RNA–Protein interactions for RNA: ENST00000430029.1

PTCD1-203, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-203ENST00000430029 SBF2Q86WG5 1849 aa25.37■■□□□ 1.65
PTCD1-203ENST00000430029 IL16Q14005 1332 aa25.37■■□□□ 1.65
PTCD1-203ENST00000430029 KCNQ2O43526 872 aa25.36■■□□□ 1.65
PTCD1-203ENST00000430029 CALD1Q05682 793 aaKnown RBP25.36■■□□□ 1.65
PTCD1-203ENST00000430029 GOLGA2Q08379 1002 aa25.36■■□□□ 1.65
PTCD1-203ENST00000430029 TAF7Q15545 349 aaPredicted RBP25.36■■□□□ 1.65
PTCD1-203ENST00000430029 FAM196AQ6ZSG2 479 aa25.36■■□□□ 1.65
PTCD1-203ENST00000430029 PTF1AQ7RTS3 328 aa25.35■■□□□ 1.65
PTCD1-203ENST00000430029 PIGBQ92521 554 aa25.35■■□□□ 1.65
PTCD1-203ENST00000430029 MIS18AQ9NYP9 233 aa25.35■■□□□ 1.65
PTCD1-203ENST00000430029 SYTL4Q96C24 671 aaPredicted RBP25.34■■□□□ 1.65
PTCD1-203ENST00000430029 CFAP44Q96MT7 982 aa25.34■■□□□ 1.65
PTCD1-203ENST00000430029 IFT57Q9NWB7 429 aa25.34■■□□□ 1.65
PTCD1-203ENST00000430029 TMOD3Q9NYL9 352 aa25.34■■□□□ 1.65
PTCD1-203ENST00000430029 LAS1LQ9Y4W2 734 aaKnown RBP25.34■■□□□ 1.65
PTCD1-203ENST00000430029 NHSQ6T4R5 1651 aa25.33■■□□□ 1.65
PTCD1-203ENST00000430029 CHL1O00533 1208 aa25.33■■□□□ 1.65
PTCD1-203ENST00000430029 SLFN5Q08AF3 891 aa25.32■■□□□ 1.64
PTCD1-203ENST00000430029 BTBD11A6QL63 1104 aa25.31■■□□□ 1.64
PTCD1-203ENST00000430029 KCNQ3O43525 872 aa25.31■■□□□ 1.64
PTCD1-203ENST00000430029 GNAI1P63096 354 aa25.31■■□□□ 1.64
PTCD1-203ENST00000430029 MBIPQ9NS73 344 aa25.31■■□□□ 1.64
PTCD1-203ENST00000430029 SLC39A6Q13433 755 aa25.3■■□□□ 1.64
PTCD1-203ENST00000430029 TRMT2AQ8IZ69 625 aaKnown RBP25.3■■□□□ 1.64
PTCD1-203ENST00000430029 UPF1Q92900 1129 aaKnown RBP eCLIP25.3■■□□□ 1.64
PTCD1-203ENST00000430029 TSR2Q969E8 191 aaKnown RBP25.3■■□□□ 1.64
PTCD1-203ENST00000430029 TSPYL4Q9UJ04 414 aa25.3■■□□□ 1.64
PTCD1-203ENST00000430029 KDM3BQ7LBC6 1761 aa25.29■■□□□ 1.64
PTCD1-203ENST00000430029 E9PSI1 815 aa25.29■■□□□ 1.64
PTCD1-203ENST00000430029 BABAM1Q9NWV8 329 aa25.29■■□□□ 1.64
PTCD1-203ENST00000430029 PAPPAQ13219 1627 aa25.29■■□□□ 1.64
PTCD1-203ENST00000430029 FANCIQ9NVI1 1328 aa25.28■■□□□ 1.64
PTCD1-203ENST00000430029 TRIM37O94972 964 aa25.27■■□□□ 1.64
PTCD1-203ENST00000430029 ATG3Q9NT62 314 aa25.27■■□□□ 1.64
PTCD1-203ENST00000430029 ASAP1Q9ULH1 1129 aa25.27■■□□□ 1.64
PTCD1-203ENST00000430029 BTAF1O14981 1849 aa25.26■■□□□ 1.63
PTCD1-203ENST00000430029 DUSP27Q5VZP5 1158 aa25.26■■□□□ 1.63
PTCD1-203ENST00000430029 ZNF790Q6PG37 636 aa25.26■■□□□ 1.63
PTCD1-203ENST00000430029 BCL11BQ9C0K0 894 aaPredicted RBP25.26■■□□□ 1.63
PTCD1-203ENST00000430029 MYH16Q9H6N6 1097 aa25.26■■□□□ 1.63
PTCD1-203ENST00000430029 KCPQ6ZWJ8 1503 aa25.22■■□□□ 1.63
PTCD1-203ENST00000430029 EIF4A1P60842 406 aaKnown RBP25.22■■□□□ 1.63
PTCD1-203ENST00000430029 KRT24Q2M2I5 525 aa25.22■■□□□ 1.63
PTCD1-203ENST00000430029 UBR2Q8IWV8 1755 aa25.22■■□□□ 1.63
PTCD1-203ENST00000430029 TTC5Q8N0Z6 440 aa25.2■■□□□ 1.62
PTCD1-203ENST00000430029 ZNF496Q96IT1 587 aaPredicted RBP25.2■■□□□ 1.62
PTCD1-203ENST00000430029 EXOSC9Q06265 439 aaKnown RBP25.19■■□□□ 1.62
PTCD1-203ENST00000430029 PALLDQ8WX93 1383 aa25.18■■□□□ 1.62
PTCD1-203ENST00000430029 HEG1Q9ULI3 1381 aa25.18■■□□□ 1.62
PTCD1-203ENST00000430029 TNS1Q9HBL0 1735 aaKnown RBP25.18■■□□□ 1.62
PTCD1-203ENST00000430029 C8orf58Q8NAV2 365 aa25.18■■□□□ 1.62
PTCD1-203ENST00000430029 EP400Q96L91 3159 aa25.18■■□□□ 1.62
PTCD1-203ENST00000430029 PTCD1O75127 700 aaKnown RBP25.17■■□□□ 1.62
PTCD1-203ENST00000430029 SMARCC1Q92922 1105 aaPredicted RBP25.17■■□□□ 1.62
PTCD1-203ENST00000430029 TSPYL6Q8N831 410 aa25.16■■□□□ 1.62
PTCD1-203ENST00000430029 FMNL2Q96PY5 1086 aa25.16■■□□□ 1.62
PTCD1-203ENST00000430029 SLC4A9Q96Q91 983 aa25.16■■□□□ 1.62
PTCD1-203ENST00000430029 RBM42Q9BTD8 480 aaKnown RBP25.15■■□□□ 1.62
PTCD1-203ENST00000430029 PRAMEF22A3QJZ6 481 aa25.14■■□□□ 1.62
PTCD1-203ENST00000430029 ELL2O00472 640 aaPredicted RBP25.14■■□□□ 1.62
PTCD1-203ENST00000430029 LY75O60449 1722 aa25.13■■□□□ 1.61
PTCD1-203ENST00000430029 GIGYF1O75420 1035 aaPredicted RBP25.13■■□□□ 1.61
PTCD1-203ENST00000430029 APBA3O96018 575 aa25.13■■□□□ 1.61
PTCD1-203ENST00000430029 LOC102724428A0A0B4J2F2 783 aa25.12■■□□□ 1.61
PTCD1-203ENST00000430029 SIK1P57059 783 aa25.12■■□□□ 1.61
PTCD1-203ENST00000430029 C5P01031 1676 aa25.12■■□□□ 1.61
PTCD1-203ENST00000430029 TWISTNBQ3B726 338 aaPredicted RBP25.11■■□□□ 1.61
PTCD1-203ENST00000430029 VAMP4O75379 141 aa25.1■■□□□ 1.61
PTCD1-203ENST00000430029 SNRPA1P09661 255 aaKnown RBP25.1■■□□□ 1.61
PTCD1-203ENST00000430029 VSIG10Q8N0Z9 540 aa25.1■■□□□ 1.61
PTCD1-203ENST00000430029 TJP1Q07157 1748 aa25.09■■□□□ 1.61
PTCD1-203ENST00000430029 PLSCR1O15162 318 aa25.09■■□□□ 1.61
PTCD1-203ENST00000430029 DNAJC10Q8IXB1 793 aa25.09■■□□□ 1.61
PTCD1-203ENST00000430029 USP16Q9Y5T5 823 aa25.09■■□□□ 1.61
PTCD1-203ENST00000430029 KCNQ4P56696 695 aa25.08■■□□□ 1.61
PTCD1-203ENST00000430029 ITPK1Q13572 414 aa25.08■■□□□ 1.61
PTCD1-203ENST00000430029 HOXB7P09629 217 aa25.07■■□□□ 1.6
PTCD1-203ENST00000430029 ATP6V1AP38606 617 aa25.07■■□□□ 1.6
PTCD1-203ENST00000430029 PROM2Q8N271 834 aa25.07■■□□□ 1.6
PTCD1-203ENST00000430029 ZNF831Q5JPB2 1677 aa25.07■■□□□ 1.6
PTCD1-203ENST00000430029 CICQ96RK0 1608 aaPredicted RBP25.06■■□□□ 1.6
PTCD1-203ENST00000430029 LRRC4BQ9NT99 713 aa25.05■■□□□ 1.6
PTCD1-203ENST00000430029 CCNL1Q9UK58 526 aaPredicted RBP25.05■■□□□ 1.6
PTCD1-203ENST00000430029 SOS1Q07889 1333 aaPredicted RBP25.05■■□□□ 1.6
PTCD1-203ENST00000430029 LAMB4A4D0S4 1761 aa25.05■■□□□ 1.6
PTCD1-203ENST00000430029 RGPD3A6NKT7 1758 aaPredicted RBP25.03■■□□□ 1.6
PTCD1-203ENST00000430029 RGPD4Q7Z3J3 1758 aa25.03■■□□□ 1.6
PTCD1-203ENST00000430029 CT47B1P0C2W7 299 aaPredicted RBP25.03■■□□□ 1.6
PTCD1-203ENST00000430029 EIF2S2P20042 333 aaKnown RBP25.03■■□□□ 1.6
PTCD1-203ENST00000430029 EN1Q05925 392 aaPredicted RBP25.03■■□□□ 1.6
PTCD1-203ENST00000430029 SF3B2Q13435 895 aaKnown RBP25.03■■□□□ 1.6
PTCD1-203ENST00000430029 TXNRD1Q16881 649 aa25.03■■□□□ 1.6
PTCD1-203ENST00000430029 CCDC125Q86Z20 511 aa25.03■■□□□ 1.6
PTCD1-203ENST00000430029 NECTIN2Q92692 538 aa25.03■■□□□ 1.6
PTCD1-203ENST00000430029 CAMKK2Q96RR4 588 aa25.03■■□□□ 1.6
PTCD1-203ENST00000430029 CYP19A1P11511 503 aaPredicted RBP25.02■■□□□ 1.6
PTCD1-203ENST00000430029 HDGFL1Q5TGJ6 251 aa25.02■■□□□ 1.6
PTCD1-203ENST00000430029 DEFB132Q7Z7B7 95 aa25.02■■□□□ 1.6
PTCD1-203ENST00000430029 LINC00116Q8NCU8 138 aa25.02■■□□□ 1.6
PTCD1-203ENST00000430029 TEX13AQ9BXU3 409 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms