SCRN1-207ENST00000434476 UBTFL1P0CB47 393 aaPredicted RBP16.31■□□□□ 0.2
SCRN1-207ENST00000434476 SDSP20132 328 aa16.31■□□□□ 0.2
SCRN1-207ENST00000434476 MPRIPQ6WCQ1 1025 aa16.31■□□□□ 0.2
SCRN1-207ENST00000434476 KDM3BQ7LBC6 1761 aa16.31■□□□□ 0.2
SCRN1-207ENST00000434476 N4BP2Q86UW6 1770 aaPredicted RBP16.31■□□□□ 0.2
SCRN1-207ENST00000434476 SRCIN1Q9C0H9 1055 aa16.31■□□□□ 0.2
SCRN1-207ENST00000434476 AXIN2Q9Y2T1 843 aa16.31■□□□□ 0.2
SCRN1-207ENST00000434476 TMEM94Q12767 1356 aa16.3■□□□□ 0.2
SCRN1-207ENST00000434476 HEG1Q9ULI3 1381 aa16.3■□□□□ 0.2
SCRN1-207ENST00000434476 CADPS2Q86UW7 1296 aa16.3■□□□□ 0.2
SCRN1-207ENST00000434476 OTUD7AQ8TE49 926 aaPredicted RBP16.3■□□□□ 0.2
SCRN1-207ENST00000434476 LRRCC1Q9C099 1032 aa16.3■□□□□ 0.2
SCRN1-207ENST00000434476 PHAXQ9H814 394 aaKnown RBP16.3■□□□□ 0.2
SCRN1-207ENST00000434476 ERBB3P21860 1342 aa16.29■□□□□ 0.2
SCRN1-207ENST00000434476 EIF2S2P20042 333 aaKnown RBP16.29■□□□□ 0.2
SCRN1-207ENST00000434476 PDE1AP54750 535 aa16.29■□□□□ 0.2
SCRN1-207ENST00000434476 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.29■□□□□ 0.21e-10■□□□□ 10.4
SCRN1-207ENST00000434476 DBF4Q9UBU7 674 aaPredicted RBP16.29■□□□□ 0.2
SCRN1-207ENST00000434476 ALS2Q96Q42 1657 aa16.29■□□□□ 0.2
SCRN1-207ENST00000434476 IBTKQ9P2D0 1353 aaPredicted RBP16.29■□□□□ 0.2
SCRN1-207ENST00000434476 RGPD2P0DJD1 1756 aa16.29■□□□□ 0.2
SCRN1-207ENST00000434476 RAB11FIP3O75154 756 aa16.29■□□□□ 0.2
SCRN1-207ENST00000434476 SSH3Q8TE77 659 aa16.29■□□□□ 0.2
SCRN1-207ENST00000434476 DNAAF4Q8WXU2 420 aa16.29■□□□□ 0.2
SCRN1-207ENST00000434476 CHPF2Q9P2E5 772 aa16.29■□□□□ 0.2
SCRN1-207ENST00000434476 LRRFIP2Q9Y608 721 aaKnown RBP16.29■□□□□ 0.2
SCRN1-207ENST00000434476 NPHP3Q7Z494 1330 aa16.28■□□□□ 0.2
SCRN1-207ENST00000434476 SALL3Q9BXA9 1300 aa16.28■□□□□ 0.2
SCRN1-207ENST00000434476 PNMA6EA0A0J9YXQ4 647 aa16.28■□□□□ 0.2
SCRN1-207ENST00000434476 APBB1O00213 710 aa16.28■□□□□ 0.2
SCRN1-207ENST00000434476 KCNQ3O43525 872 aa16.28■□□□□ 0.2
SCRN1-207ENST00000434476 GIGYF1O75420 1035 aaPredicted RBP16.28■□□□□ 0.2
SCRN1-207ENST00000434476 BEND3Q5T5X7 828 aa16.28■□□□□ 0.2
SCRN1-207ENST00000434476 USP26Q9BXU7 913 aa16.28■□□□□ 0.2
SCRN1-207ENST00000434476 STAP2Q9UGK3 403 aa16.28■□□□□ 0.2
SCRN1-207ENST00000434476 CIZ1Q9ULV3 898 aaPredicted RBP16.28■□□□□ 0.2
SCRN1-207ENST00000434476 HDAC5Q9UQL6 1122 aa16.28■□□□□ 0.2
SCRN1-207ENST00000434476 REC8O95072 547 aa16.27■□□□□ 0.19
SCRN1-207ENST00000434476 POLA2Q14181 598 aa16.27■□□□□ 0.19
SCRN1-207ENST00000434476 RABEP1Q15276 862 aa16.27■□□□□ 0.19
SCRN1-207ENST00000434476 EXOC6BQ9Y2D4 811 aa16.27■□□□□ 0.19
SCRN1-207ENST00000434476 ABCC6O95255 1503 aa16.27■□□□□ 0.19
SCRN1-207ENST00000434476 AOX1Q06278 1338 aa16.26■□□□□ 0.19
SCRN1-207ENST00000434476 DDIT3P35638 169 aa16.26■□□□□ 0.19
SCRN1-207ENST00000434476 ZC3H6P61129 1189 aaKnown RBP16.26■□□□□ 0.19
SCRN1-207ENST00000434476 RAPGEF4Q8WZA2 1011 aa16.26■□□□□ 0.19
SCRN1-207ENST00000434476 SPG7Q9UQ90 795 aa16.26■□□□□ 0.19
SCRN1-207ENST00000434476 PXDNQ92626 1479 aa16.26■□□□□ 0.19
SCRN1-207ENST00000434476 PI4KAP2A4QPH2 592 aa16.25■□□□□ 0.19
SCRN1-207ENST00000434476 ALDH1L1O75891 902 aa16.25■□□□□ 0.19
SCRN1-207ENST00000434476 HSP90AB1P08238 724 aaKnown RBP16.25■□□□□ 0.19
SCRN1-207ENST00000434476 TATP17735 454 aaPredicted RBP16.25■□□□□ 0.19
SCRN1-207ENST00000434476 PI4KAP1Q8N8J0 262 aa16.25■□□□□ 0.19
SCRN1-207ENST00000434476 HYPKQ9NX55 129 aa16.25■□□□□ 0.19
SCRN1-207ENST00000434476 ADAMTS7Q9UKP4 1686 aa16.25■□□□□ 0.19
SCRN1-207ENST00000434476 K7ELQ4 463 aaPredicted RBP16.24■□□□□ 0.19
SCRN1-207ENST00000434476 ERC2O15083 957 aa16.24■□□□□ 0.19
SCRN1-207ENST00000434476 MX1P20591 662 aa16.23■□□□□ 0.19
SCRN1-207ENST00000434476 HSP90AB4PQ58FF6 505 aa16.23■□□□□ 0.19
SCRN1-207ENST00000434476 KSR2Q6VAB6 950 aa16.23■□□□□ 0.19
SCRN1-207ENST00000434476 SPRYD3Q8NCJ5 442 aa16.23■□□□□ 0.19
SCRN1-207ENST00000434476 NLRP2Q9NX02 1062 aa16.23■□□□□ 0.19
SCRN1-207ENST00000434476 TNS3Q68CZ2 1445 aa16.23■□□□□ 0.19
SCRN1-207ENST00000434476 PLEKHG5O94827 1062 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms