RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 POTEMA6NI47 508 aa12.05□□□□□ -0.48
LINC00963-204ENST00000427778 SLC15A2Q16348 729 aa12.05□□□□□ -0.48
LINC00963-204ENST00000427778 GPR162Q16538 588 aa12.05□□□□□ -0.48
LINC00963-204ENST00000427778 RAPGEF4Q8WZA2 1011 aa12.05□□□□□ -0.48
LINC00963-204ENST00000427778 ARXQ96QS3 562 aa12.05□□□□□ -0.48
LINC00963-204ENST00000427778 LY75O60449 1722 aa12.04□□□□□ -0.48
LINC00963-204ENST00000427778 TOGARAM1Q9Y4F4 1720 aa12.04□□□□□ -0.48
LINC00963-204ENST00000427778 PPM1GO15355 546 aaPredicted RBP12.04□□□□□ -0.48
LINC00963-204ENST00000427778 PTF1AQ7RTS3 328 aa12.04□□□□□ -0.48
LINC00963-204ENST00000427778 PROM2Q8N271 834 aa12.04□□□□□ -0.48
LINC00963-204ENST00000427778 ZCRB1Q8TBF4 217 aaKnown RBP12.04□□□□□ -0.48
LINC00963-204ENST00000427778 CREBZFQ9NS37 354 aa12.04□□□□□ -0.48
LINC00963-204ENST00000427778 IGSF1Q8N6C5 1336 aa12.04□□□□□ -0.48
LINC00963-204ENST00000427778 ITGB4P16144 1822 aa12.04□□□□□ -0.48
LINC00963-204ENST00000427778 TATP17735 454 aaPredicted RBP12.03□□□□□ -0.48
LINC00963-204ENST00000427778 TNNT2P45379 298 aaPredicted RBP12.03□□□□□ -0.48
LINC00963-204ENST00000427778 EIF4A2Q14240 407 aaKnown RBP12.03□□□□□ -0.48
LINC00963-204ENST00000427778 TXNRD1Q16881 649 aa12.03□□□□□ -0.48
LINC00963-204ENST00000427778 USHBP1Q8N6Y0 703 aa12.03□□□□□ -0.48
LINC00963-204ENST00000427778 EYA1Q99502 592 aa12.03□□□□□ -0.48
LINC00963-204ENST00000427778 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.03□□□□□ -0.48
LINC00963-204ENST00000427778 PCDH11XQ9BZA7 1347 aa12.03□□□□□ -0.48
LINC00963-204ENST00000427778 PCDH11YQ9BZA8 1340 aa12.03□□□□□ -0.48
LINC00963-204ENST00000427778 KDRP35968 1356 aa12.02□□□□□ -0.49
LINC00963-204ENST00000427778 PELP1Q8IZL8 1130 aaKnown RBP12.01□□□□□ -0.49
LINC00963-204ENST00000427778 DDX54Q8TDD1 881 aaKnown RBP12.01□□□□□ -0.49
LINC00963-204ENST00000427778 POTEGQ6S5H5 508 aa12□□□□□ -0.49
LINC00963-204ENST00000427778 KLHL34Q8N239 644 aa12□□□□□ -0.49
LINC00963-204ENST00000427778 COL3A1P02461 1466 aaPredicted RBP12□□□□□ -0.49
LINC00963-204ENST00000427778 CYP27B1O15528 508 aa11.99□□□□□ -0.49
LINC00963-204ENST00000427778 ATP10DQ9P241 1426 aa11.99□□□□□ -0.49
LINC00963-204ENST00000427778 NKX1-1Q15270 411 aaPredicted RBP11.98□□□□□ -0.49
LINC00963-204ENST00000427778 ACSBG1Q96GR2 724 aa11.98□□□□□ -0.49
LINC00963-204ENST00000427778 SPG7Q9UQ90 795 aa11.98□□□□□ -0.49
LINC00963-204ENST00000427778 TAF1LQ8IZX4 1826 aa11.97□□□□□ -0.49
LINC00963-204ENST00000427778 POTEB2H3BUK9 544 aa11.97□□□□□ -0.49
LINC00963-204ENST00000427778 HSPA6P17066 643 aa11.97□□□□□ -0.49
LINC00963-204ENST00000427778 IL13P35225 146 aa11.97□□□□□ -0.49
LINC00963-204ENST00000427778 MTHFSP49914 203 aa11.97□□□□□ -0.49
LINC00963-204ENST00000427778 CC2D1BQ5T0F9 858 aaKnown RBP11.97□□□□□ -0.49
LINC00963-204ENST00000427778 PHF12Q96QT6 1004 aa11.97□□□□□ -0.49
LINC00963-204ENST00000427778 VIRMAQ69YN4 1812 aaKnown RBP11.97□□□□□ -0.49
LINC00963-204ENST00000427778 WDR90Q96KV7 1748 aa11.96□□□□□ -0.49
LINC00963-204ENST00000427778 SCN11AQ9UI33 1791 aa11.95□□□□□ -0.5
LINC00963-204ENST00000427778 C5P01031 1676 aa11.95□□□□□ -0.5
LINC00963-204ENST00000427778 ZNF831Q5JPB2 1677 aa11.95□□□□□ -0.5
LINC00963-204ENST00000427778 PRIM1P49642 420 aaKnown RBP11.95□□□□□ -0.5
LINC00963-204ENST00000427778 SLC27A3Q5K4L6 730 aa11.95□□□□□ -0.5
LINC00963-204ENST00000427778 ADAMTS7Q9UKP4 1686 aa11.94□□□□□ -0.5
LINC00963-204ENST00000427778 PHKG2P15735 406 aa11.94□□□□□ -0.5
LINC00963-204ENST00000427778 POLD1P28340 1107 aa11.94□□□□□ -0.5
LINC00963-204ENST00000427778 ZNF827Q17R98 1081 aa11.93□□□□□ -0.5
LINC00963-204ENST00000427778 AMOTQ4VCS5 1084 aa11.93□□□□□ -0.5
LINC00963-204ENST00000427778 AEBP1Q8IUX7 1158 aa11.93□□□□□ -0.5
LINC00963-204ENST00000427778 IFNL2Q8IZJ0 200 aa11.93□□□□□ -0.5
LINC00963-204ENST00000427778 NLGN2Q8NFZ4 835 aa11.93□□□□□ -0.5
LINC00963-204ENST00000427778 GPBP1L1Q9HC44 474 aaPredicted RBP11.93□□□□□ -0.5
LINC00963-204ENST00000427778 ADCY9O60503 1353 aa11.92□□□□□ -0.5
LINC00963-204ENST00000427778 GRIN3BO60391 1043 aa11.92□□□□□ -0.5
LINC00963-204ENST00000427778 DIAPH1O60610 1272 aaKnown RBP11.92□□□□□ -0.5
LINC00963-204ENST00000427778 PLEKHO1Q53GL0 409 aaPredicted RBP11.92□□□□□ -0.5
LINC00963-204ENST00000427778 SULT6B1Q6IMI4 303 aa11.92□□□□□ -0.5
LINC00963-204ENST00000427778 SYTL4Q96C24 671 aaPredicted RBP11.92□□□□□ -0.5
LINC00963-204ENST00000427778 CICQ96RK0 1608 aaPredicted RBP11.91□□□□□ -0.5
LINC00963-204ENST00000427778 HSP90AB1P08238 724 aaKnown RBP11.91□□□□□ -0.5
LINC00963-204ENST00000427778 YBX3P16989 372 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC00963-204ENST00000427778 ZEB1P37275 1124 aaPredicted RBP11.91□□□□□ -0.5
LINC00963-204ENST00000427778 LRRC4BQ9NT99 713 aa11.91□□□□□ -0.5
LINC00963-204ENST00000427778 KDM6AO15550 1401 aaPredicted RBP11.91□□□□□ -0.5
LINC00963-204ENST00000427778 MRC1P22897 1456 aa11.9□□□□□ -0.5
LINC00963-204ENST00000427778 HMGB2P26583 209 aaKnown RBP11.9□□□□□ -0.5
LINC00963-204ENST00000427778 SLC16A10Q8TF71 515 aa11.9□□□□□ -0.5
LINC00963-204ENST00000427778 DCAF5Q96JK2 942 aa11.9□□□□□ -0.5
LINC00963-204ENST00000427778 PALLDQ8WX93 1383 aa11.9□□□□□ -0.5
LINC00963-204ENST00000427778 ERVV-2B6SEH9 535 aa11.89□□□□□ -0.51
LINC00963-204ENST00000427778 PPP2R1AP30153 589 aa11.89□□□□□ -0.51
LINC00963-204ENST00000427778 ZNF530Q6P9A1 599 aaPredicted RBP11.89□□□□□ -0.51
LINC00963-204ENST00000427778 PIGBQ92521 554 aa11.89□□□□□ -0.51
LINC00963-204ENST00000427778 SMARCC1Q92922 1105 aaPredicted RBP11.89□□□□□ -0.51
LINC00963-204ENST00000427778 PCDH10Q9P2E7 1040 aa11.89□□□□□ -0.51
LINC00963-204ENST00000427778 UBR3Q6ZT12 1888 aa11.89□□□□□ -0.51
LINC00963-204ENST00000427778 C4BP0C0L5 1744 aa11.89□□□□□ -0.51
LINC00963-204ENST00000427778 COL5A3P25940 1745 aaPredicted RBP11.89□□□□□ -0.51
LINC00963-204ENST00000427778 MPRIPQ6WCQ1 1025 aa11.88□□□□□ -0.51
LINC00963-204ENST00000427778 ZNF526Q8TF50 670 aaPredicted RBP11.88□□□□□ -0.51
LINC00963-204ENST00000427778 CFAP53Q96M91 514 aa11.88□□□□□ -0.51
LINC00963-204ENST00000427778 TMOD3Q9NYL9 352 aa11.88□□□□□ -0.51
LINC00963-204ENST00000427778 PNPLA7Q6ZV29 1317 aa11.87□□□□□ -0.51
LINC00963-204ENST00000427778 SIPA1L3O60292 1781 aaPredicted RBP11.87□□□□□ -0.51
LINC00963-204ENST00000427778 CCNL1Q9UK58 526 aaPredicted RBP11.87□□□□□ -0.51
LINC00963-204ENST00000427778 AKAP4Q5JQC9 854 aa11.86□□□□□ -0.51
LINC00963-204ENST00000427778 C1orf141Q5JVX7 400 aa11.86□□□□□ -0.51
LINC00963-204ENST00000427778 METRNQ9UJH8 293 aa11.86□□□□□ -0.51
LINC00963-204ENST00000427778 UBR2Q8IWV8 1755 aa11.86□□□□□ -0.51
LINC00963-204ENST00000427778 HMOX1P09601 288 aa11.85□□□□□ -0.51
LINC00963-204ENST00000427778 MAMSTRQ6ZN01 415 aa11.84□□□□□ -0.51
LINC00963-204ENST00000427778 TJP1Q07157 1748 aa11.83□□□□□ -0.52
LINC00963-204ENST00000427778 LOC102724428A0A0B4J2F2 783 aa11.83□□□□□ -0.52
LINC00963-204ENST00000427778 U2SURPO15042 1029 aaKnown RBP11.83□□□□□ -0.52
LINC00963-204ENST00000427778 APLP1P51693 650 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms