RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 TRAK2O60296 914 aa22.91■■□□□ 1.26
PDE6B-202ENST00000429163 FSD2A1L4K1 749 aa22.91■■□□□ 1.26
PDE6B-202ENST00000429163 ATP8B2P98198 1209 aa22.91■■□□□ 1.26
PDE6B-202ENST00000429163 SRCIN1Q9C0H9 1055 aa22.91■■□□□ 1.26
PDE6B-202ENST00000429163 C16orf71Q8IYS4 520 aaPredicted RBP22.9■■□□□ 1.26
PDE6B-202ENST00000429163 OVOS2A0A0G2JMS6 1433 aa22.9■■□□□ 1.26
PDE6B-202ENST00000429163 EPB41L2O43491 1005 aaKnown RBP22.9■■□□□ 1.26
PDE6B-202ENST00000429163 HSP90AA1P07900 732 aaKnown RBP22.9■■□□□ 1.26
PDE6B-202ENST00000429163 SLC4A10Q6U841 1118 aa22.9■■□□□ 1.26
PDE6B-202ENST00000429163 AOX1Q06278 1338 aa22.89■■□□□ 1.26
PDE6B-202ENST00000429163 FKBP5Q13451 457 aaPredicted RBP22.89■■□□□ 1.25
PDE6B-202ENST00000429163 LMTK3Q96Q04 1460 aa22.89■■□□□ 1.25
PDE6B-202ENST00000429163 SALL3Q9BXA9 1300 aa22.89■■□□□ 1.25
PDE6B-202ENST00000429163 PDE1AP54750 535 aa22.88■■□□□ 1.25
PDE6B-202ENST00000429163 NCAPD2Q15021 1401 aa22.88■■□□□ 1.25
PDE6B-202ENST00000429163 TNPO1Q92973 898 aaKnown RBP22.88■■□□□ 1.25
PDE6B-202ENST00000429163 BRPF3Q9ULD4 1205 aa22.88■■□□□ 1.25
PDE6B-202ENST00000429163 IBTKQ9P2D0 1353 aaPredicted RBP22.87■■□□□ 1.25
PDE6B-202ENST00000429163 F6X3S4 739 aa22.87■■□□□ 1.25
PDE6B-202ENST00000429163 ERC2O15083 957 aa22.87■■□□□ 1.25
PDE6B-202ENST00000429163 LRRCC1Q9C099 1032 aa22.87■■□□□ 1.25
PDE6B-202ENST00000429163 ADAMTSL3P82987 1691 aa22.87■■□□□ 1.25
PDE6B-202ENST00000429163 GOLGA6L3A6NEY3 463 aa22.87■■□□□ 1.25
PDE6B-202ENST00000429163 LMO7Q8WWI1 1683 aa22.86■■□□□ 1.25
PDE6B-202ENST00000429163 CWC22Q9HCG8 908 aaKnown RBP22.86■■□□□ 1.25
PDE6B-202ENST00000429163 STAP2Q9UGK3 403 aa22.86■■□□□ 1.25
PDE6B-202ENST00000429163 SETD1BQ9UPS6 1966 aaKnown RBP22.86■■□□□ 1.25
PDE6B-202ENST00000429163 KDM3BQ7LBC6 1761 aa22.86■■□□□ 1.25
PDE6B-202ENST00000429163 TUBGCP6Q96RT7 1819 aa22.85■■□□□ 1.25
PDE6B-202ENST00000429163 ST18O60284 1047 aa22.85■■□□□ 1.25
PDE6B-202ENST00000429163 OTUD7AQ8TE49 926 aaPredicted RBP22.85■■□□□ 1.25
PDE6B-202ENST00000429163 CD2BP2O95400 341 aaKnown RBP22.84■■□□□ 1.25
PDE6B-202ENST00000429163 NUCB2P80303 420 aa22.84■■□□□ 1.25
PDE6B-202ENST00000429163 AMOTQ4VCS5 1084 aa22.84■■□□□ 1.25
PDE6B-202ENST00000429163 SLIT3O75094 1523 aa22.83■■□□□ 1.25
PDE6B-202ENST00000429163 SMARCA5O60264 1052 aaPredicted RBP22.83■■□□□ 1.25
PDE6B-202ENST00000429163 RAB11FIP3O75154 756 aa22.83■■□□□ 1.25
PDE6B-202ENST00000429163 GOLGA6L22H0YM25 854 aa22.82■■□□□ 1.24
PDE6B-202ENST00000429163 HDGFL1Q5TGJ6 251 aa22.82■■□□□ 1.24
PDE6B-202ENST00000429163 IL17RAQ96F46 866 aa22.82■■□□□ 1.24
PDE6B-202ENST00000429163 AKAP4Q5JQC9 854 aa22.82■■□□□ 1.24
PDE6B-202ENST00000429163 MCM2P49736 904 aa22.81■■□□□ 1.24
PDE6B-202ENST00000429163 MRE11P49959 708 aa22.81■■□□□ 1.24
PDE6B-202ENST00000429163 FAM43AQ8N2R8 423 aa22.81■■□□□ 1.24
PDE6B-202ENST00000429163 SSH3Q8TE77 659 aa22.81■■□□□ 1.24
PDE6B-202ENST00000429163 MST1RQ04912 1400 aa22.81■■□□□ 1.24
PDE6B-202ENST00000429163 UBTFL1P0CB47 393 aaPredicted RBP22.8■■□□□ 1.24
PDE6B-202ENST00000429163 MX1P20591 662 aa22.8■■□□□ 1.24
PDE6B-202ENST00000429163 ANAPC15P60006 121 aa22.8■■□□□ 1.24
PDE6B-202ENST00000429163 PSME1Q06323 249 aa22.8■■□□□ 1.24
PDE6B-202ENST00000429163 PLEKHO1Q53GL0 409 aaPredicted RBP22.8■■□□□ 1.24
PDE6B-202ENST00000429163 NUTM2GQ5VZR2 741 aa22.8■■□□□ 1.24
PDE6B-202ENST00000429163 RBM42Q9BTD8 480 aaKnown RBP22.8■■□□□ 1.24
PDE6B-202ENST00000429163 USP44Q9H0E7 712 aa22.8■■□□□ 1.24
PDE6B-202ENST00000429163 CAMTA1Q9Y6Y1 1673 aa22.79■■□□□ 1.24
PDE6B-202ENST00000429163 EIF4A1P60842 406 aaKnown RBP22.79■■□□□ 1.24
PDE6B-202ENST00000429163 NBPF6Q5VWK0 638 aa22.78■■□□□ 1.24
PDE6B-202ENST00000429163 NBPF4Q96M43 638 aa22.78■■□□□ 1.24
PDE6B-202ENST00000429163 HDAC5Q9UQL6 1122 aa22.78■■□□□ 1.24
PDE6B-202ENST00000429163 MCCP23508 829 aa22.77■■□□□ 1.24
PDE6B-202ENST00000429163 POLA2Q14181 598 aa22.77■■□□□ 1.24
PDE6B-202ENST00000429163 LTV1Q96GA3 475 aaPredicted RBP22.77■■□□□ 1.24
PDE6B-202ENST00000429163 PNMA6EA0A0J9YXQ4 647 aa22.76■■□□□ 1.23
PDE6B-202ENST00000429163 C14orf37Q86TY3 774 aa22.76■■□□□ 1.23
PDE6B-202ENST00000429163 EXOC6BQ9Y2D4 811 aa22.76■■□□□ 1.23
PDE6B-202ENST00000429163 LRRFIP2Q9Y608 721 aaKnown RBP22.76■■□□□ 1.23
PDE6B-202ENST00000429163 NPHP4O75161 1426 aaPredicted RBP22.76■■□□□ 1.23
PDE6B-202ENST00000429163 HSP90AB4PQ58FF6 505 aa22.76■■□□□ 1.23
PDE6B-202ENST00000429163 PLEKHG2Q9H7P9 1386 aa22.76■■□□□ 1.23
PDE6B-202ENST00000429163 APBB1O00213 710 aa22.75■■□□□ 1.23
PDE6B-202ENST00000429163 CYP2E1P05181 493 aaPredicted RBP22.75■■□□□ 1.23
PDE6B-202ENST00000429163 ESYT1Q9BSJ8 1104 aa22.75■■□□□ 1.23
PDE6B-202ENST00000429163 KDM4FA0A1W2PPD8 638 aa22.75■■□□□ 1.23
PDE6B-202ENST00000429163 ESCO1Q5FWF5 840 aa22.75■■□□□ 1.23
PDE6B-202ENST00000429163 ARHGEF25Q86VW2 580 aa22.75■■□□□ 1.23
PDE6B-202ENST00000429163 KIF1AQ12756 1690 aa22.74■■□□□ 1.23
PDE6B-202ENST00000429163 XRCC6P12956 609 aaKnown RBP eCLIP22.73■■□□□ 1.23
PDE6B-202ENST00000429163 TEFQ10587 303 aa22.73■■□□□ 1.23
PDE6B-202ENST00000429163 ADAMTS7Q9UKP4 1686 aa22.72■■□□□ 1.23
PDE6B-202ENST00000429163 HEG1Q9ULI3 1381 aa22.72■■□□□ 1.23
PDE6B-202ENST00000429163 DNAAF4Q8WXU2 420 aa22.72■■□□□ 1.23
PDE6B-202ENST00000429163 CHMLP26374 656 aa22.71■■□□□ 1.23
PDE6B-202ENST00000429163 TRPM3Q9HCF6 1732 aaPredicted RBP22.71■■□□□ 1.23
PDE6B-202ENST00000429163 BAG4O95429 457 aaKnown RBP22.7■■□□□ 1.23
PDE6B-202ENST00000429163 GCP02774 474 aa22.7■■□□□ 1.23
PDE6B-202ENST00000429163 MTX1Q13505 466 aa22.7■■□□□ 1.23
PDE6B-202ENST00000429163 KLHL40Q2TBA0 621 aa22.7■■□□□ 1.23
PDE6B-202ENST00000429163 BEND3Q5T5X7 828 aa22.7■■□□□ 1.23
PDE6B-202ENST00000429163 ZNF530Q6P9A1 599 aaPredicted RBP22.7■■□□□ 1.23
PDE6B-202ENST00000429163 USHBP1Q8N6Y0 703 aa22.7■■□□□ 1.23
PDE6B-202ENST00000429163 KIF1BPQ96EK5 621 aa22.7■■□□□ 1.23
PDE6B-202ENST00000429163 DBF4Q9UBU7 674 aaPredicted RBP22.7■■□□□ 1.23
PDE6B-202ENST00000429163 BTBD11A6QL63 1104 aa22.69■■□□□ 1.22
PDE6B-202ENST00000429163 ALDH1L1O75891 902 aa22.69■■□□□ 1.22
PDE6B-202ENST00000429163 C1orf141Q5JVX7 400 aa22.69■■□□□ 1.22
PDE6B-202ENST00000429163 PHAXQ9H814 394 aaKnown RBP22.69■■□□□ 1.22
PDE6B-202ENST00000429163 USP42Q9H9J4 1324 aaKnown RBP22.69■■□□□ 1.22
PDE6B-202ENST00000429163 ABCC6O95255 1503 aa22.69■■□□□ 1.22
PDE6B-202ENST00000429163 RNMTO43148 476 aaKnown RBP22.69■■□□□ 1.22
PDE6B-202ENST00000429163 SSFA2P28290 1259 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms