RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 HIP1O00291 1037 aa15.5■□□□□ 0.07
SPG11-202ENST00000427534 TEX35Q5T0J7 233 aa15.5■□□□□ 0.07
SPG11-202ENST00000427534 DUSP27Q5VZP5 1158 aa15.5■□□□□ 0.07
SPG11-202ENST00000427534 RSPH6AQ9H0K4 717 aa15.5■□□□□ 0.07
SPG11-202ENST00000427534 MMRN2Q9H8L6 949 aa15.5■□□□□ 0.07
SPG11-202ENST00000427534 JAG2Q9Y219 1238 aa15.5■□□□□ 0.07
SPG11-202ENST00000427534 SEPT7Q16181 437 aaKnown RBP15.5■□□□□ 0.07
SPG11-202ENST00000427534 CCDC181Q5TID7 509 aa15.5■□□□□ 0.07
SPG11-202ENST00000427534 EMILIN1Q9Y6C2 1016 aa15.5■□□□□ 0.07
SPG11-202ENST00000427534 CT47B1P0C2W7 299 aaPredicted RBP15.5■□□□□ 0.07
SPG11-202ENST00000427534 WDR97A6NE52 1622 aa15.49■□□□□ 0.07
SPG11-202ENST00000427534 SEC63Q9UGP8 760 aaKnown RBP15.49■□□□□ 0.07
SPG11-202ENST00000427534 TRAK2O60296 914 aa15.49■□□□□ 0.07
SPG11-202ENST00000427534 HSP90B2PQ58FF3 399 aa15.48■□□□□ 0.07
SPG11-202ENST00000427534 TMEM57Q8N5G2 664 aa15.48■□□□□ 0.07
SPG11-202ENST00000427534 SPTY2D1Q68D10 685 aaPredicted RBP15.48■□□□□ 0.07
SPG11-202ENST00000427534 CABLES1Q8TDN4 633 aa15.48■□□□□ 0.07
SPG11-202ENST00000427534 UBAP1LF5GYI3 381 aa15.48■□□□□ 0.07
SPG11-202ENST00000427534 ZNF652Q9Y2D9 606 aa15.48■□□□□ 0.07
SPG11-202ENST00000427534 BLOC1S2Q6QNY1 142 aa15.48■□□□□ 0.07
SPG11-202ENST00000427534 PPFIBP1Q86W92 1011 aa15.48■□□□□ 0.07
SPG11-202ENST00000427534 CCDC83Q8IWF9 413 aa15.48■□□□□ 0.07
SPG11-202ENST00000427534 FEZ1Q99689 392 aa15.48■□□□□ 0.07
SPG11-202ENST00000427534 ZSCAN25Q6NSZ9 544 aa15.48■□□□□ 0.07
SPG11-202ENST00000427534 PRPF40BQ6NWY9 871 aaKnown RBP15.48■□□□□ 0.07
SPG11-202ENST00000427534 AMOTL2Q9Y2J4 779 aa15.48■□□□□ 0.07
SPG11-202ENST00000427534 RFC4P35249 363 aa15.47■□□□□ 0.07
SPG11-202ENST00000427534 CCT2P78371 535 aaKnown RBP15.47■□□□□ 0.07
SPG11-202ENST00000427534 NSD3Q9BZ95 1437 aa15.47■□□□□ 0.07
SPG11-202ENST00000427534 ATF7IPQ6VMQ6 1270 aa15.47■□□□□ 0.07
SPG11-202ENST00000427534 ATAD2Q6PL18 1390 aa15.47■□□□□ 0.07
SPG11-202ENST00000427534 TAF7Q15545 349 aaPredicted RBP15.47■□□□□ 0.07
SPG11-202ENST00000427534 ABCA10Q8WWZ4 1543 aa15.47■□□□□ 0.07
SPG11-202ENST00000427534 EXOC5O00471 708 aa15.47■□□□□ 0.07
SPG11-202ENST00000427534 IFIT1P09914 478 aaKnown RBP15.47■□□□□ 0.07
SPG11-202ENST00000427534 ZNHIT6Q9NWK9 470 aaKnown RBP15.47■□□□□ 0.07
SPG11-202ENST00000427534 NOL7Q9UMY1 257 aaKnown RBP15.47■□□□□ 0.07
SPG11-202ENST00000427534 HAND2P61296 217 aa15.47■□□□□ 0.07
SPG11-202ENST00000427534 ISM2Q6H9L7 571 aa15.47■□□□□ 0.07
SPG11-202ENST00000427534 MVPQ14764 893 aaKnown RBP15.46■□□□□ 0.07
SPG11-202ENST00000427534 RABEP1Q15276 862 aa15.46■□□□□ 0.07
SPG11-202ENST00000427534 CHD1LQ86WJ1 897 aa15.46■□□□□ 0.07
SPG11-202ENST00000427534 KRT28Q7Z3Y7 464 aa15.46■□□□□ 0.07
SPG11-202ENST00000427534 FAM43AQ8N2R8 423 aa15.46■□□□□ 0.07
SPG11-202ENST00000427534 IMMTQ16891 758 aaKnown RBP15.46■□□□□ 0.07
SPG11-202ENST00000427534 LRRFIP2Q9Y608 721 aaKnown RBP15.46■□□□□ 0.07
SPG11-202ENST00000427534 SPATA32Q96LK8 384 aa15.46■□□□□ 0.06
SPG11-202ENST00000427534 PICALMQ13492 652 aa15.45■□□□□ 0.06
SPG11-202ENST00000427534 CEP57L1Q8IYX8 460 aa15.45■□□□□ 0.06
SPG11-202ENST00000427534 RDXP35241 583 aaKnown RBP15.45■□□□□ 0.06
SPG11-202ENST00000427534 STIM1Q13586 685 aa15.45■□□□□ 0.06
SPG11-202ENST00000427534 ZNF444Q8N0Y2 327 aaPredicted RBP15.45■□□□□ 0.06
SPG11-202ENST00000427534 FAM83GA6ND36 823 aa15.45■□□□□ 0.06
SPG11-202ENST00000427534 CDR1P51861 262 aa15.45■□□□□ 0.06
SPG11-202ENST00000427534 PANK2Q9BZ23 570 aa15.45■□□□□ 0.06
SPG11-202ENST00000427534 ZBTB9Q96C00 473 aa15.44■□□□□ 0.06
SPG11-202ENST00000427534 ARGLU1Q9NWB6 273 aaPredicted RBP15.44■□□□□ 0.06
SPG11-202ENST00000427534 SAMM50Q9Y512 469 aa15.44■□□□□ 0.06
SPG11-202ENST00000427534 MACROD2A1Z1Q3 448 aa15.44■□□□□ 0.06
SPG11-202ENST00000427534 H0YHG0 523 aa15.44■□□□□ 0.06
SPG11-202ENST00000427534 IFIT5Q13325 482 aaKnown RBP15.44■□□□□ 0.06
SPG11-202ENST00000427534 ARHGEF11O15085 1522 aa15.44■□□□□ 0.06
SPG11-202ENST00000427534 NAPBQ9H115 298 aa15.44■□□□□ 0.06
SPG11-202ENST00000427534 FCHSD2O94868 740 aa15.44■□□□□ 0.06
SPG11-202ENST00000427534 CCDC141Q6ZP82 1450 aa15.43■□□□□ 0.06
SPG11-202ENST00000427534 UPF3BQ9BZI7 483 aaKnown RBP15.43■□□□□ 0.06
SPG11-202ENST00000427534 TSPYL1Q9H0U9 437 aa15.43■□□□□ 0.06
SPG11-202ENST00000427534 MCM2P49736 904 aa15.43■□□□□ 0.06
SPG11-202ENST00000427534 TERF1P54274 439 aa15.43■□□□□ 0.06
SPG11-202ENST00000427534 MAGI1Q96QZ7 1491 aaPredicted RBP15.43■□□□□ 0.06
SPG11-202ENST00000427534 EIF5P55010 431 aaKnown RBP15.43■□□□□ 0.06
SPG11-202ENST00000427534 PLS1Q14651 629 aa15.43■□□□□ 0.06
SPG11-202ENST00000427534 BACH2Q9BYV9 841 aa15.43■□□□□ 0.06
SPG11-202ENST00000427534 FILIP1Q7Z7B0 1213 aa15.42■□□□□ 0.06
SPG11-202ENST00000427534 PCF11O94913 1555 aaKnown RBP15.42■□□□□ 0.06
SPG11-202ENST00000427534 MRE11P49959 708 aa15.42■□□□□ 0.06
SPG11-202ENST00000427534 BMP2KQ9NSY1 1161 aaPredicted RBP15.42■□□□□ 0.06
SPG11-202ENST00000427534 MAP3K2Q9Y2U5 619 aa15.42■□□□□ 0.06
SPG11-202ENST00000427534 RIMBP2O15034 1052 aa15.42■□□□□ 0.06
SPG11-202ENST00000427534 CCDC39Q9UFE4 941 aa15.42■□□□□ 0.06
SPG11-202ENST00000427534 IQGAP2Q13576 1575 aa15.41■□□□□ 0.06
SPG11-202ENST00000427534 SLFN5Q08AF3 891 aa15.41■□□□□ 0.06
SPG11-202ENST00000427534 HSP90AB3PQ58FF7 597 aa15.41■□□□□ 0.06
SPG11-202ENST00000427534 A0A087WZG4 1122 aa15.41■□□□□ 0.06
SPG11-202ENST00000427534 KAT6BQ8WYB5 2073 aa15.41■□□□□ 0.06
SPG11-202ENST00000427534 CTNNBL1Q8WYA6 563 aaPredicted RBP15.41■□□□□ 0.06
SPG11-202ENST00000427534 CAMSAP2Q08AD1 1489 aa15.41■□□□□ 0.06
SPG11-202ENST00000427534 HSPA2P54652 639 aa15.41■□□□□ 0.06
SPG11-202ENST00000427534 ABCC5O15440 1437 aa15.41■□□□□ 0.06
SPG11-202ENST00000427534 TMPOP42166 694 aaKnown RBP15.41■□□□□ 0.06
SPG11-202ENST00000427534 PHF8Q9UPP1 1060 aa15.4■□□□□ 0.06
SPG11-202ENST00000427534 CPLX3Q8WVH0 158 aa15.4■□□□□ 0.06
SPG11-202ENST00000427534 PUF60Q9UHX1 559 aaKnown RBP15.4■□□□□ 0.06
SPG11-202ENST00000427534 SLC39A6Q13433 755 aa15.4■□□□□ 0.06
SPG11-202ENST00000427534 KIAA1328Q86T90 577 aa15.4■□□□□ 0.06
SPG11-202ENST00000427534 MYO6Q9UM54 1294 aa15.4■□□□□ 0.06
SPG11-202ENST00000427534 GOLIM4O00461 696 aa15.4■□□□□ 0.06
SPG11-202ENST00000427534 CCDC113Q9H0I3 377 aa15.4■□□□□ 0.06
SPG11-202ENST00000427534 BRPF3Q9ULD4 1205 aa15.4■□□□□ 0.06
SPG11-202ENST00000427534 USP8P40818 1118 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms