RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 TAF7Q15545 349 aaPredicted RBP16.85■□□□□ 0.29
CCHCR1-205ENST00000428174 CCDC27Q2M243 656 aa16.85■□□□□ 0.29
CCHCR1-205ENST00000428174 NGEFQ8N5V2 710 aa16.85■□□□□ 0.29
CCHCR1-205ENST00000428174 SMARCC1Q92922 1105 aaPredicted RBP16.85■□□□□ 0.29
CCHCR1-205ENST00000428174 ITGB4P16144 1822 aa16.84■□□□□ 0.29
CCHCR1-205ENST00000428174 ATG3Q9NT62 314 aa16.84■□□□□ 0.29
CCHCR1-205ENST00000428174 ASAP1Q9ULH1 1129 aa16.84■□□□□ 0.29
CCHCR1-205ENST00000428174 BTBD11A6QL63 1104 aa16.83■□□□□ 0.28
CCHCR1-205ENST00000428174 PLSCR1O15162 318 aa16.83■□□□□ 0.28
CCHCR1-205ENST00000428174 CALD1Q05682 793 aaKnown RBP16.83■□□□□ 0.28
CCHCR1-205ENST00000428174 DEFB132Q7Z7B7 95 aa16.83■□□□□ 0.28
CCHCR1-205ENST00000428174 WWC1Q8IX03 1113 aa16.83■□□□□ 0.28
CCHCR1-205ENST00000428174 EP400Q96L91 3159 aa16.83■□□□□ 0.28
CCHCR1-205ENST00000428174 BTAF1O14981 1849 aa16.82■□□□□ 0.28
CCHCR1-205ENST00000428174 EN1Q05925 392 aaPredicted RBP16.82■□□□□ 0.28
CCHCR1-205ENST00000428174 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-205ENST00000428174 TNS1Q9HBL0 1735 aaKnown RBP16.82■□□□□ 0.28
CCHCR1-205ENST00000428174 PALLDQ8WX93 1383 aa16.81■□□□□ 0.28
CCHCR1-205ENST00000428174 SOCS7O14512 581 aa16.81■□□□□ 0.28
CCHCR1-205ENST00000428174 SLC39A6Q13433 755 aa16.81■□□□□ 0.28
CCHCR1-205ENST00000428174 TTC5Q8N0Z6 440 aa16.8■□□□□ 0.28
CCHCR1-205ENST00000428174 MIS18AQ9NYP9 233 aa16.8■□□□□ 0.28
CCHCR1-205ENST00000428174 LAS1LQ9Y4W2 734 aaKnown RBP16.8■□□□□ 0.28
CCHCR1-205ENST00000428174 HNRNPUQ00839 825 aaKnown RBP eCLIP16.79■□□□□ 0.28
CCHCR1-205ENST00000428174 EZH2Q15910 746 aaKnown RBP16.79■□□□□ 0.28
CCHCR1-205ENST00000428174 TXNRD1Q16881 649 aa16.79■□□□□ 0.28
CCHCR1-205ENST00000428174 ZNF790Q6PG37 636 aa16.79■□□□□ 0.28
CCHCR1-205ENST00000428174 CAMKK2Q96RR4 588 aa16.79■□□□□ 0.28
CCHCR1-205ENST00000428174 BABAM1Q9NWV8 329 aa16.79■□□□□ 0.28
CCHCR1-205ENST00000428174 KCNQ3O43525 872 aa16.78■□□□□ 0.28
CCHCR1-205ENST00000428174 PTCD1O75127 700 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-205ENST00000428174 WDR63Q8IWG1 891 aa16.78■□□□□ 0.28
CCHCR1-205ENST00000428174 RBM42Q9BTD8 480 aaKnown RBP16.78■□□□□ 0.28
CCHCR1-205ENST00000428174 TSPYL4Q9UJ04 414 aa16.78■□□□□ 0.28
CCHCR1-205ENST00000428174 SIPA1L3O60292 1781 aaPredicted RBP16.77■□□□□ 0.28
CCHCR1-205ENST00000428174 LOC102724428A0A0B4J2F2 783 aa16.77■□□□□ 0.28
CCHCR1-205ENST00000428174 CHL1O00533 1208 aa16.77■□□□□ 0.28
CCHCR1-205ENST00000428174 SIK1P57059 783 aa16.77■□□□□ 0.28
CCHCR1-205ENST00000428174 GNAI1P63096 354 aa16.77■□□□□ 0.28
CCHCR1-205ENST00000428174 SLC27A3Q5K4L6 730 aa16.77■□□□□ 0.28
CCHCR1-205ENST00000428174 CFAP44Q96MT7 982 aa16.77■□□□□ 0.28
CCHCR1-205ENST00000428174 IFT57Q9NWB7 429 aa16.77■□□□□ 0.28
CCHCR1-205ENST00000428174 IL16Q14005 1332 aa16.76■□□□□ 0.27
CCHCR1-205ENST00000428174 PROM2Q8N271 834 aa16.76■□□□□ 0.27
CCHCR1-205ENST00000428174 FMNL2Q96PY5 1086 aa16.76■□□□□ 0.27
CCHCR1-205ENST00000428174 CCNL1Q9UK58 526 aaPredicted RBP16.76■□□□□ 0.27
CCHCR1-205ENST00000428174 ZNF521Q96K83 1311 aa16.75■□□□□ 0.27
CCHCR1-205ENST00000428174 ZNF853P0CG23 659 aa16.75■□□□□ 0.27
CCHCR1-205ENST00000428174 ZNF496Q96IT1 587 aaPredicted RBP16.75■□□□□ 0.27
CCHCR1-205ENST00000428174 ATP6V1AP38606 617 aa16.74■□□□□ 0.27
CCHCR1-205ENST00000428174 KCNQ4P56696 695 aa16.74■□□□□ 0.27
CCHCR1-205ENST00000428174 SLC4A9Q96Q91 983 aa16.74■□□□□ 0.27
CCHCR1-205ENST00000428174 LRRC4BQ9NT99 713 aa16.74■□□□□ 0.27
CCHCR1-205ENST00000428174 PAPPAQ13219 1627 aa16.74■□□□□ 0.27
CCHCR1-205ENST00000428174 EIF4A1P60842 406 aaKnown RBP16.73■□□□□ 0.27
CCHCR1-205ENST00000428174 MBIPQ9NS73 344 aa16.73■□□□□ 0.27
CCHCR1-205ENST00000428174 HEG1Q9ULI3 1381 aa16.73■□□□□ 0.27
CCHCR1-205ENST00000428174 RGPD3A6NKT7 1758 aaPredicted RBP16.72■□□□□ 0.27
CCHCR1-205ENST00000428174 RGPD4Q7Z3J3 1758 aa16.72■□□□□ 0.27
CCHCR1-205ENST00000428174 KCPQ6ZWJ8 1503 aa16.72■□□□□ 0.27
CCHCR1-205ENST00000428174 HMGB2P26583 209 aaKnown RBP16.72■□□□□ 0.27
CCHCR1-205ENST00000428174 GOLGA2Q08379 1002 aa16.72■□□□□ 0.27
CCHCR1-205ENST00000428174 VSIG10Q8N0Z9 540 aa16.72■□□□□ 0.27
CCHCR1-205ENST00000428174 LY75O60449 1722 aa16.72■□□□□ 0.27
CCHCR1-205ENST00000428174 SNRPA1P09661 255 aaKnown RBP16.71■□□□□ 0.27
CCHCR1-205ENST00000428174 ITPK1Q13572 414 aa16.71■□□□□ 0.27
CCHCR1-205ENST00000428174 KDM3BQ7LBC6 1761 aa16.7■□□□□ 0.26
CCHCR1-205ENST00000428174 DNAJC10Q8IXB1 793 aa16.7■□□□□ 0.26
CCHCR1-205ENST00000428174 TSR2Q969E8 191 aaKnown RBP16.7■□□□□ 0.26
CCHCR1-205ENST00000428174 TEX13AQ9BXU3 409 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-205ENST00000428174 MYH16Q9H6N6 1097 aa16.7■□□□□ 0.26
CCHCR1-205ENST00000428174 SPINK5Q9NQ38 1064 aaPredicted RBP16.7■□□□□ 0.26
CCHCR1-205ENST00000428174 E9PSI1 815 aa16.69■□□□□ 0.26
CCHCR1-205ENST00000428174 UBR2Q8IWV8 1755 aa16.69■□□□□ 0.26
CCHCR1-205ENST00000428174 ZBED9Q6R2W3 1325 aa16.69■□□□□ 0.26
CCHCR1-205ENST00000428174 GIGYF1O75420 1035 aaPredicted RBP16.68■□□□□ 0.26
CCHCR1-205ENST00000428174 NBPF14Q5TI25 921 aa16.68■□□□□ 0.26
CCHCR1-205ENST00000428174 LINC00116Q8NCU8 138 aa16.68■□□□□ 0.26
CCHCR1-205ENST00000428174 FANCIQ9NVI1 1328 aa16.68■□□□□ 0.26
CCHCR1-205ENST00000428174 STARD3NLO95772 234 aa16.67■□□□□ 0.26
CCHCR1-205ENST00000428174 SLFN5Q08AF3 891 aa16.67■□□□□ 0.26
CCHCR1-205ENST00000428174 KRT24Q2M2I5 525 aa16.67■□□□□ 0.26
CCHCR1-205ENST00000428174 CDCA7LQ96GN5 454 aa16.67■□□□□ 0.26
CCHCR1-205ENST00000428174 RREB1Q92766 1687 aa16.66■□□□□ 0.26
CCHCR1-205ENST00000428174 PRAMEF22A3QJZ6 481 aa16.66■□□□□ 0.26
CCHCR1-205ENST00000428174 CYP19A1P11511 503 aaPredicted RBP16.66■□□□□ 0.26
CCHCR1-205ENST00000428174 STK32BQ9NY57 414 aa16.66■□□□□ 0.26
CCHCR1-205ENST00000428174 USP16Q9Y5T5 823 aa16.66■□□□□ 0.26
CCHCR1-205ENST00000428174 ZNF831Q5JPB2 1677 aa16.65■□□□□ 0.26
CCHCR1-205ENST00000428174 CRKLP46109 303 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-205ENST00000428174 RC3H1Q5TC82 1133 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-205ENST00000428174 DUSP27Q5VZP5 1158 aa16.65■□□□□ 0.26
CCHCR1-205ENST00000428174 C8orf58Q8NAV2 365 aa16.65■□□□□ 0.26
CCHCR1-205ENST00000428174 AK7Q96M32 723 aa16.65■□□□□ 0.26
CCHCR1-205ENST00000428174 YTHDC1Q96MU7 727 aaKnown RBP16.65■□□□□ 0.26
CCHCR1-205ENST00000428174 ANO8Q9HCE9 1232 aaPredicted RBP16.65■□□□□ 0.26
CCHCR1-205ENST00000428174 CNTNAP4Q9C0A0 1308 aa16.65■□□□□ 0.26
CCHCR1-205ENST00000428174 ELL2O00472 640 aaPredicted RBP16.64■□□□□ 0.25
CCHCR1-205ENST00000428174 EXOSC9Q06265 439 aaKnown RBP16.64■□□□□ 0.25
CCHCR1-205ENST00000428174 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms