RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SYT1P21579 422 aa13.85□□□□□ -0.19
HMGCS1-202ENST00000433297 CCDC186Q7Z3E2 898 aa13.85□□□□□ -0.19
HMGCS1-202ENST00000433297 VPS37CA5D8V6 355 aaPredicted RBP13.85□□□□□ -0.19
HMGCS1-202ENST00000433297 CPA1P15085 419 aa13.85□□□□□ -0.19
HMGCS1-202ENST00000433297 ZFYVE16Q7Z3T8 1539 aa13.84□□□□□ -0.19
HMGCS1-202ENST00000433297 LRRC7Q96NW7 1537 aa13.84□□□□□ -0.19
HMGCS1-202ENST00000433297 ANKRD7Q92527 254 aa13.84□□□□□ -0.19
HMGCS1-202ENST00000433297 LRRCC1Q9C099 1032 aa13.84□□□□□ -0.19
HMGCS1-202ENST00000433297 IL1RAPL2Q9NP60 686 aa13.84□□□□□ -0.19
HMGCS1-202ENST00000433297 MYO3AQ8NEV4 1616 aa13.84□□□□□ -0.19
HMGCS1-202ENST00000433297 FAM135BQ49AJ0 1406 aa13.84□□□□□ -0.19
HMGCS1-202ENST00000433297 ATP10DQ9P241 1426 aa13.84□□□□□ -0.19
HMGCS1-202ENST00000433297 CDK11BP21127 795 aaKnown RBP13.84□□□□□ -0.19
HMGCS1-202ENST00000433297 GTF2E1P29083 439 aaPredicted RBP13.84□□□□□ -0.19
HMGCS1-202ENST00000433297 NCBP1Q09161 790 aaKnown RBP13.84□□□□□ -0.19
HMGCS1-202ENST00000433297 LUZP1Q86V48 1076 aa13.84□□□□□ -0.19
HMGCS1-202ENST00000433297 NECTIN2Q92692 538 aa13.84□□□□□ -0.19
HMGCS1-202ENST00000433297 OGFRQ9NZT2 677 aa13.84□□□□□ -0.19
HMGCS1-202ENST00000433297 MROH2AA6NES4 1674 aa13.84□□□□□ -0.19
HMGCS1-202ENST00000433297 NRXN1Q9ULB1 1477 aa13.83□□□□□ -0.19
HMGCS1-202ENST00000433297 TNNT1P13805 278 aa13.83□□□□□ -0.2
HMGCS1-202ENST00000433297 DDX54Q8TDD1 881 aaKnown RBP13.83□□□□□ -0.2
HMGCS1-202ENST00000433297 IL25Q9H293 177 aa13.83□□□□□ -0.2
HMGCS1-202ENST00000433297 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.83□□□□□ -0.2
HMGCS1-202ENST00000433297 NRBP1Q9UHY1 535 aa13.83□□□□□ -0.2
HMGCS1-202ENST00000433297 V9GYY5 206 aaPredicted RBP13.83□□□□□ -0.2
HMGCS1-202ENST00000433297 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.83□□□□□ -0.2
HMGCS1-202ENST00000433297 CCDC192P0DO97 292 aa13.83□□□□□ -0.2
HMGCS1-202ENST00000433297 CKAP2LQ8IYA6 745 aa13.83□□□□□ -0.2
HMGCS1-202ENST00000433297 G2E3Q7L622 706 aa13.83□□□□□ -0.2
HMGCS1-202ENST00000433297 FEZ1Q99689 392 aa13.83□□□□□ -0.2
HMGCS1-202ENST00000433297 PPRC1Q5VV67 1664 aaKnown RBP13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 PNPLA6Q8IY17 1366 aa13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 NPHP1O15259 732 aa13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 F13A1P00488 732 aa13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 ANAPC15P60006 121 aa13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 TPD52L1Q16890 204 aaPredicted RBP13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 NUTM1Q86Y26 1132 aa13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 TRIM5Q9C035 493 aa13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 ADGRB1O14514 1584 aa13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 ERICH4A6NGS2 130 aa13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 TPM3P06753 285 aa13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 IL13P35225 146 aa13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 NME9Q86XW9 330 aa13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 CCDC83Q8IWF9 413 aa13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 ATP6V1DQ9Y5K8 247 aa13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 RPGRIP1LQ68CZ1 1315 aa13.82□□□□□ -0.2
HMGCS1-202ENST00000433297 AK2P54819 239 aa13.81□□□□□ -0.2
HMGCS1-202ENST00000433297 FERMT3Q86UX7 667 aa13.81□□□□□ -0.2
HMGCS1-202ENST00000433297 CCDC112Q8NEF3 446 aa13.81□□□□□ -0.2
HMGCS1-202ENST00000433297 OSBPL3Q9H4L5 887 aa13.81□□□□□ -0.2
HMGCS1-202ENST00000433297 USP32Q8NFA0 1604 aa13.81□□□□□ -0.2
HMGCS1-202ENST00000433297 ATP7AQ04656 1500 aa13.81□□□□□ -0.2
HMGCS1-202ENST00000433297 KCNJ4P48050 445 aa13.81□□□□□ -0.2
HMGCS1-202ENST00000433297 AEBP1Q8IUX7 1158 aa13.81□□□□□ -0.2
HMGCS1-202ENST00000433297 SETBP1Q9Y6X0 1596 aa13.81□□□□□ -0.2
HMGCS1-202ENST00000433297 SOX12O15370 315 aa13.8□□□□□ -0.2
HMGCS1-202ENST00000433297 CTIFO43310 598 aaKnown RBP13.8□□□□□ -0.2
HMGCS1-202ENST00000433297 GNAI2P04899 355 aa13.8□□□□□ -0.2
HMGCS1-202ENST00000433297 FAM173BQ6P4H8 233 aa13.8□□□□□ -0.2
HMGCS1-202ENST00000433297 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.8□□□□□ -0.2
HMGCS1-202ENST00000433297 RPAP1Q9BWH6 1393 aaPredicted RBP13.8□□□□□ -0.2
HMGCS1-202ENST00000433297 KNDC1Q76NI1 1749 aa13.8□□□□□ -0.2
HMGCS1-202ENST00000433297 REREQ9P2R6 1566 aa13.8□□□□□ -0.2
HMGCS1-202ENST00000433297 PNMA6EA0A0J9YXQ4 647 aa13.8□□□□□ -0.2
HMGCS1-202ENST00000433297 PDE4CQ08493 712 aa13.8□□□□□ -0.2
HMGCS1-202ENST00000433297 SULT6B1Q6IMI4 303 aa13.8□□□□□ -0.2
HMGCS1-202ENST00000433297 RGS12O14924 1447 aa13.79□□□□□ -0.2
HMGCS1-202ENST00000433297 RIMS2Q9UQ26 1411 aa13.79□□□□□ -0.2
HMGCS1-202ENST00000433297 GOLGA6L4A6NEF3 574 aa13.79□□□□□ -0.2
HMGCS1-202ENST00000433297 GJB2P29033 226 aa13.79□□□□□ -0.2
HMGCS1-202ENST00000433297 CTNNA3Q9UI47 895 aa13.79□□□□□ -0.2
HMGCS1-202ENST00000433297 HAP1P54257 671 aaPredicted RBP13.79□□□□□ -0.2
HMGCS1-202ENST00000433297 FUCA2Q9BTY2 467 aa13.79□□□□□ -0.2
HMGCS1-202ENST00000433297 TMEM51Q9NW97 253 aa13.79□□□□□ -0.2
HMGCS1-202ENST00000433297 SPG7Q9UQ90 795 aa13.79□□□□□ -0.2
HMGCS1-202ENST00000433297 ERCC6L2Q5T890 1561 aa13.79□□□□□ -0.2
HMGCS1-202ENST00000433297 KIF24Q5T7B8 1368 aa13.79□□□□□ -0.2
HMGCS1-202ENST00000433297 TMEM87AQ8NBN3 555 aa13.78□□□□□ -0.2
HMGCS1-202ENST00000433297 LIMCH1Q9UPQ0 1083 aa13.78□□□□□ -0.2
HMGCS1-202ENST00000433297 CASTP20810 708 aaKnown RBP13.78□□□□□ -0.2
HMGCS1-202ENST00000433297 CWC27Q6UX04 472 aaKnown RBP13.78□□□□□ -0.2
HMGCS1-202ENST00000433297 WAPLQ7Z5K2 1190 aa13.78□□□□□ -0.2
HMGCS1-202ENST00000433297 TRERF1Q96PN7 1200 aa13.78□□□□□ -0.2
HMGCS1-202ENST00000433297 FANCAO15360 1455 aa13.78□□□□□ -0.2
HMGCS1-202ENST00000433297 TCHHQ07283 1943 aa13.78□□□□□ -0.2
HMGCS1-202ENST00000433297 NPATQ14207 1427 aa13.78□□□□□ -0.2
HMGCS1-202ENST00000433297 LARGE1O95461 756 aa13.78□□□□□ -0.2
HMGCS1-202ENST00000433297 RUFY3Q7L099 469 aa13.78□□□□□ -0.2
HMGCS1-202ENST00000433297 RASEFQ8IZ41 740 aa13.78□□□□□ -0.2
HMGCS1-202ENST00000433297 ARHGEF40Q8TER5 1519 aa13.78□□□□□ -0.2
HMGCS1-202ENST00000433297 HSPA4P34932 840 aa13.77□□□□□ -0.2
HMGCS1-202ENST00000433297 IDI1Q13907 227 aa13.77□□□□□ -0.2
HMGCS1-202ENST00000433297 FAM200AQ8TCP9 573 aa13.77□□□□□ -0.2
HMGCS1-202ENST00000433297 SMTNL1A8MU46 457 aa13.77□□□□□ -0.21
HMGCS1-202ENST00000433297 MAP3K11Q16584 847 aa13.77□□□□□ -0.21
HMGCS1-202ENST00000433297 ANO6Q4KMQ2 910 aa13.77□□□□□ -0.21
HMGCS1-202ENST00000433297 RTF1Q92541 710 aaKnown RBP13.77□□□□□ -0.21
HMGCS1-202ENST00000433297 NUP62CLQ9H1M0 184 aa13.77□□□□□ -0.21
HMGCS1-202ENST00000433297 SNX14Q9Y5W7 946 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms