RNA–Protein interactions for RNA: ENST00000426962.1

LINC01238-202, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2

Gene LINC01238, Length 430 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-202ENST00000426962 MTHFSDQ2M296 383 aaKnown RBP14.47□□□□□ -0.09
LINC01238-202ENST00000426962 LINC00116Q8NCU8 138 aa14.47□□□□□ -0.09
LINC01238-202ENST00000426962 RBM42Q9BTD8 480 aaKnown RBP14.47□□□□□ -0.09
LINC01238-202ENST00000426962 FHDC1Q9C0D6 1143 aaPredicted RBP14.47□□□□□ -0.09
LINC01238-202ENST00000426962 ITPK1Q13572 414 aa14.46□□□□□ -0.09
LINC01238-202ENST00000426962 LGR6Q9HBX8 967 aa14.46□□□□□ -0.09
LINC01238-202ENST00000426962 NUDCQ9Y266 331 aa14.46□□□□□ -0.09
LINC01238-202ENST00000426962 RNMTO43148 476 aaKnown RBP14.45□□□□□ -0.1
LINC01238-202ENST00000426962 QSER1Q2KHR3 1735 aa14.45□□□□□ -0.1
LINC01238-202ENST00000426962 SLC4A9Q96Q91 983 aa14.45□□□□□ -0.1
LINC01238-202ENST00000426962 COL3A1P02461 1466 aaPredicted RBP14.44□□□□□ -0.1
LINC01238-202ENST00000426962 SSFA2P28290 1259 aa14.44□□□□□ -0.1
LINC01238-202ENST00000426962 SLC52A2Q9HAB3 445 aa14.44□□□□□ -0.1
LINC01238-202ENST00000426962 C5P01031 1676 aa14.43□□□□□ -0.1
LINC01238-202ENST00000426962 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.43□□□□□ -0.1
LINC01238-202ENST00000426962 PTCD1O75127 700 aaKnown RBP14.43□□□□□ -0.1
LINC01238-202ENST00000426962 RC3H1Q5TC82 1133 aaKnown RBP14.43□□□□□ -0.1
LINC01238-202ENST00000426962 AMIGO3Q86WK7 504 aa14.43□□□□□ -0.1
LINC01238-202ENST00000426962 GAS2L2Q8NHY3 880 aa14.43□□□□□ -0.1
LINC01238-202ENST00000426962 GNPATO15228 680 aa14.42□□□□□ -0.1
LINC01238-202ENST00000426962 PHF14O94880 888 aa14.42□□□□□ -0.1
LINC01238-202ENST00000426962 SMIM5Q71RC9 77 aa14.42□□□□□ -0.1
LINC01238-202ENST00000426962 TAF1LQ8IZX4 1826 aa14.42□□□□□ -0.1
LINC01238-202ENST00000426962 C4BP0C0L5 1744 aa14.41□□□□□ -0.1
LINC01238-202ENST00000426962 FCHSD2O94868 740 aa14.41□□□□□ -0.1
LINC01238-202ENST00000426962 MSL1Q68DK7 614 aa14.41□□□□□ -0.1
LINC01238-202ENST00000426962 RTCBQ9Y3I0 505 aaKnown RBP14.41□□□□□ -0.1
LINC01238-202ENST00000426962 MAP3K5Q99683 1374 aa14.41□□□□□ -0.1
LINC01238-202ENST00000426962 TUBGCP6Q96RT7 1819 aa14.41□□□□□ -0.1
LINC01238-202ENST00000426962 GNAT3A8MTJ3 354 aa14.4□□□□□ -0.1
LINC01238-202ENST00000426962 U2AF1L5P0DN76 240 aaPredicted RBP14.4□□□□□ -0.1
LINC01238-202ENST00000426962 PRKAR2BP31323 418 aa14.4□□□□□ -0.1
LINC01238-202ENST00000426962 U2AF1Q01081 240 aaKnown RBP eCLIP14.4□□□□□ -0.1
LINC01238-202ENST00000426962 TRAPPC3LQ5T215 181 aa14.4□□□□□ -0.1
LINC01238-202ENST00000426962 RSPH6AQ9H0K4 717 aa14.4□□□□□ -0.1
LINC01238-202ENST00000426962 RPS6KA4O75676 772 aa14.39□□□□□ -0.11
LINC01238-202ENST00000426962 KLHL34Q8N239 644 aa14.39□□□□□ -0.11
LINC01238-202ENST00000426962 PHACTR3Q96KR7 559 aa14.39□□□□□ -0.11
LINC01238-202ENST00000426962 CNTNAP4Q9C0A0 1308 aa14.39□□□□□ -0.11
LINC01238-202ENST00000426962 DDX10Q13206 875 aaKnown RBP14.38□□□□□ -0.11
LINC01238-202ENST00000426962 SLC39A6Q13433 755 aa14.38□□□□□ -0.11
LINC01238-202ENST00000426962 IL17REQ8NFR9 667 aa14.38□□□□□ -0.11
LINC01238-202ENST00000426962 COL24A1Q17RW2 1714 aa14.38□□□□□ -0.11
LINC01238-202ENST00000426962 ADRA2BP18089 450 aa14.37□□□□□ -0.11
LINC01238-202ENST00000426962 TEFQ10587 303 aa14.37□□□□□ -0.11
LINC01238-202ENST00000426962 RALBP1Q15311 655 aa14.37□□□□□ -0.11
LINC01238-202ENST00000426962 ARHGEF1Q92888 912 aaKnown RBP14.37□□□□□ -0.11
LINC01238-202ENST00000426962 SCN11AQ9UI33 1791 aa14.37□□□□□ -0.11
LINC01238-202ENST00000426962 CRKLP46109 303 aaKnown RBP14.36□□□□□ -0.11
LINC01238-202ENST00000426962 ZNF831Q5JPB2 1677 aa14.36□□□□□ -0.11
LINC01238-202ENST00000426962 UBR3Q6ZT12 1888 aa14.35□□□□□ -0.11
LINC01238-202ENST00000426962 RFC4P35249 363 aa14.35□□□□□ -0.11
LINC01238-202ENST00000426962 VSIG10Q8N0Z9 540 aa14.35□□□□□ -0.11
LINC01238-202ENST00000426962 NLGN1Q8N2Q7 840 aa14.35□□□□□ -0.11
LINC01238-202ENST00000426962 CD2APQ9Y5K6 639 aa14.35□□□□□ -0.11
LINC01238-202ENST00000426962 MRC1P22897 1456 aa14.34□□□□□ -0.11
LINC01238-202ENST00000426962 GPR162Q16538 588 aa14.34□□□□□ -0.11
LINC01238-202ENST00000426962 INTS5Q6P9B9 1019 aaKnown RBP14.34□□□□□ -0.11
LINC01238-202ENST00000426962 DNAJC10Q8IXB1 793 aa14.34□□□□□ -0.11
LINC01238-202ENST00000426962 TTC5Q8N0Z6 440 aa14.34□□□□□ -0.11
LINC01238-202ENST00000426962 NLGN2Q8NFZ4 835 aa14.34□□□□□ -0.11
LINC01238-202ENST00000426962 NEFMP07197 916 aa14.33□□□□□ -0.12
LINC01238-202ENST00000426962 CYP19A1P11511 503 aaPredicted RBP14.33□□□□□ -0.12
LINC01238-202ENST00000426962 YY1P25490 414 aa14.33□□□□□ -0.12
LINC01238-202ENST00000426962 ZEB1P37275 1124 aaPredicted RBP14.33□□□□□ -0.12
LINC01238-202ENST00000426962 ZNF790Q6PG37 636 aa14.33□□□□□ -0.12
LINC01238-202ENST00000426962 RTF1Q92541 710 aaKnown RBP14.33□□□□□ -0.12
LINC01238-202ENST00000426962 HTATSF1O43719 755 aaKnown RBP14.32□□□□□ -0.12
LINC01238-202ENST00000426962 GYS1P13807 737 aa14.32□□□□□ -0.12
LINC01238-202ENST00000426962 PNNQ9H307 717 aaKnown RBP14.32□□□□□ -0.12
LINC01238-202ENST00000426962 CCDC87Q9NVE4 849 aa14.32□□□□□ -0.12
LINC01238-202ENST00000426962 ADAMTS7Q9UKP4 1686 aa14.32□□□□□ -0.12
LINC01238-202ENST00000426962 CEMIPQ8WUJ3 1361 aa14.32□□□□□ -0.12
LINC01238-202ENST00000426962 BTBD11A6QL63 1104 aa14.31□□□□□ -0.12
LINC01238-202ENST00000426962 MMP10P09238 476 aa14.31□□□□□ -0.12
LINC01238-202ENST00000426962 TEX13AQ9BXU3 409 aaPredicted RBP14.31□□□□□ -0.12
LINC01238-202ENST00000426962 STARD3NLO95772 234 aa14.3□□□□□ -0.12
LINC01238-202ENST00000426962 PELP1Q8IZL8 1130 aaKnown RBP14.3□□□□□ -0.12
LINC01238-202ENST00000426962 ZNF496Q96IT1 587 aaPredicted RBP14.3□□□□□ -0.12
LINC01238-202ENST00000426962 COL5A3P25940 1745 aaPredicted RBP14.29□□□□□ -0.12
LINC01238-202ENST00000426962 MYH14Q7Z406 1995 aaKnown RBP14.29□□□□□ -0.12
LINC01238-202ENST00000426962 MCM10Q7L590 875 aa14.29□□□□□ -0.12
LINC01238-202ENST00000426962 FMNL2Q96PY5 1086 aa14.29□□□□□ -0.12
LINC01238-202ENST00000426962 PLEKHF1Q96S99 279 aa14.29□□□□□ -0.12
LINC01238-202ENST00000426962 GRIN3BO60391 1043 aa14.28□□□□□ -0.12
LINC01238-202ENST00000426962 ZPR1O75312 459 aa14.28□□□□□ -0.12
LINC01238-202ENST00000426962 DCTN1Q14203 1278 aa14.28□□□□□ -0.12
LINC01238-202ENST00000426962 KCPQ6ZWJ8 1503 aa14.28□□□□□ -0.12
LINC01238-202ENST00000426962 HEG1Q9ULI3 1381 aa14.28□□□□□ -0.12
LINC01238-202ENST00000426962 PARP3Q9Y6F1 533 aa14.28□□□□□ -0.12
LINC01238-202ENST00000426962 SOS1Q07889 1333 aaPredicted RBP14.27□□□□□ -0.12
LINC01238-202ENST00000426962 MYBBP1AQ9BQG0 1328 aaKnown RBP14.27□□□□□ -0.12
LINC01238-202ENST00000426962 USP42Q9H9J4 1324 aaKnown RBP14.27□□□□□ -0.12
LINC01238-202ENST00000426962 KCNQ3O43525 872 aa14.27□□□□□ -0.13
LINC01238-202ENST00000426962 TAF7Q15545 349 aaPredicted RBP14.27□□□□□ -0.13
LINC01238-202ENST00000426962 SRP68Q9UHB9 627 aaKnown RBP14.27□□□□□ -0.13
LINC01238-202ENST00000426962 ZBTB1Q9Y2K1 713 aa14.27□□□□□ -0.13
LINC01238-202ENST00000426962 VIRMAQ69YN4 1812 aaKnown RBP14.27□□□□□ -0.13
LINC01238-202ENST00000426962 TJP1Q07157 1748 aa14.27□□□□□ -0.13
LINC01238-202ENST00000426962 CICQ96RK0 1608 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms