RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 KAT6BQ8WYB5 2073 aa18.2■□□□□ 0.5
SCAP-206ENST00000428413 STK11IPQ8N1F8 1099 aa18.2■□□□□ 0.5
SCAP-206ENST00000428413 THEMISQ8N1K5 641 aaPredicted RBP18.2■□□□□ 0.5
SCAP-206ENST00000428413 CASTP20810 708 aaKnown RBP18.2■□□□□ 0.5
SCAP-206ENST00000428413 NECAB1Q8N987 351 aa18.2■□□□□ 0.5
SCAP-206ENST00000428413 SYTL4Q96C24 671 aaPredicted RBP18.2■□□□□ 0.5
SCAP-206ENST00000428413 JAKMIP1Q96N16 626 aaKnown RBP18.19■□□□□ 0.5
SCAP-206ENST00000428413 ZNF830Q96NB3 372 aaPredicted RBP18.19■□□□□ 0.5
SCAP-206ENST00000428413 GORABQ5T7V8 394 aa18.19■□□□□ 0.5
SCAP-206ENST00000428413 RAPGEF4Q8WZA2 1011 aa18.19■□□□□ 0.5
SCAP-206ENST00000428413 SPHKAPQ2M3C7 1700 aa18.19■□□□□ 0.5
SCAP-206ENST00000428413 SETD1BQ9UPS6 1966 aaKnown RBP18.19■□□□□ 0.5
SCAP-206ENST00000428413 PRAMEF22A3QJZ6 481 aa18.19■□□□□ 0.5
SCAP-206ENST00000428413 PHF8Q9UPP1 1060 aa18.19■□□□□ 0.5
SCAP-206ENST00000428413 RBM25P49756 843 aaKnown RBP18.18■□□□□ 0.5
SCAP-206ENST00000428413 PROSER2Q86WR7 435 aaPredicted RBP18.18■□□□□ 0.5
SCAP-206ENST00000428413 SPC24Q8NBT2 197 aa18.18■□□□□ 0.5
SCAP-206ENST00000428413 RNF17Q9BXT8 1623 aaKnown RBP18.18■□□□□ 0.5
SCAP-206ENST00000428413 PRIM1P49642 420 aaKnown RBP18.18■□□□□ 0.5
SCAP-206ENST00000428413 IL17REQ8NFR9 667 aa18.18■□□□□ 0.5
SCAP-206ENST00000428413 ORAI2Q96SN7 254 aa18.18■□□□□ 0.5
SCAP-206ENST00000428413 UHRF1BP1LA0JNW5 1464 aa18.17■□□□□ 0.5
SCAP-206ENST00000428413 RAB3GAP1Q15042 981 aa18.17■□□□□ 0.5
SCAP-206ENST00000428413 CAMK4Q16566 473 aa18.17■□□□□ 0.5
SCAP-206ENST00000428413 MAP3K2Q9Y2U5 619 aa18.17■□□□□ 0.5
SCAP-206ENST00000428413 EFCAB6Q5THR3 1501 aa18.17■□□□□ 0.5
SCAP-206ENST00000428413 TTC5Q8N0Z6 440 aa18.16■□□□□ 0.5
SCAP-206ENST00000428413 DDX11Q96FC9 970 aa18.16■□□□□ 0.5
SCAP-206ENST00000428413 MYOM2P54296 1465 aa18.16■□□□□ 0.5
SCAP-206ENST00000428413 KIF1BO60333 1816 aa18.16■□□□□ 0.5
SCAP-206ENST00000428413 DNAJC5Q9H3Z4 198 aa18.16■□□□□ 0.5
SCAP-206ENST00000428413 FAM173BQ6P4H8 233 aa18.16■□□□□ 0.5
SCAP-206ENST00000428413 LRRC2Q9BYS8 371 aa18.16■□□□□ 0.5
SCAP-206ENST00000428413 CNTROBQ8N137 903 aa18.15■□□□□ 0.5
SCAP-206ENST00000428413 TNRQ92752 1358 aa18.15■□□□□ 0.5
SCAP-206ENST00000428413 STRN4Q9NRL3 753 aa18.15■□□□□ 0.5
SCAP-206ENST00000428413 CEP152O94986 1710 aa18.15■□□□□ 0.5
SCAP-206ENST00000428413 NEXNQ0ZGT2 675 aa18.15■□□□□ 0.5
SCAP-206ENST00000428413 ROBO2Q9HCK4 1378 aa18.15■□□□□ 0.5
SCAP-206ENST00000428413 DNAAF4Q8WXU2 420 aa18.15■□□□□ 0.5
SCAP-206ENST00000428413 GPATCH3Q96I76 525 aa18.15■□□□□ 0.5
SCAP-206ENST00000428413 PUS7Q96PZ0 661 aaKnown RBP18.15■□□□□ 0.5
SCAP-206ENST00000428413 NBPF6Q5VWK0 638 aa18.14■□□□□ 0.5
SCAP-206ENST00000428413 NBPF4Q96M43 638 aa18.14■□□□□ 0.5
SCAP-206ENST00000428413 TFIP11Q9UBB9 837 aaKnown RBP18.14■□□□□ 0.5
SCAP-206ENST00000428413 EDC3Q96F86 508 aaKnown RBP18.14■□□□□ 0.49
SCAP-206ENST00000428413 TULP4Q9NRJ4 1543 aa18.14■□□□□ 0.49
SCAP-206ENST00000428413 TET3O43151 1660 aa18.14■□□□□ 0.49
SCAP-206ENST00000428413 ZKSCAN1P17029 563 aaPredicted RBP18.14■□□□□ 0.49
SCAP-206ENST00000428413 RHPN1Q8TCX5 695 aa18.14■□□□□ 0.49
SCAP-206ENST00000428413 ABCC4O15439 1325 aa18.13■□□□□ 0.49
SCAP-206ENST00000428413 ESYT1Q9BSJ8 1104 aa18.13■□□□□ 0.49
SCAP-206ENST00000428413 ZSCAN23Q3MJ62 389 aa18.13■□□□□ 0.49
SCAP-206ENST00000428413 RAB11FIP4Q86YS3 637 aa18.13■□□□□ 0.49
SCAP-206ENST00000428413 HOXC9P31274 260 aa18.13■□□□□ 0.49
SCAP-206ENST00000428413 PLEKHO1Q53GL0 409 aaPredicted RBP18.13■□□□□ 0.49
SCAP-206ENST00000428413 CHMP4CQ96CF2 233 aa18.13■□□□□ 0.49
SCAP-206ENST00000428413 TSPOAP1O95153 1857 aa18.13■□□□□ 0.49
SCAP-206ENST00000428413 PDIA4P13667 645 aaKnown RBP18.12■□□□□ 0.49
SCAP-206ENST00000428413 PDCL3Q9H2J4 239 aa18.12■□□□□ 0.49
SCAP-206ENST00000428413 TAF7LQ5H9L4 462 aa18.12■□□□□ 0.49
SCAP-206ENST00000428413 CIZ1Q9ULV3 898 aaPredicted RBP18.12■□□□□ 0.49
SCAP-206ENST00000428413 ABCC3O15438 1527 aa18.12■□□□□ 0.49
SCAP-206ENST00000428413 PPRC1Q5VV67 1664 aaKnown RBP18.12■□□□□ 0.49
SCAP-206ENST00000428413 CLCN1P35523 988 aa18.11■□□□□ 0.49
SCAP-206ENST00000428413 SNX21Q969T3 373 aa18.11■□□□□ 0.49
SCAP-206ENST00000428413 KIF2CQ99661 725 aa18.11■□□□□ 0.49
SCAP-206ENST00000428413 MYD88Q99836 296 aa18.11■□□□□ 0.49
SCAP-206ENST00000428413 PTPRCP08575 1304 aa18.11■□□□□ 0.49
SCAP-206ENST00000428413 ZNF853P0CG23 659 aa18.11■□□□□ 0.49
SCAP-206ENST00000428413 NSFL1CQ9UNZ2 370 aaKnown RBP18.11■□□□□ 0.49
SCAP-206ENST00000428413 SHROOM2Q13796 1616 aa18.11■□□□□ 0.49
SCAP-206ENST00000428413 RTL1A6NKG5 1358 aa18.1■□□□□ 0.49
SCAP-206ENST00000428413 H3BQV1 296 aa18.1■□□□□ 0.49
SCAP-206ENST00000428413 IFFO2Q5TF58 517 aa18.1■□□□□ 0.49
SCAP-206ENST00000428413 USP44Q9H0E7 712 aa18.1■□□□□ 0.49
SCAP-206ENST00000428413 GUCY1B3Q02153 619 aa18.1■□□□□ 0.49
SCAP-206ENST00000428413 CNPY2Q9Y2B0 182 aa18.1■□□□□ 0.49
SCAP-206ENST00000428413 CHMLP26374 656 aa18.09■□□□□ 0.49
SCAP-206ENST00000428413 ATP8B2P98198 1209 aa18.09■□□□□ 0.49
SCAP-206ENST00000428413 BICD2Q8TD16 824 aa18.09■□□□□ 0.49
SCAP-206ENST00000428413 SYAP1Q96A49 352 aaPredicted RBP18.09■□□□□ 0.49
SCAP-206ENST00000428413 TOMM22Q9NS69 142 aa18.09■□□□□ 0.49
SCAP-206ENST00000428413 RBSNQ9H1K0 784 aa18.09■□□□□ 0.49
SCAP-206ENST00000428413 USP25Q9UHP3 1055 aa18.09■□□□□ 0.49
SCAP-206ENST00000428413 GADD45BO75293 160 aaPredicted RBP18.09■□□□□ 0.49
SCAP-206ENST00000428413 PROSER3Q2NL68 480 aa18.09■□□□□ 0.49
SCAP-206ENST00000428413 KIAA2012Q0VF49 1180 aa18.08■□□□□ 0.48
SCAP-206ENST00000428413 SNRKQ9NRH2 765 aa18.08■□□□□ 0.48
SCAP-206ENST00000428413 FAM184AQ8NB25 1140 aa18.08■□□□□ 0.48
SCAP-206ENST00000428413 KIF1BPQ96EK5 621 aa18.08■□□□□ 0.48
SCAP-206ENST00000428413 NFATC2IPQ8NCF5 419 aa18.07■□□□□ 0.48
SCAP-206ENST00000428413 EDC4Q6P2E9 1401 aaKnown RBP18.07■□□□□ 0.48
SCAP-206ENST00000428413 CKAP2LQ8IYA6 745 aa18.07■□□□□ 0.48
SCAP-206ENST00000428413 BBXQ8WY36 941 aaPredicted RBP18.07■□□□□ 0.48
SCAP-206ENST00000428413 GLI2P10070 1586 aa18.07■□□□□ 0.48
SCAP-206ENST00000428413 PTMSP20962 102 aa18.07■□□□□ 0.48
SCAP-206ENST00000428413 ZRSR1Q15695 479 aaKnown RBP18.07■□□□□ 0.48
SCAP-206ENST00000428413 GIMAP6Q6P9H5 292 aa18.07■□□□□ 0.48
SCAP-206ENST00000428413 UBE3BQ7Z3V4 1068 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms