RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 IGSF1Q8N6C5 1336 aa10.84□□□□□ -0.67
SMARCAL1-206ENST00000427645 PRKAR2BP31323 418 aa10.83□□□□□ -0.68
SMARCAL1-206ENST00000427645 CCDC27Q2M243 656 aa10.83□□□□□ -0.68
SMARCAL1-206ENST00000427645 USHBP1Q8N6Y0 703 aa10.83□□□□□ -0.68
SMARCAL1-206ENST00000427645 TFCP2L1Q9NZI6 479 aa10.83□□□□□ -0.68
SMARCAL1-206ENST00000427645 PNPLA7Q6ZV29 1317 aa10.83□□□□□ -0.68
SMARCAL1-206ENST00000427645 KDRP35968 1356 aa10.82□□□□□ -0.68
SMARCAL1-206ENST00000427645 TMPOP42166 694 aaKnown RBP10.82□□□□□ -0.68
SMARCAL1-206ENST00000427645 GPR162Q16538 588 aa10.82□□□□□ -0.68
SMARCAL1-206ENST00000427645 PAPPAQ13219 1627 aa10.82□□□□□ -0.68
SMARCAL1-206ENST00000427645 BTAF1O14981 1849 aa10.81□□□□□ -0.68
SMARCAL1-206ENST00000427645 NBPF6Q5VWK0 638 aa10.81□□□□□ -0.68
SMARCAL1-206ENST00000427645 WDR63Q8IWG1 891 aa10.81□□□□□ -0.68
SMARCAL1-206ENST00000427645 NLGN2Q8NFZ4 835 aa10.81□□□□□ -0.68
SMARCAL1-206ENST00000427645 NBPF4Q96M43 638 aa10.81□□□□□ -0.68
SMARCAL1-206ENST00000427645 SALL2Q9Y467 1007 aaPredicted RBP10.81□□□□□ -0.68
SMARCAL1-206ENST00000427645 RIPK4P57078 832 aa10.8□□□□□ -0.68
SMARCAL1-206ENST00000427645 LMOD3Q0VAK6 560 aa10.8□□□□□ -0.68
SMARCAL1-206ENST00000427645 NFE2L2Q16236 605 aa10.8□□□□□ -0.68
SMARCAL1-206ENST00000427645 SLC27A3Q5K4L6 730 aa10.8□□□□□ -0.68
SMARCAL1-206ENST00000427645 ZCRB1Q8TBF4 217 aaKnown RBP10.8□□□□□ -0.68
SMARCAL1-206ENST00000427645 FAM208AQ9UK61 1670 aaKnown RBP10.79□□□□□ -0.68
SMARCAL1-206ENST00000427645 MEGF6O75095 1541 aa10.79□□□□□ -0.68
SMARCAL1-206ENST00000427645 POLD1P28340 1107 aa10.79□□□□□ -0.68
SMARCAL1-206ENST00000427645 CALD1Q05682 793 aaKnown RBP10.79□□□□□ -0.68
SMARCAL1-206ENST00000427645 GOLGA2Q08379 1002 aa10.79□□□□□ -0.68
SMARCAL1-206ENST00000427645 NEUROD2Q15784 382 aa10.79□□□□□ -0.68
SMARCAL1-206ENST00000427645 MSL1Q68DK7 614 aa10.79□□□□□ -0.68
SMARCAL1-206ENST00000427645 WWC1Q8IX03 1113 aa10.79□□□□□ -0.68
SMARCAL1-206ENST00000427645 GAS2L2Q8NHY3 880 aa10.79□□□□□ -0.68
SMARCAL1-206ENST00000427645 PHACTR3Q96KR7 559 aa10.79□□□□□ -0.68
SMARCAL1-206ENST00000427645 ZNF219Q9P2Y4 722 aaPredicted RBP10.79□□□□□ -0.68
SMARCAL1-206ENST00000427645 CCNL1Q9UK58 526 aaPredicted RBP10.79□□□□□ -0.68
SMARCAL1-206ENST00000427645 SENP3-EIF4A1A0A087X0R7 540 aa10.78□□□□□ -0.68
SMARCAL1-206ENST00000427645 AMOTQ4VCS5 1084 aa10.78□□□□□ -0.68
SMARCAL1-206ENST00000427645 PLEKHO1Q53GL0 409 aaPredicted RBP10.78□□□□□ -0.68
SMARCAL1-206ENST00000427645 SMIM5Q71RC9 77 aa10.78□□□□□ -0.68
SMARCAL1-206ENST00000427645 COL23A1Q86Y22 540 aaPredicted RBP10.78□□□□□ -0.68
SMARCAL1-206ENST00000427645 AEBP1Q8IUX7 1158 aa10.78□□□□□ -0.68
SMARCAL1-206ENST00000427645 ZNF521Q96K83 1311 aa10.78□□□□□ -0.68
SMARCAL1-206ENST00000427645 PLEKHG2Q9H7P9 1386 aa10.77□□□□□ -0.68
SMARCAL1-206ENST00000427645 HTATSF1O43719 755 aaKnown RBP10.77□□□□□ -0.69
SMARCAL1-206ENST00000427645 C1QTNF8P60827 252 aa10.77□□□□□ -0.69
SMARCAL1-206ENST00000427645 SLC16A10Q8TF71 515 aa10.77□□□□□ -0.69
SMARCAL1-206ENST00000427645 RAPGEF4Q8WZA2 1011 aa10.77□□□□□ -0.69
SMARCAL1-206ENST00000427645 MAP3K5Q99683 1374 aa10.77□□□□□ -0.69
SMARCAL1-206ENST00000427645 NCAPD2Q15021 1401 aa10.76□□□□□ -0.69
SMARCAL1-206ENST00000427645 E9PSI1 815 aa10.76□□□□□ -0.69
SMARCAL1-206ENST00000427645 YBX3P16989 372 aaKnown RBP eCLIP10.76□□□□□ -0.69
SMARCAL1-206ENST00000427645 FKBP8Q14318 412 aa10.76□□□□□ -0.69
SMARCAL1-206ENST00000427645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.76□□□□□ -0.691e-6■□□□□ 9.8
SMARCAL1-206ENST00000427645 RRP7AQ9Y3A4 280 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-206ENST00000427645 IL16Q14005 1332 aa10.76□□□□□ -0.69
SMARCAL1-206ENST00000427645 RGPD2P0DJD1 1756 aa10.75□□□□□ -0.69
SMARCAL1-206ENST00000427645 KAT6BQ8WYB5 2073 aa10.75□□□□□ -0.69
SMARCAL1-206ENST00000427645 TATP17735 454 aaPredicted RBP10.75□□□□□ -0.69
SMARCAL1-206ENST00000427645 SLFN5Q08AF3 891 aa10.75□□□□□ -0.69
SMARCAL1-206ENST00000427645 MTHFSDQ2M296 383 aaKnown RBP10.75□□□□□ -0.69
SMARCAL1-206ENST00000427645 MPRIPQ6WCQ1 1025 aa10.75□□□□□ -0.69
SMARCAL1-206ENST00000427645 RTF1Q92541 710 aaKnown RBP10.75□□□□□ -0.69
SMARCAL1-206ENST00000427645 WWC3Q9ULE0 1092 aa10.75□□□□□ -0.69
SMARCAL1-206ENST00000427645 TRIM35Q9UPQ4 493 aa10.75□□□□□ -0.69
SMARCAL1-206ENST00000427645 AMIGO3Q86WK7 504 aa10.74□□□□□ -0.69
SMARCAL1-206ENST00000427645 TRMT2AQ8IZ69 625 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-206ENST00000427645 SPG7Q9UQ90 795 aa10.74□□□□□ -0.69
SMARCAL1-206ENST00000427645 DOT1LQ8TEK3 1739 aa10.74□□□□□ -0.69
SMARCAL1-206ENST00000427645 GNAT3A8MTJ3 354 aa10.73□□□□□ -0.69
SMARCAL1-206ENST00000427645 CYP27B1O15528 508 aa10.73□□□□□ -0.69
SMARCAL1-206ENST00000427645 AKAP4Q5JQC9 854 aa10.73□□□□□ -0.69
SMARCAL1-206ENST00000427645 MYH16Q9H6N6 1097 aa10.73□□□□□ -0.69
SMARCAL1-206ENST00000427645 DLG5Q8TDM6 1919 aa10.72□□□□□ -0.69
SMARCAL1-206ENST00000427645 GNAI1P63096 354 aa10.72□□□□□ -0.69
SMARCAL1-206ENST00000427645 C1orf141Q5JVX7 400 aa10.72□□□□□ -0.69
SMARCAL1-206ENST00000427645 CDCA7LQ96GN5 454 aa10.72□□□□□ -0.69
SMARCAL1-206ENST00000427645 SHANK3Q9BYB0 1731 aa10.72□□□□□ -0.69
SMARCAL1-206ENST00000427645 GIGYF1O75420 1035 aaPredicted RBP10.71□□□□□ -0.69
SMARCAL1-206ENST00000427645 PHF14O94880 888 aa10.71□□□□□ -0.69
SMARCAL1-206ENST00000427645 HSP90AB1P08238 724 aaKnown RBP10.71□□□□□ -0.69
SMARCAL1-206ENST00000427645 DUSP27Q5VZP5 1158 aa10.71□□□□□ -0.69
SMARCAL1-206ENST00000427645 PALLDQ8WX93 1383 aa10.71□□□□□ -0.69
SMARCAL1-206ENST00000427645 TUBGCP6Q96RT7 1819 aa10.71□□□□□ -0.69
SMARCAL1-206ENST00000427645 PCDH11XQ9BZA7 1347 aa10.7□□□□□ -0.7
SMARCAL1-206ENST00000427645 PCDH11YQ9BZA8 1340 aa10.7□□□□□ -0.7
SMARCAL1-206ENST00000427645 IFNL2Q8IZJ0 200 aa10.7□□□□□ -0.7
SMARCAL1-206ENST00000427645 CFAP44Q96MT7 982 aa10.7□□□□□ -0.7
SMARCAL1-206ENST00000427645 IFT57Q9NWB7 429 aa10.7□□□□□ -0.7
SMARCAL1-206ENST00000427645 BABAM1Q9NWV8 329 aa10.7□□□□□ -0.7
SMARCAL1-206ENST00000427645 LY75O60449 1722 aa10.7□□□□□ -0.7
SMARCAL1-206ENST00000427645 CT47B1P0C2W7 299 aaPredicted RBP10.69□□□□□ -0.7
SMARCAL1-206ENST00000427645 ZNF530Q6P9A1 599 aaPredicted RBP10.69□□□□□ -0.7
SMARCAL1-206ENST00000427645 ZNF526Q8TF50 670 aaPredicted RBP10.69□□□□□ -0.7
SMARCAL1-206ENST00000427645 PIGBQ92521 554 aa10.69□□□□□ -0.7
SMARCAL1-206ENST00000427645 SPINK5Q9NQ38 1064 aaPredicted RBP10.69□□□□□ -0.7
SMARCAL1-206ENST00000427645 GRIN3BO60391 1043 aa10.68□□□□□ -0.7
SMARCAL1-206ENST00000427645 ZNF853P0CG23 659 aa10.68□□□□□ -0.7
SMARCAL1-206ENST00000427645 AK7Q96M32 723 aa10.68□□□□□ -0.7
SMARCAL1-206ENST00000427645 CEP350Q5VT06 3117 aa10.68□□□□□ -0.7
SMARCAL1-206ENST00000427645 CHD4Q14839 1912 aa10.67□□□□□ -0.7
SMARCAL1-206ENST00000427645 TAF7Q15545 349 aaPredicted RBP10.67□□□□□ -0.7
SMARCAL1-206ENST00000427645 MCM10Q7L590 875 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms