RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 NCOA3Q9Y6Q9 1424 aa23.87■■□□□ 1.41
SNX17-202ENST00000427123 OVOS2A0A0G2JMS6 1433 aa23.86■■□□□ 1.41
SNX17-202ENST00000427123 MST1RQ04912 1400 aa23.86■■□□□ 1.41
SNX17-202ENST00000427123 HDGFL1Q5TGJ6 251 aa23.86■■□□□ 1.41
SNX17-202ENST00000427123 C16orf71Q8IYS4 520 aaPredicted RBP23.86■■□□□ 1.41
SNX17-202ENST00000427123 NECTIN2Q92692 538 aa23.86■■□□□ 1.41
SNX17-202ENST00000427123 HOXB7P09629 217 aa23.86■■□□□ 1.41
SNX17-202ENST00000427123 C1orf167Q5SNV9 1468 aa23.85■■□□□ 1.41
SNX17-202ENST00000427123 PLEKHO1Q53GL0 409 aaPredicted RBP23.85■■□□□ 1.41
SNX17-202ENST00000427123 AKAP4Q5JQC9 854 aa23.85■■□□□ 1.41
SNX17-202ENST00000427123 AMOTQ4VCS5 1084 aa23.84■■□□□ 1.41
SNX17-202ENST00000427123 PROSER2Q86WR7 435 aaPredicted RBP23.84■■□□□ 1.41
SNX17-202ENST00000427123 ALS2Q96Q42 1657 aa23.84■■□□□ 1.41
SNX17-202ENST00000427123 SMARCA5O60264 1052 aaPredicted RBP23.84■■□□□ 1.41
SNX17-202ENST00000427123 XPCQ01831 940 aaPredicted RBP23.84■■□□□ 1.41
SNX17-202ENST00000427123 OTUD7AQ8TE49 926 aaPredicted RBP23.84■■□□□ 1.41
SNX17-202ENST00000427123 LRRC59Q96AG4 307 aaKnown RBP23.84■■□□□ 1.41
SNX17-202ENST00000427123 KIF2CQ99661 725 aa23.84■■□□□ 1.41
SNX17-202ENST00000427123 CHMP4AQ9BY43 222 aa23.84■■□□□ 1.41
SNX17-202ENST00000427123 CHMP5Q9NZZ3 219 aa23.84■■□□□ 1.41
SNX17-202ENST00000427123 ZNF530Q6P9A1 599 aaPredicted RBP23.83■■□□□ 1.41
SNX17-202ENST00000427123 APBB1O00213 710 aa23.82■■□□□ 1.4
SNX17-202ENST00000427123 EIF4A1P60842 406 aaKnown RBP23.82■■□□□ 1.4
SNX17-202ENST00000427123 SPRYD3Q8NCJ5 442 aa23.82■■□□□ 1.4
SNX17-202ENST00000427123 LMTK3Q96Q04 1460 aa23.82■■□□□ 1.4
SNX17-202ENST00000427123 LGR6Q9HBX8 967 aa23.81■■□□□ 1.4
SNX17-202ENST00000427123 PXDNQ92626 1479 aa23.81■■□□□ 1.4
SNX17-202ENST00000427123 KRT28Q7Z3Y7 464 aa23.81■■□□□ 1.4
SNX17-202ENST00000427123 BCL11AQ9H165 835 aa23.81■■□□□ 1.4
SNX17-202ENST00000427123 TEFQ10587 303 aa23.8■■□□□ 1.4
SNX17-202ENST00000427123 CASC1Q6TDU7 716 aa23.8■■□□□ 1.4
SNX17-202ENST00000427123 ANKRD24Q8TF21 1146 aa23.8■■□□□ 1.4
SNX17-202ENST00000427123 OSBPL3Q9H4L5 887 aa23.79■■□□□ 1.4
SNX17-202ENST00000427123 C19orf44Q9H6X5 657 aa23.79■■□□□ 1.4
SNX17-202ENST00000427123 TUBGCP6Q96RT7 1819 aa23.79■■□□□ 1.4
SNX17-202ENST00000427123 SDSP20132 328 aa23.79■■□□□ 1.4
SNX17-202ENST00000427123 ATP8B2P98198 1209 aa23.79■■□□□ 1.4
SNX17-202ENST00000427123 LMOD2Q6P5Q4 547 aa23.79■■□□□ 1.4
SNX17-202ENST00000427123 SIPA1L3O60292 1781 aaPredicted RBP23.78■■□□□ 1.4
SNX17-202ENST00000427123 RGPD5Q99666 1765 aa23.78■■□□□ 1.4
SNX17-202ENST00000427123 ADAMTS7Q9UKP4 1686 aa23.78■■□□□ 1.4
SNX17-202ENST00000427123 C1orf141Q5JVX7 400 aa23.77■■□□□ 1.4
SNX17-202ENST00000427123 BTBD11A6QL63 1104 aa23.76■■□□□ 1.39
SNX17-202ENST00000427123 HSP90AB1P08238 724 aaKnown RBP23.76■■□□□ 1.39
SNX17-202ENST00000427123 PHAXQ9H814 394 aaKnown RBP23.76■■□□□ 1.39
SNX17-202ENST00000427123 IBTKQ9P2D0 1353 aaPredicted RBP23.76■■□□□ 1.39
SNX17-202ENST00000427123 LRRFIP2Q9Y608 721 aaKnown RBP23.76■■□□□ 1.39
SNX17-202ENST00000427123 DCCP43146 1447 aa23.76■■□□□ 1.39
SNX17-202ENST00000427123 RNMTO43148 476 aaKnown RBP23.76■■□□□ 1.39
SNX17-202ENST00000427123 UBTFL1P0CB47 393 aaPredicted RBP23.76■■□□□ 1.39
SNX17-202ENST00000427123 DDIT3P35638 169 aa23.76■■□□□ 1.39
SNX17-202ENST00000427123 LRRCC1Q9C099 1032 aa23.76■■□□□ 1.39
SNX17-202ENST00000427123 USP44Q9H0E7 712 aa23.76■■□□□ 1.39
SNX17-202ENST00000427123 EXOC6BQ9Y2D4 811 aa23.76■■□□□ 1.39
SNX17-202ENST00000427123 PDE1AP54750 535 aa23.75■■□□□ 1.39
SNX17-202ENST00000427123 MPRIPQ6WCQ1 1025 aa23.75■■□□□ 1.39
SNX17-202ENST00000427123 PNMA6EA0A0J9YXQ4 647 aa23.74■■□□□ 1.39
SNX17-202ENST00000427123 EIF2S2P20042 333 aaKnown RBP23.74■■□□□ 1.39
SNX17-202ENST00000427123 SALL3Q9BXA9 1300 aa23.74■■□□□ 1.39
SNX17-202ENST00000427123 SRCIN1Q9C0H9 1055 aa23.73■■□□□ 1.39
SNX17-202ENST00000427123 CHPF2Q9P2E5 772 aa23.73■■□□□ 1.39
SNX17-202ENST00000427123 CIZ1Q9ULV3 898 aaPredicted RBP23.73■■□□□ 1.39
SNX17-202ENST00000427123 STRCP1A6NGW2 1772 aa23.73■■□□□ 1.39
SNX17-202ENST00000427123 KCNQ3O43525 872 aa23.72■■□□□ 1.39
SNX17-202ENST00000427123 USP26Q9BXU7 913 aa23.72■■□□□ 1.39
SNX17-202ENST00000427123 K7ELQ4 463 aaPredicted RBP23.72■■□□□ 1.39
SNX17-202ENST00000427123 PLEKHG5O94827 1062 aa23.72■■□□□ 1.39
SNX17-202ENST00000427123 RABEP1Q15276 862 aa23.72■■□□□ 1.39
SNX17-202ENST00000427123 AXIN2Q9Y2T1 843 aa23.72■■□□□ 1.39
SNX17-202ENST00000427123 ERBB3P21860 1342 aa23.71■■□□□ 1.39
SNX17-202ENST00000427123 REC8O95072 547 aa23.7■■□□□ 1.38
SNX17-202ENST00000427123 MCM4P33991 863 aa23.7■■□□□ 1.38
SNX17-202ENST00000427123 ABCC6O95255 1503 aa23.7■■□□□ 1.38
SNX17-202ENST00000427123 CD2BP2O95400 341 aaKnown RBP23.69■■□□□ 1.38
SNX17-202ENST00000427123 ATF3P18847 181 aa23.69■■□□□ 1.38
SNX17-202ENST00000427123 SSH3Q8TE77 659 aa23.69■■□□□ 1.38
SNX17-202ENST00000427123 DNAAF4Q8WXU2 420 aa23.69■■□□□ 1.38
SNX17-202ENST00000427123 CRYBG1Q9Y4K1 1723 aa23.69■■□□□ 1.38
SNX17-202ENST00000427123 TMEM94Q12767 1356 aa23.69■■□□□ 1.38
SNX17-202ENST00000427123 MX1P20591 662 aa23.69■■□□□ 1.38
SNX17-202ENST00000427123 HEG1Q9ULI3 1381 aa23.69■■□□□ 1.38
SNX17-202ENST00000427123 RBM42Q9BTD8 480 aaKnown RBP23.68■■□□□ 1.38
SNX17-202ENST00000427123 DBF4Q9UBU7 674 aaPredicted RBP23.68■■□□□ 1.38
SNX17-202ENST00000427123 ERC2O15083 957 aa23.67■■□□□ 1.38
SNX17-202ENST00000427123 BEND3Q5T5X7 828 aa23.67■■□□□ 1.38
SNX17-202ENST00000427123 COL18A1P39060 1754 aa23.67■■□□□ 1.38
SNX17-202ENST00000427123 ADCY9O60503 1353 aa23.67■■□□□ 1.38
SNX17-202ENST00000427123 SCN11AQ9UI33 1791 aa23.67■■□□□ 1.38
SNX17-202ENST00000427123 AOX1Q06278 1338 aa23.67■■□□□ 1.38
SNX17-202ENST00000427123 POLA2Q14181 598 aa23.66■■□□□ 1.38
SNX17-202ENST00000427123 STAP2Q9UGK3 403 aa23.66■■□□□ 1.38
SNX17-202ENST00000427123 PI4KAP2A4QPH2 592 aa23.66■■□□□ 1.38
SNX17-202ENST00000427123 RAB11FIP3O75154 756 aa23.66■■□□□ 1.38
SNX17-202ENST00000427123 HSP90AA1P07900 732 aaKnown RBP23.66■■□□□ 1.38
SNX17-202ENST00000427123 PI4KAP1Q8N8J0 262 aa23.66■■□□□ 1.38
SNX17-202ENST00000427123 GIGYF1O75420 1035 aaPredicted RBP23.65■■□□□ 1.38
SNX17-202ENST00000427123 ZC3H6P61129 1189 aaKnown RBP23.64■■□□□ 1.37
SNX17-202ENST00000427123 PPP1R42Q7Z4L9 355 aa23.64■■□□□ 1.37
SNX17-202ENST00000427123 PLEKHG2Q9H7P9 1386 aa23.63■■□□□ 1.37
SNX17-202ENST00000427123 TNS3Q68CZ2 1445 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms