RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 GNAT3A8MTJ3 354 aa11.1□□□□□ -0.63
NUP98-207ENST00000429801 NGLY1Q96IV0 654 aa11.1□□□□□ -0.63
NUP98-207ENST00000429801 SPG7Q9UQ90 795 aa11.1□□□□□ -0.63
NUP98-207ENST00000429801 SLIT2O94813 1529 aa11.09□□□□□ -0.63
NUP98-207ENST00000429801 C8orf37Q96NL8 207 aa11.09□□□□□ -0.63
NUP98-207ENST00000429801 MYH16Q9H6N6 1097 aa11.09□□□□□ -0.63
NUP98-207ENST00000429801 DLG5Q8TDM6 1919 aa11.09□□□□□ -0.63
NUP98-207ENST00000429801 NWD2Q9ULI1 1742 aa11.09□□□□□ -0.63
NUP98-207ENST00000429801 IL2RBP14784 551 aa11.09□□□□□ -0.63
NUP98-207ENST00000429801 C1orf141Q5JVX7 400 aa11.09□□□□□ -0.63
NUP98-207ENST00000429801 MEX3CQ5U5Q3 659 aaKnown RBP11.09□□□□□ -0.63
NUP98-207ENST00000429801 TRMT2AQ8IZ69 625 aaKnown RBP11.09□□□□□ -0.63
NUP98-207ENST00000429801 PDCL3Q9H2J4 239 aa11.09□□□□□ -0.63
NUP98-207ENST00000429801 PRDM10Q9NQV6 1147 aa11.09□□□□□ -0.63
NUP98-207ENST00000429801 MAP3K5Q99683 1374 aa11.09□□□□□ -0.63
NUP98-207ENST00000429801 AKAP4Q5JQC9 854 aa11.08□□□□□ -0.64
NUP98-207ENST00000429801 DUSP27Q5VZP5 1158 aa11.08□□□□□ -0.64
NUP98-207ENST00000429801 ZNF530Q6P9A1 599 aaPredicted RBP11.08□□□□□ -0.64
NUP98-207ENST00000429801 SPINK5Q9NQ38 1064 aaPredicted RBP11.08□□□□□ -0.64
NUP98-207ENST00000429801 MEGF6O75095 1541 aa11.08□□□□□ -0.64
NUP98-207ENST00000429801 LRP6O75581 1613 aa11.08□□□□□ -0.64
NUP98-207ENST00000429801 UNC5CLQ8IV45 518 aa11.08□□□□□ -0.64
NUP98-207ENST00000429801 OVOS2A0A0G2JMS6 1433 aa11.07□□□□□ -0.64
NUP98-207ENST00000429801 NRAPQ86VF7 1730 aa11.07□□□□□ -0.64
NUP98-207ENST00000429801 FNBP4Q8N3X1 1017 aaPredicted RBP11.07□□□□□ -0.64
NUP98-207ENST00000429801 PARP4Q9UKK3 1724 aaKnown RBP11.07□□□□□ -0.64
NUP98-207ENST00000429801 GNAI1P63096 354 aa11.07□□□□□ -0.64
NUP98-207ENST00000429801 DCTN1Q14203 1278 aa11.07□□□□□ -0.64
NUP98-207ENST00000429801 MCM10Q7L590 875 aa11.07□□□□□ -0.64
NUP98-207ENST00000429801 THRAP3Q9Y2W1 955 aaKnown RBP11.07□□□□□ -0.64
NUP98-207ENST00000429801 DDRGK1Q96HY6 314 aa11.06□□□□□ -0.64
NUP98-207ENST00000429801 THUMPD2Q9BTF0 503 aaKnown RBP11.06□□□□□ -0.64
NUP98-207ENST00000429801 IFT57Q9NWB7 429 aa11.06□□□□□ -0.64
NUP98-207ENST00000429801 B4GALNT3Q6L9W6 998 aa11.06□□□□□ -0.64
NUP98-207ENST00000429801 ZCRB1Q8TBF4 217 aaKnown RBP11.06□□□□□ -0.64
NUP98-207ENST00000429801 FBXO41Q8TF61 875 aa11.06□□□□□ -0.64
NUP98-207ENST00000429801 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
NUP98-207ENST00000429801 CDCA7Q9BWT1 371 aaPredicted RBP11.06□□□□□ -0.64
NUP98-207ENST00000429801 SPATA31A1Q5TZJ5 1347 aa11.05□□□□□ -0.64
NUP98-207ENST00000429801 IFNL2Q8IZJ0 200 aa11.05□□□□□ -0.64
NUP98-207ENST00000429801 SPATA31A5Q5VU36 1347 aa11.05□□□□□ -0.64
NUP98-207ENST00000429801 SPATA31A7Q8IWB4 1347 aa11.05□□□□□ -0.64
NUP98-207ENST00000429801 PPP4R3CPQ6ZMV5 832 aa11.05□□□□□ -0.64
NUP98-207ENST00000429801 USP21Q9UK80 565 aa11.05□□□□□ -0.64
NUP98-207ENST00000429801 CCDC9Q9Y3X0 531 aaKnown RBP11.05□□□□□ -0.64
NUP98-207ENST00000429801 PKD1L3Q7Z443 1732 aa11.05□□□□□ -0.64
NUP98-207ENST00000429801 BCL9LQ86UU0 1499 aa11.05□□□□□ -0.64
NUP98-207ENST00000429801 PCDH11XQ9BZA7 1347 aa11.04□□□□□ -0.64
NUP98-207ENST00000429801 PCDH11YQ9BZA8 1340 aa11.04□□□□□ -0.64
NUP98-207ENST00000429801 HSP90AB1P08238 724 aaKnown RBP11.04□□□□□ -0.64
NUP98-207ENST00000429801 PHKG2P15735 406 aa11.04□□□□□ -0.64
NUP98-207ENST00000429801 VPS72Q15906 364 aa11.04□□□□□ -0.64
NUP98-207ENST00000429801 IL17REQ8NFR9 667 aa11.04□□□□□ -0.64
NUP98-207ENST00000429801 ZNF853P0CG23 659 aa11.04□□□□□ -0.64
NUP98-207ENST00000429801 CEMIPQ8WUJ3 1361 aa11.04□□□□□ -0.64
NUP98-207ENST00000429801 TSR2Q969E8 191 aaKnown RBP11.03□□□□□ -0.64
NUP98-207ENST00000429801 DISP2A7MBM2 1401 aa11.03□□□□□ -0.64
NUP98-207ENST00000429801 MPRIPQ6WCQ1 1025 aa11.03□□□□□ -0.64
NUP98-207ENST00000429801 BARGINQ6ZT62 677 aa11.03□□□□□ -0.64
NUP98-207ENST00000429801 RGS22Q8NE09 1264 aa11.03□□□□□ -0.64
NUP98-207ENST00000429801 BABAM1Q9NWV8 329 aa11.03□□□□□ -0.64
NUP98-207ENST00000429801 CHL1O00533 1208 aa11.02□□□□□ -0.64
NUP98-207ENST00000429801 CYP27B1O15528 508 aa11.02□□□□□ -0.64
NUP98-207ENST00000429801 RNMTO43148 476 aaKnown RBP11.02□□□□□ -0.64
NUP98-207ENST00000429801 CT47B1P0C2W7 299 aaPredicted RBP11.02□□□□□ -0.64
NUP98-207ENST00000429801 DCAF5Q96JK2 942 aa11.02□□□□□ -0.64
NUP98-207ENST00000429801 MBIPQ9NS73 344 aa11.02□□□□□ -0.64
NUP98-207ENST00000429801 RCAN3Q9UKA8 241 aa11.02□□□□□ -0.64
NUP98-207ENST00000429801 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.02□□□□□ -0.65
NUP98-207ENST00000429801 AFF2P51816 1311 aa11.02□□□□□ -0.65
NUP98-207ENST00000429801 LRRC37A3O60309 1634 aa11.02□□□□□ -0.65
NUP98-207ENST00000429801 TEFQ10587 303 aa11.02□□□□□ -0.65
NUP98-207ENST00000429801 TAF7Q15545 349 aaPredicted RBP11.02□□□□□ -0.65
NUP98-207ENST00000429801 TMED8Q6PL24 325 aaPredicted RBP11.02□□□□□ -0.65
NUP98-207ENST00000429801 LGR6Q9HBX8 967 aa11.02□□□□□ -0.65
NUP98-207ENST00000429801 PPP4R2Q9NY27 417 aa11.02□□□□□ -0.65
NUP98-207ENST00000429801 EXOC5O00471 708 aa11.01□□□□□ -0.65
NUP98-207ENST00000429801 MAPK8IP2Q13387 824 aaPredicted RBP11.01□□□□□ -0.65
NUP98-207ENST00000429801 HSP90B1P14625 803 aaKnown RBP11.01□□□□□ -0.65
NUP98-207ENST00000429801 TSPYL4Q9UJ04 414 aa11.01□□□□□ -0.65
NUP98-207ENST00000429801 WNK3Q9BYP7 1800 aa11□□□□□ -0.65
NUP98-207ENST00000429801 CDK11BP21127 795 aaKnown RBP11□□□□□ -0.65
NUP98-207ENST00000429801 EXOSC9Q06265 439 aaKnown RBP11□□□□□ -0.65
NUP98-207ENST00000429801 DDX54Q8TDD1 881 aaKnown RBP11□□□□□ -0.65
NUP98-207ENST00000429801 NKX1-1Q15270 411 aaPredicted RBP11□□□□□ -0.65
NUP98-207ENST00000429801 TRPC5Q9UL62 973 aaPredicted RBP11□□□□□ -0.65
NUP98-207ENST00000429801 ADAMTS7Q9UKP4 1686 aa11□□□□□ -0.65
NUP98-207ENST00000429801 NFKBIBQ15653 356 aa10.99□□□□□ -0.65
NUP98-207ENST00000429801 DDB1Q16531 1140 aa10.99□□□□□ -0.65
NUP98-207ENST00000429801 KDM6AO15550 1401 aaPredicted RBP10.99□□□□□ -0.65
NUP98-207ENST00000429801 TNS2Q63HR2 1409 aa10.99□□□□□ -0.65
NUP98-207ENST00000429801 ZNF428Q96B54 188 aa10.98□□□□□ -0.65
NUP98-207ENST00000429801 SLC52A2Q9HAB3 445 aa10.98□□□□□ -0.65
NUP98-207ENST00000429801 MIS18AQ9NYP9 233 aa10.98□□□□□ -0.65
NUP98-207ENST00000429801 SCN11AQ9UI33 1791 aa10.98□□□□□ -0.65
NUP98-207ENST00000429801 BTBD11A6QL63 1104 aa10.98□□□□□ -0.65
NUP98-207ENST00000429801 ERVV-2B6SEH9 535 aa10.98□□□□□ -0.65
NUP98-207ENST00000429801 CLCN1P35523 988 aa10.98□□□□□ -0.65
NUP98-207ENST00000429801 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
NUP98-207ENST00000429801 GJD4Q96KN9 370 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms