RNA–Protein interactions for RNA: ENST00000432983.5

BBS9-206, Transcript of Bardet-Biedl syndrome 9, human

TSL 4

Gene BBS9, Length 613 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS9-206	ENST00000432983	SIK1	P57059	783 aa		33.25	■■■□□ 2.91
BBS9-206	ENST00000432983	RSPH6A	Q9H0K4	717 aa		33.25	■■■□□ 2.91
BBS9-206	ENST00000432983	CABP4	P57796	275 aa		33.24	■■■□□ 2.91
BBS9-206	ENST00000432983	LGR6	Q9HBX8	967 aa		33.24	■■■□□ 2.91
BBS9-206	ENST00000432983	NUDC	Q9Y266	331 aa		33.24	■■■□□ 2.91
BBS9-206	ENST00000432983	NFATC2IP	Q8NCF5	419 aa		33.22	■■■□□ 2.91
BBS9-206	ENST00000432983	TFCP2L1	Q9NZI6	479 aa		33.22	■■■□□ 2.91
BBS9-206	ENST00000432983	ATF5	Q9Y2D1	282 aa	Predicted RBP	33.22	■■■□□ 2.91
BBS9-206	ENST00000432983	COL5A3	P25940	1745 aa	Predicted RBP	33.22	■■■□□ 2.91
BBS9-206	ENST00000432983	RNMT	O43148	476 aa	Known RBP	33.21	■■■□□ 2.91
BBS9-206	ENST00000432983	MTFR1L	Q9H019	292 aa		33.21	■■■□□ 2.91
BBS9-206	ENST00000432983	ITPK1	Q13572	414 aa		33.2	■■■□□ 2.91
BBS9-206	ENST00000432983	RALBP1	Q15311	655 aa		33.2	■■■□□ 2.91
BBS9-206	ENST00000432983	PHACTR3	Q96KR7	559 aa		33.2	■■■□□ 2.91
BBS9-206	ENST00000432983	SLC4A9	Q96Q91	983 aa		33.2	■■■□□ 2.91
BBS9-206	ENST00000432983	PRKAR2B	P31323	418 aa		33.19	■■■□□ 2.9
BBS9-206	ENST00000432983	SGIP1	Q9BQI5	828 aa		33.19	■■■□□ 2.9
BBS9-206	ENST00000432983	SIPA1L3	O60292	1781 aa	Predicted RBP	33.19	■■■□□ 2.9
BBS9-206	ENST00000432983	U2AF1L5	P0DN76	240 aa	Predicted RBP	33.18	■■■□□ 2.9
BBS9-206	ENST00000432983	U2AF1	Q01081	240 aa	Known RBP eCLIP	33.18	■■■□□ 2.9
BBS9-206	ENST00000432983	LINC00116	Q8NCU8	138 aa		33.18	■■■□□ 2.9
BBS9-206	ENST00000432983	CIC	Q96RK0	1608 aa	Predicted RBP	33.17	■■■□□ 2.9
BBS9-206	ENST00000432983	HMGB2	P26583	209 aa	Known RBP	33.17	■■■□□ 2.9
BBS9-206	ENST00000432983	SLC52A2	Q9HAB3	445 aa		33.17	■■■□□ 2.9
BBS9-206	ENST00000432983	GAS2L2	Q8NHY3	880 aa		33.16	■■■□□ 2.9
BBS9-206	ENST00000432983	FCHSD2	O94868	740 aa		33.15	■■■□□ 2.9
BBS9-206	ENST00000432983	ATP6V1A	P38606	617 aa		33.15	■■■□□ 2.9
BBS9-206	ENST00000432983	COL23A1	Q86Y22	540 aa	Predicted RBP	33.15	■■■□□ 2.9
BBS9-206	ENST00000432983	SLC16A10	Q8TF71	515 aa		33.15	■■■□□ 2.9
BBS9-206	ENST00000432983	MAP3K5	Q99683	1374 aa		33.15	■■■□□ 2.9
BBS9-206	ENST00000432983	MYH14	Q7Z406	1995 aa	Known RBP	33.14	■■■□□ 2.9
BBS9-206	ENST00000432983	TJP1	Q07157	1748 aa		33.14	■■■□□ 2.9
BBS9-206	ENST00000432983	AMIGO3	Q86WK7	504 aa		33.14	■■■□□ 2.9
BBS9-206	ENST00000432983	UBR2	Q8IWV8	1755 aa		33.12	■■■□□ 2.89
BBS9-206	ENST00000432983	CHD4	Q14839	1912 aa		33.12	■■■□□ 2.89
BBS9-206	ENST00000432983	IL17RE	Q8NFR9	667 aa		33.11	■■■□□ 2.89
BBS9-206	ENST00000432983	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33.11	■■■□□ 2.89
BBS9-206	ENST00000432983	DLG5	Q8TDM6	1919 aa		33.1	■■■□□ 2.89
BBS9-206	ENST00000432983	GNAT3	A8MTJ3	354 aa		33.1	■■■□□ 2.89
BBS9-206	ENST00000432983	SYT17	Q9BSW7	474 aa		33.1	■■■□□ 2.89
BBS9-206	ENST00000432983	RBM42	Q9BTD8	480 aa	Known RBP	33.1	■■■□□ 2.89
BBS9-206	ENST00000432983	AK7	Q96M32	723 aa		33.09	■■■□□ 2.89
BBS9-206	ENST00000432983	KCP	Q6ZWJ8	1503 aa		33.07	■■■□□ 2.89
BBS9-206	ENST00000432983	MYBBP1A	Q9BQG0	1328 aa	Known RBP	33.07	■■■□□ 2.88
BBS9-206	ENST00000432983	CEMIP	Q8WUJ3	1361 aa		33.07	■■■□□ 2.88
BBS9-206	ENST00000432983	PTCD1	O75127	700 aa	Known RBP	33.06	■■■□□ 2.88
BBS9-206	ENST00000432983	SMIM5	Q71RC9	77 aa		33.06	■■■□□ 2.88
BBS9-206	ENST00000432983	FLAD1	Q8NFF5	587 aa		33.05	■■■□□ 2.88
BBS9-206	ENST00000432983	SLC39A6	Q13433	755 aa		33.04	■■■□□ 2.88
BBS9-206	ENST00000432983	ARX	Q96QS3	562 aa		33.04	■■■□□ 2.88
BBS9-206	ENST00000432983	PLEKHF1	Q96S99	279 aa		33.03	■■■□□ 2.88
BBS9-206	ENST00000432983	SSFA2	P28290	1259 aa		33.02	■■■□□ 2.88
BBS9-206	ENST00000432983	RC3H1	Q5TC82	1133 aa	Known RBP	33.02	■■■□□ 2.88
BBS9-206	ENST00000432983	PRKRIP1	Q9H875	184 aa	Predicted RBP	33.02	■■■□□ 2.88
BBS9-206	ENST00000432983	CNTNAP4	Q9C0A0	1308 aa		33.02	■■■□□ 2.88
BBS9-206	ENST00000432983	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	33.01	■■■□□ 2.87
BBS9-206	ENST00000432983	GNPAT	O15228	680 aa		33	■■■□□ 2.87
BBS9-206	ENST00000432983	MSH5	O43196	834 aa		33	■■■□□ 2.87
BBS9-206	ENST00000432983	PHF14	O94880	888 aa		32.98	■■■□□ 2.87
BBS9-206	ENST00000432983	C4A	P0C0L4	1744 aa		32.97	■■■□□ 2.87
BBS9-206	ENST00000432983	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.97	■■■□□ 2.87
BBS9-206	ENST00000432983	TEF	Q10587	303 aa		32.96	■■■□□ 2.87
BBS9-206	ENST00000432983	MSL1	Q68DK7	614 aa		32.94	■■■□□ 2.86
BBS9-206	ENST00000432983	HTATSF1	O43719	755 aa	Known RBP	32.93	■■■□□ 2.86
BBS9-206	ENST00000432983	CRKL	P46109	303 aa	Known RBP	32.93	■■■□□ 2.86
BBS9-206	ENST00000432983	DNAJC10	Q8IXB1	793 aa		32.93	■■■□□ 2.86
BBS9-206	ENST00000432983	RPS6KA4	O75676	772 aa		32.92	■■■□□ 2.86
BBS9-206	ENST00000432983	POLD1	P28340	1107 aa		32.92	■■■□□ 2.86
BBS9-206	ENST00000432983	MCM10	Q7L590	875 aa		32.92	■■■□□ 2.86
BBS9-206	ENST00000432983	RTCB	Q9Y3I0	505 aa	Known RBP	32.92	■■■□□ 2.86
BBS9-206	ENST00000432983	UTRN	P46939	3433 aa		32.92	■■■□□ 2.86
BBS9-206	ENST00000432983	ZNF790	Q6PG37	636 aa		32.91	■■■□□ 2.86
BBS9-206	ENST00000432983	DCTN1	Q14203	1278 aa		32.9	■■■□□ 2.86
BBS9-206	ENST00000432983	INTS5	Q6P9B9	1019 aa	Known RBP	32.9	■■■□□ 2.86
BBS9-206	ENST00000432983	VSIG10	Q8N0Z9	540 aa		32.9	■■■□□ 2.86
BBS9-206	ENST00000432983	RTF1	Q92541	710 aa	Known RBP	32.89	■■■□□ 2.86
BBS9-206	ENST00000432983	CYP19A1	P11511	503 aa	Predicted RBP	32.88	■■■□□ 2.85
BBS9-206	ENST00000432983	ADRA2B	P18089	450 aa		32.88	■■■□□ 2.85
BBS9-206	ENST00000432983	NFE2L2	Q16236	605 aa		32.88	■■■□□ 2.85
BBS9-206	ENST00000432983	ZNF496	Q96IT1	587 aa	Predicted RBP	32.88	■■■□□ 2.85
BBS9-206	ENST00000432983	TRAPPC3L	Q5T215	181 aa		32.87	■■■□□ 2.85
BBS9-206	ENST00000432983	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.87	■■■□□ 2.85
BBS9-206	ENST00000432983	ARHGEF1	Q92888	912 aa	Known RBP	32.87	■■■□□ 2.85
BBS9-206	ENST00000432983	PNN	Q9H307	717 aa	Known RBP	32.87	■■■□□ 2.85
BBS9-206	ENST00000432983	NEFM	P07197	916 aa		32.86	■■■□□ 2.85
BBS9-206	ENST00000432983	TTC5	Q8N0Z6	440 aa		32.86	■■■□□ 2.85
BBS9-206	ENST00000432983	KCNQ3	O43525	872 aa		32.85	■■■□□ 2.85
BBS9-206	ENST00000432983	HEG1	Q9ULI3	1381 aa		32.84	■■■□□ 2.85
BBS9-206	ENST00000432983	BTBD11	A6QL63	1104 aa		32.84	■■■□□ 2.85
BBS9-206	ENST00000432983	CCDC87	Q9NVE4	849 aa		32.84	■■■□□ 2.85
BBS9-206	ENST00000432983	KDM3B	Q7LBC6	1761 aa		32.83	■■■□□ 2.85
BBS9-206	ENST00000432983	MAPK8IP3	Q9UPT6	1336 aa		32.82	■■■□□ 2.84
BBS9-206	ENST00000432983	SOS1	Q07889	1333 aa	Predicted RBP	32.79	■■■□□ 2.84
BBS9-206	ENST00000432983	FMNL2	Q96PY5	1086 aa		32.79	■■■□□ 2.84
BBS9-206	ENST00000432983	GYS1	P13807	737 aa		32.78	■■■□□ 2.84
BBS9-206	ENST00000432983	GPR162	Q16538	588 aa		32.78	■■■□□ 2.84
BBS9-206	ENST00000432983	ZBTB1	Q9Y2K1	713 aa		32.78	■■■□□ 2.84
BBS9-206	ENST00000432983	RFC4	P35249	363 aa		32.77	■■■□□ 2.84
BBS9-206	ENST00000432983	TAF7	Q15545	349 aa	Predicted RBP	32.77	■■■□□ 2.84
BBS9-206	ENST00000432983	ADAMTS8	Q9UP79	889 aa		32.77	■■■□□ 2.84

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms