RNA–Protein interactions for RNA: ENST00000428020.5

TMEM40-203, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM40, Length 431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-203ENST00000428020 BABAM1Q9NWV8 329 aa13.29□□□□□ -0.28
TMEM40-203ENST00000428020 FANCIQ9NVI1 1328 aa13.29□□□□□ -0.28
TMEM40-203ENST00000428020 ADAMTS7Q9UKP4 1686 aa13.28□□□□□ -0.28
TMEM40-203ENST00000428020 BTBD11A6QL63 1104 aa13.28□□□□□ -0.28
TMEM40-203ENST00000428020 CHL1O00533 1208 aa13.28□□□□□ -0.28
TMEM40-203ENST00000428020 ZNF853P0CG23 659 aa13.28□□□□□ -0.28
TMEM40-203ENST00000428020 TRMT2AQ8IZ69 625 aaKnown RBP13.28□□□□□ -0.28
TMEM40-203ENST00000428020 NFATC2IPQ8NCF5 419 aa13.28□□□□□ -0.28
TMEM40-203ENST00000428020 MBIPQ9NS73 344 aa13.28□□□□□ -0.28
TMEM40-203ENST00000428020 MIS18AQ9NYP9 233 aa13.28□□□□□ -0.28
TMEM40-203ENST00000428020 KAT6BQ8WYB5 2073 aa13.27□□□□□ -0.28
TMEM40-203ENST00000428020 SYTL4Q96C24 671 aaPredicted RBP13.27□□□□□ -0.29
TMEM40-203ENST00000428020 TMOD3Q9NYL9 352 aa13.27□□□□□ -0.29
TMEM40-203ENST00000428020 TTC5Q8N0Z6 440 aa13.26□□□□□ -0.29
TMEM40-203ENST00000428020 MRC1P22897 1456 aa13.25□□□□□ -0.29
TMEM40-203ENST00000428020 EXOSC9Q06265 439 aaKnown RBP13.25□□□□□ -0.29
TMEM40-203ENST00000428020 KRT27Q7Z3Y8 459 aa13.25□□□□□ -0.29
TMEM40-203ENST00000428020 PRIM1P49642 420 aaKnown RBP13.24□□□□□ -0.29
TMEM40-203ENST00000428020 ACSBG1Q96GR2 724 aa13.24□□□□□ -0.29
TMEM40-203ENST00000428020 SIPA1L3O60292 1781 aaPredicted RBP13.24□□□□□ -0.29
TMEM40-203ENST00000428020 DOT1LQ8TEK3 1739 aa13.24□□□□□ -0.29
TMEM40-203ENST00000428020 TOGARAM1Q9Y4F4 1720 aa13.23□□□□□ -0.29
TMEM40-203ENST00000428020 CT47B1P0C2W7 299 aaPredicted RBP13.23□□□□□ -0.29
TMEM40-203ENST00000428020 RGS12O14924 1447 aa13.22□□□□□ -0.29
TMEM40-203ENST00000428020 ELL2O00472 640 aaPredicted RBP13.22□□□□□ -0.29
TMEM40-203ENST00000428020 SLC39A6Q13433 755 aa13.22□□□□□ -0.29
TMEM40-203ENST00000428020 TWISTNBQ3B726 338 aaPredicted RBP13.22□□□□□ -0.29
TMEM40-203ENST00000428020 FAM182BQ5T319 152 aa13.22□□□□□ -0.29
TMEM40-203ENST00000428020 ZNF790Q6PG37 636 aa13.22□□□□□ -0.29
TMEM40-203ENST00000428020 PIGBQ92521 554 aa13.22□□□□□ -0.29
TMEM40-203ENST00000428020 RCAN3Q9UKA8 241 aa13.22□□□□□ -0.29
TMEM40-203ENST00000428020 ITGB4P16144 1822 aa13.22□□□□□ -0.29
TMEM40-203ENST00000428020 BRWD3Q6RI45 1802 aa13.22□□□□□ -0.29
TMEM40-203ENST00000428020 KDM3BQ7LBC6 1761 aa13.22□□□□□ -0.29
TMEM40-203ENST00000428020 FAM196AQ6ZSG2 479 aa13.21□□□□□ -0.29
TMEM40-203ENST00000428020 KCNQ3O43525 872 aa13.2□□□□□ -0.3
TMEM40-203ENST00000428020 EIF4A1P60842 406 aaKnown RBP13.2□□□□□ -0.3
TMEM40-203ENST00000428020 C8orf58Q8NAV2 365 aa13.2□□□□□ -0.3
TMEM40-203ENST00000428020 FMNL2Q96PY5 1086 aa13.2□□□□□ -0.3
TMEM40-203ENST00000428020 CHMP4AQ9BY43 222 aa13.2□□□□□ -0.3
TMEM40-203ENST00000428020 BCL9O00512 1426 aa13.2□□□□□ -0.3
TMEM40-203ENST00000428020 SOS1Q07889 1333 aaPredicted RBP13.19□□□□□ -0.3
TMEM40-203ENST00000428020 TSPYL6Q8N831 410 aa13.19□□□□□ -0.3
TMEM40-203ENST00000428020 ZNF428Q96B54 188 aa13.19□□□□□ -0.3
TMEM40-203ENST00000428020 VAMP4O75379 141 aa13.18□□□□□ -0.3
TMEM40-203ENST00000428020 KRT24Q2M2I5 525 aa13.18□□□□□ -0.3
TMEM40-203ENST00000428020 SMARCC1Q92922 1105 aaPredicted RBP13.18□□□□□ -0.3
TMEM40-203ENST00000428020 ATG3Q9NT62 314 aa13.18□□□□□ -0.3
TMEM40-203ENST00000428020 ASAP1Q9ULH1 1129 aa13.18□□□□□ -0.3
TMEM40-203ENST00000428020 KCNQ2O43526 872 aa13.17□□□□□ -0.3
TMEM40-203ENST00000428020 PTCD1O75127 700 aaKnown RBP13.17□□□□□ -0.3
TMEM40-203ENST00000428020 HOXB7P09629 217 aa13.17□□□□□ -0.3
TMEM40-203ENST00000428020 SNRPA1P09661 255 aaKnown RBP13.17□□□□□ -0.3
TMEM40-203ENST00000428020 ZNF496Q96IT1 587 aaPredicted RBP13.17□□□□□ -0.3
TMEM40-203ENST00000428020 RBM42Q9BTD8 480 aaKnown RBP13.17□□□□□ -0.3
TMEM40-203ENST00000428020 NHSQ6T4R5 1651 aa13.16□□□□□ -0.3
TMEM40-203ENST00000428020 EIF2S2P20042 333 aaKnown RBP13.16□□□□□ -0.3
TMEM40-203ENST00000428020 RARSP54136 660 aaKnown RBP13.16□□□□□ -0.3
TMEM40-203ENST00000428020 ALDH1L2Q3SY69 923 aa13.16□□□□□ -0.3
TMEM40-203ENST00000428020 CCDC30Q5VVM6 783 aa13.16□□□□□ -0.3
TMEM40-203ENST00000428020 STK31Q9BXU1 1019 aa13.16□□□□□ -0.3
TMEM40-203ENST00000428020 SMC4Q9NTJ3 1288 aa13.16□□□□□ -0.3
TMEM40-203ENST00000428020 SUPT16HQ9Y5B9 1047 aaKnown RBP13.16□□□□□ -0.3
TMEM40-203ENST00000428020 PAPPAQ13219 1627 aa13.16□□□□□ -0.3
TMEM40-203ENST00000428020 GIGYF1O75420 1035 aaPredicted RBP13.15□□□□□ -0.3
TMEM40-203ENST00000428020 CANXP27824 592 aaKnown RBP13.15□□□□□ -0.3
TMEM40-203ENST00000428020 SF3B2Q13435 895 aaKnown RBP13.15□□□□□ -0.3
TMEM40-203ENST00000428020 HDGFL1Q5TGJ6 251 aa13.15□□□□□ -0.3
TMEM40-203ENST00000428020 CCDC125Q86Z20 511 aa13.15□□□□□ -0.3
TMEM40-203ENST00000428020 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.15□□□□□ -0.3
TMEM40-203ENST00000428020 BCL11BQ9C0K0 894 aaPredicted RBP13.15□□□□□ -0.3
TMEM40-203ENST00000428020 HEG1Q9ULI3 1381 aa13.15□□□□□ -0.3
TMEM40-203ENST00000428020 SBF2Q86WG5 1849 aa13.15□□□□□ -0.3
TMEM40-203ENST00000428020 UBR2Q8IWV8 1755 aa13.15□□□□□ -0.31
TMEM40-203ENST00000428020 TCERG1O14776 1098 aaKnown RBP13.14□□□□□ -0.31
TMEM40-203ENST00000428020 TRIM37O94972 964 aa13.14□□□□□ -0.31
TMEM40-203ENST00000428020 NECTIN2Q92692 538 aa13.14□□□□□ -0.31
TMEM40-203ENST00000428020 BCL2L13Q9BXK5 485 aa13.14□□□□□ -0.31
TMEM40-203ENST00000428020 TEX13AQ9BXU3 409 aaPredicted RBP13.14□□□□□ -0.31
TMEM40-203ENST00000428020 PALLDQ8WX93 1383 aa13.14□□□□□ -0.31
TMEM40-203ENST00000428020 KCPQ6ZWJ8 1503 aa13.13□□□□□ -0.31
TMEM40-203ENST00000428020 SRCAPQ6ZRS2 3230 aa13.13□□□□□ -0.31
TMEM40-203ENST00000428020 BCAR3O75815 825 aa13.13□□□□□ -0.31
TMEM40-203ENST00000428020 VSIG10Q8N0Z9 540 aa13.13□□□□□ -0.31
TMEM40-203ENST00000428020 SSH1Q8WYL5 1049 aa13.13□□□□□ -0.31
TMEM40-203ENST00000428020 BTAF1O14981 1849 aa13.13□□□□□ -0.31
TMEM40-203ENST00000428020 FRAT1Q92837 279 aaPredicted RBP13.12□□□□□ -0.31
TMEM40-203ENST00000428020 KIF16BQ96L93 1317 aa13.12□□□□□ -0.31
TMEM40-203ENST00000428020 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
TMEM40-203ENST00000428020 PRAMEF22A3QJZ6 481 aa13.11□□□□□ -0.31
TMEM40-203ENST00000428020 IPO8O15397 1037 aaKnown RBP13.11□□□□□ -0.31
TMEM40-203ENST00000428020 STARD3NLO95772 234 aa13.11□□□□□ -0.31
TMEM40-203ENST00000428020 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
TMEM40-203ENST00000428020 NEFLP07196 543 aa13.11□□□□□ -0.31
TMEM40-203ENST00000428020 ATP6V1AP38606 617 aa13.11□□□□□ -0.31
TMEM40-203ENST00000428020 SIK1P57059 783 aa13.11□□□□□ -0.31
TMEM40-203ENST00000428020 PTF1AQ7RTS3 328 aa13.11□□□□□ -0.31
TMEM40-203ENST00000428020 DBF4Q9UBU7 674 aaPredicted RBP13.11□□□□□ -0.31
TMEM40-203ENST00000428020 C5P01031 1676 aa13.1□□□□□ -0.31
TMEM40-203ENST00000428020 RRP1P56182 461 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms