RNA–Protein interactions for RNA: ENST00000427737.5

TUBA4A-205, Transcript of tubulin alpha 4a, humanhuman

TSL 3

Gene TUBA4A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-205ENST00000427737 POLD1P28340 1107 aa16.93■□□□□ 0.3
TUBA4A-205ENST00000427737 ERVV-2B6SEH9 535 aa16.92■□□□□ 0.3
TUBA4A-205ENST00000427737 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
TUBA4A-205ENST00000427737 AMIGO3Q86WK7 504 aa16.92■□□□□ 0.3
TUBA4A-205ENST00000427737 LINC00116Q8NCU8 138 aa16.92■□□□□ 0.3
TUBA4A-205ENST00000427737 ATG3Q9NT62 314 aa16.92■□□□□ 0.3
TUBA4A-205ENST00000427737 UBR3Q6ZT12 1888 aa16.91■□□□□ 0.3
TUBA4A-205ENST00000427737 GPR162Q16538 588 aa16.91■□□□□ 0.3
TUBA4A-205ENST00000427737 C1orf141Q5JVX7 400 aa16.91■□□□□ 0.3
TUBA4A-205ENST00000427737 AK7Q96M32 723 aa16.91■□□□□ 0.3
TUBA4A-205ENST00000427737 COL3A1P02461 1466 aaPredicted RBP16.91■□□□□ 0.3
TUBA4A-205ENST00000427737 GIGYF1O75420 1035 aaPredicted RBP16.9■□□□□ 0.3
TUBA4A-205ENST00000427737 HMOX1P09601 288 aa16.9■□□□□ 0.3
TUBA4A-205ENST00000427737 ATP6V1AP38606 617 aa16.9■□□□□ 0.3
TUBA4A-205ENST00000427737 ITPK1Q13572 414 aa16.9■□□□□ 0.3
TUBA4A-205ENST00000427737 MSL1Q68DK7 614 aa16.9■□□□□ 0.3
TUBA4A-205ENST00000427737 DIAPH1O60610 1272 aaKnown RBP16.89■□□□□ 0.29
TUBA4A-205ENST00000427737 CABP4P57796 275 aa16.89■□□□□ 0.29
TUBA4A-205ENST00000427737 SMIM5Q71RC9 77 aa16.89■□□□□ 0.29
TUBA4A-205ENST00000427737 KLHL34Q8N239 644 aa16.89■□□□□ 0.29
TUBA4A-205ENST00000427737 FLAD1Q8NFF5 587 aa16.89■□□□□ 0.29
TUBA4A-205ENST00000427737 PHF14O94880 888 aa16.88■□□□□ 0.29
TUBA4A-205ENST00000427737 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.87■□□□□ 0.29
TUBA4A-205ENST00000427737 SLC4A9Q96Q91 983 aa16.87■□□□□ 0.29
TUBA4A-205ENST00000427737 ZNF831Q5JPB2 1677 aa16.87■□□□□ 0.29
TUBA4A-205ENST00000427737 SCN11AQ9UI33 1791 aa16.87■□□□□ 0.29
TUBA4A-205ENST00000427737 GNPATO15228 680 aa16.86■□□□□ 0.29
TUBA4A-205ENST00000427737 SSFA2P28290 1259 aa16.86■□□□□ 0.29
TUBA4A-205ENST00000427737 RBM42Q9BTD8 480 aaKnown RBP16.86■□□□□ 0.29
TUBA4A-205ENST00000427737 COL5A3P25940 1745 aaPredicted RBP16.85■□□□□ 0.29
TUBA4A-205ENST00000427737 AKAP4Q5JQC9 854 aa16.85■□□□□ 0.29
TUBA4A-205ENST00000427737 NFATC2IPQ8NCF5 419 aa16.85■□□□□ 0.29
TUBA4A-205ENST00000427737 IFFO2Q5TF58 517 aa16.84■□□□□ 0.29
TUBA4A-205ENST00000427737 NLGN2Q8NFZ4 835 aa16.84■□□□□ 0.29
TUBA4A-205ENST00000427737 MRC1P22897 1456 aa16.83■□□□□ 0.28
TUBA4A-205ENST00000427737 MTHFSDQ2M296 383 aaKnown RBP16.83■□□□□ 0.28
TUBA4A-205ENST00000427737 U2SURPO15042 1029 aaKnown RBP16.82■□□□□ 0.28
TUBA4A-205ENST00000427737 PTCD1O75127 700 aaKnown RBP16.82■□□□□ 0.28
TUBA4A-205ENST00000427737 LGR6Q9HBX8 967 aa16.82■□□□□ 0.28
TUBA4A-205ENST00000427737 ADAMTS7Q9UKP4 1686 aa16.81■□□□□ 0.28
TUBA4A-205ENST00000427737 GRIN3BO60391 1043 aa16.81■□□□□ 0.28
TUBA4A-205ENST00000427737 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
TUBA4A-205ENST00000427737 SLC52A2Q9HAB3 445 aa16.81■□□□□ 0.28
TUBA4A-205ENST00000427737 VIRMAQ69YN4 1812 aaKnown RBP16.81■□□□□ 0.28
TUBA4A-205ENST00000427737 CICQ96RK0 1608 aaPredicted RBP16.81■□□□□ 0.28
TUBA4A-205ENST00000427737 CNTNAP4Q9C0A0 1308 aa16.8■□□□□ 0.28
TUBA4A-205ENST00000427737 TJP1Q07157 1748 aa16.8■□□□□ 0.28
TUBA4A-205ENST00000427737 RNMTO43148 476 aaKnown RBP16.8■□□□□ 0.28
TUBA4A-205ENST00000427737 YBX3P16989 372 aaKnown RBP eCLIP16.79■□□□□ 0.286e-7■■■□□ 17.4
TUBA4A-205ENST00000427737 RTCBQ9Y3I0 505 aaKnown RBP16.79■□□□□ 0.28
TUBA4A-205ENST00000427737 PPP2R1AP30153 589 aa16.78■□□□□ 0.28
TUBA4A-205ENST00000427737 RC3H1Q5TC82 1133 aaKnown RBP16.78■□□□□ 0.28
TUBA4A-205ENST00000427737 CFAP53Q96M91 514 aa16.78■□□□□ 0.28
TUBA4A-205ENST00000427737 MYH14Q7Z406 1995 aaKnown RBP16.78■□□□□ 0.28
TUBA4A-205ENST00000427737 ATP10DQ9P241 1426 aa16.78■□□□□ 0.28
TUBA4A-205ENST00000427737 C4AP0C0L4 1744 aa16.77■□□□□ 0.28
TUBA4A-205ENST00000427737 TRAPPC3LQ5T215 181 aa16.77■□□□□ 0.28
TUBA4A-205ENST00000427737 KCPQ6ZWJ8 1503 aa16.76■□□□□ 0.27
TUBA4A-205ENST00000427737 RPS6KA4O75676 772 aa16.76■□□□□ 0.27
TUBA4A-205ENST00000427737 CRKLP46109 303 aaKnown RBP16.76■□□□□ 0.27
TUBA4A-205ENST00000427737 SLC39A6Q13433 755 aa16.76■□□□□ 0.27
TUBA4A-205ENST00000427737 ARHGEF1Q92888 912 aaKnown RBP16.76■□□□□ 0.27
TUBA4A-205ENST00000427737 CD2APQ9Y5K6 639 aa16.76■□□□□ 0.27
TUBA4A-205ENST00000427737 ADCY9O60503 1353 aa16.76■□□□□ 0.27
TUBA4A-205ENST00000427737 ADRA2BP18089 450 aa16.75■□□□□ 0.27
TUBA4A-205ENST00000427737 PRKAR2BP31323 418 aa16.74■□□□□ 0.27
TUBA4A-205ENST00000427737 GAS2L2Q8NHY3 880 aa16.74■□□□□ 0.27
TUBA4A-205ENST00000427737 RSPH6AQ9H0K4 717 aa16.74■□□□□ 0.27
TUBA4A-205ENST00000427737 MMP10P09238 476 aa16.73■□□□□ 0.27
TUBA4A-205ENST00000427737 RFC4P35249 363 aa16.73■□□□□ 0.27
TUBA4A-205ENST00000427737 DNAJC10Q8IXB1 793 aa16.73■□□□□ 0.27
TUBA4A-205ENST00000427737 PHACTR3Q96KR7 559 aa16.73■□□□□ 0.27
TUBA4A-205ENST00000427737 UBR2Q8IWV8 1755 aa16.73■□□□□ 0.27
TUBA4A-205ENST00000427737 GNAT3A8MTJ3 354 aa16.72■□□□□ 0.27
TUBA4A-205ENST00000427737 GYS1P13807 737 aa16.72■□□□□ 0.27
TUBA4A-205ENST00000427737 IL17REQ8NFR9 667 aa16.72■□□□□ 0.27
TUBA4A-205ENST00000427737 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
TUBA4A-205ENST00000427737 U2AF1L5P0DN76 240 aaPredicted RBP16.71■□□□□ 0.27
TUBA4A-205ENST00000427737 U2AF1Q01081 240 aaKnown RBP eCLIP16.71■□□□□ 0.27
TUBA4A-205ENST00000427737 INTS5Q6P9B9 1019 aaKnown RBP16.71■□□□□ 0.27
TUBA4A-205ENST00000427737 NLGN1Q8N2Q7 840 aa16.71■□□□□ 0.27
TUBA4A-205ENST00000427737 SIPA1L3O60292 1781 aaPredicted RBP16.71■□□□□ 0.27
TUBA4A-205ENST00000427737 TEFQ10587 303 aa16.7■□□□□ 0.26
TUBA4A-205ENST00000427737 CCDC87Q9NVE4 849 aa16.7■□□□□ 0.26
TUBA4A-205ENST00000427737 CEMIPQ8WUJ3 1361 aa16.69■□□□□ 0.26
TUBA4A-205ENST00000427737 CYP19A1P11511 503 aaPredicted RBP16.69■□□□□ 0.26
TUBA4A-205ENST00000427737 GPBP1L1Q9HC44 474 aaPredicted RBP16.69■□□□□ 0.26
TUBA4A-205ENST00000427737 SRP68Q9UHB9 627 aaKnown RBP16.69■□□□□ 0.26
TUBA4A-205ENST00000427737 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
TUBA4A-205ENST00000427737 TTC5Q8N0Z6 440 aa16.68■□□□□ 0.26
TUBA4A-205ENST00000427737 WWC3Q9ULE0 1092 aa16.68■□□□□ 0.26
TUBA4A-205ENST00000427737 C10orf71Q711Q0 1435 aa16.68■□□□□ 0.26
TUBA4A-205ENST00000427737 KIF13BQ9NQT8 1826 aa16.68■□□□□ 0.26
TUBA4A-205ENST00000427737 SOS1Q07889 1333 aaPredicted RBP16.68■□□□□ 0.26
TUBA4A-205ENST00000427737 KIAA1551Q9HCM1 1747 aa16.67■□□□□ 0.26
TUBA4A-205ENST00000427737 FCHSD2O94868 740 aa16.67■□□□□ 0.26
TUBA4A-205ENST00000427737 HSPA6P17066 643 aa16.67■□□□□ 0.26
TUBA4A-205ENST00000427737 VSIG10Q8N0Z9 540 aa16.67■□□□□ 0.26
TUBA4A-205ENST00000427737 ZBTB1Q9Y2K1 713 aa16.67■□□□□ 0.26
TUBA4A-205ENST00000427737 PXDNLA1KZ92 1463 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms