RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 ANKLE2Q86XL3 938 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 FAM9BQ8IZU0 186 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 DCAF11Q8TEB1 546 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 SPIRE2Q8WWL2 714 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 SYMPKQ92797 1274 aaKnown RBP3.72□□□□□ -1.81
LINC00407-201ENST00000426509 FAM117AQ9C073 453 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 PRDM9Q9NQV7 894 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 PCDHGC3Q9UN70 934 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 LRPPRCP42704 1394 aaKnown RBP3.72□□□□□ -1.81
LINC00407-201ENST00000426509 CEP152O94986 1710 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 SPHKAPQ2M3C7 1700 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 MED14O60244 1454 aa3.72□□□□□ -1.81
LINC00407-201ENST00000426509 PLEKHG3A1L390 1219 aa3.71□□□□□ -1.82
LINC00407-201ENST00000426509 GFRA3O60609 400 aa3.71□□□□□ -1.82
LINC00407-201ENST00000426509 NDUFV2P19404 249 aa3.71□□□□□ -1.82
LINC00407-201ENST00000426509 USP46P62068 366 aa3.71□□□□□ -1.82
LINC00407-201ENST00000426509 PNISRQ8TF01 805 aaKnown RBP3.71□□□□□ -1.82
LINC00407-201ENST00000426509 TESK2Q96S53 571 aa3.71□□□□□ -1.82
LINC00407-201ENST00000426509 POLR3GLQ9BT43 218 aa3.71□□□□□ -1.82
LINC00407-201ENST00000426509 BRD4O60885 1362 aaPredicted RBP3.71□□□□□ -1.82
LINC00407-201ENST00000426509 PARD3Q8TEW0 1356 aa3.71□□□□□ -1.82
LINC00407-201ENST00000426509 TNRQ92752 1358 aa3.71□□□□□ -1.82
LINC00407-201ENST00000426509 SPAG9O60271 1321 aaKnown RBP3.7□□□□□ -1.82
LINC00407-201ENST00000426509 RNF123Q5XPI4 1314 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 MOXD2PA6NHM9 499 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 PER1O15534 1290 aaPredicted RBP3.7□□□□□ -1.82
LINC00407-201ENST00000426509 LTKP29376 864 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 MMP16P51512 607 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 IRX6P78412 446 aaPredicted RBP3.7□□□□□ -1.82
LINC00407-201ENST00000426509 RALBP1Q15311 655 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 RGL3Q3MIN7 710 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 GRIPAP1Q4V328 841 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 MSS51Q4VC12 460 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 ERICH6BQ5W0A0 696 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 ZNF772Q68DY9 489 aaPredicted RBP3.7□□□□□ -1.82
LINC00407-201ENST00000426509 TRAF7Q6Q0C0 670 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 ZNF598Q86UK7 904 aaKnown RBP3.7□□□□□ -1.82
LINC00407-201ENST00000426509 USB1Q9BQ65 265 aaKnown RBP3.7□□□□□ -1.82
LINC00407-201ENST00000426509 BEGAINQ9BUH8 593 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 KTN1Q86UP2 1357 aaKnown RBP3.7□□□□□ -1.82
LINC00407-201ENST00000426509 JCADQ9P266 1359 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 CLTCQ00610 1675 aaKnown RBP3.7□□□□□ -1.82
LINC00407-201ENST00000426509 KIDINS220Q9ULH0 1771 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 KIAA1210Q9ULL0 1709 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 EFCAB6Q5THR3 1501 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 LMTK2Q8IWU2 1503 aa3.7□□□□□ -1.82
LINC00407-201ENST00000426509 MYBBP1AQ9BQG0 1328 aaKnown RBP3.7□□□□□ -1.82
LINC00407-201ENST00000426509 MROH2AA6NES4 1674 aa3.69□□□□□ -1.82
LINC00407-201ENST00000426509 UGGT1Q9NYU2 1555 aa3.69□□□□□ -1.82
LINC00407-201ENST00000426509 MYOM2P54296 1465 aa3.69□□□□□ -1.82
LINC00407-201ENST00000426509 NRXN1Q9ULB1 1477 aa3.69□□□□□ -1.82
LINC00407-201ENST00000426509 TMEM94Q12767 1356 aa3.69□□□□□ -1.82
LINC00407-201ENST00000426509 NUTM2BA6NNL0 878 aaPredicted RBP3.69□□□□□ -1.82
LINC00407-201ENST00000426509 NUTM2EB1AL46 878 aaPredicted RBP3.69□□□□□ -1.82
LINC00407-201ENST00000426509 GDF9O60383 454 aa3.69□□□□□ -1.82
LINC00407-201ENST00000426509 DXOO77932 396 aaKnown RBP3.69□□□□□ -1.82
LINC00407-201ENST00000426509 FDX1P10109 184 aa3.69□□□□□ -1.82
LINC00407-201ENST00000426509 Q3C1V9 767 aa3.69□□□□□ -1.82
LINC00407-201ENST00000426509 MEX3CQ5U5Q3 659 aaKnown RBP3.69□□□□□ -1.82
LINC00407-201ENST00000426509 NUTM2DQ5VT03 806 aaPredicted RBP3.69□□□□□ -1.82
LINC00407-201ENST00000426509 NUTM1Q86Y26 1132 aa3.69□□□□□ -1.82
LINC00407-201ENST00000426509 NUTM2AQ8IVF1 878 aaPredicted RBP3.69□□□□□ -1.82
LINC00407-201ENST00000426509 IL27Q8NEV9 243 aa3.69□□□□□ -1.82
LINC00407-201ENST00000426509 NUDCQ9Y266 331 aa3.69□□□□□ -1.82
LINC00407-201ENST00000426509 FCF1Q9Y324 198 aaKnown RBP3.69□□□□□ -1.82
LINC00407-201ENST00000426509 IFT172Q9UG01 1749 aa3.69□□□□□ -1.82
LINC00407-201ENST00000426509 BLMP54132 1417 aaPredicted RBP3.69□□□□□ -1.82
LINC00407-201ENST00000426509 AFF2P51816 1311 aa3.69□□□□□ -1.82
LINC00407-201ENST00000426509 ROBO1Q9Y6N7 1651 aa3.68□□□□□ -1.82
LINC00407-201ENST00000426509 SYNMO15061 1565 aa3.68□□□□□ -1.82
LINC00407-201ENST00000426509 SCAF11Q99590 1463 aaKnown RBP3.68□□□□□ -1.82
LINC00407-201ENST00000426509 CDK12Q9NYV4 1490 aaPredicted RBP3.68□□□□□ -1.82
LINC00407-201ENST00000426509 INSRP06213 1382 aa3.68□□□□□ -1.82
LINC00407-201ENST00000426509 DEFB132Q7Z7B7 95 aa3.68□□□□□ -1.82
LINC00407-201ENST00000426509 NLRP13Q86W25 1043 aa3.68□□□□□ -1.82
LINC00407-201ENST00000426509 THEMISQ8N1K5 641 aaPredicted RBP3.68□□□□□ -1.82
LINC00407-201ENST00000426509 TBC1D2Q9BYX2 928 aa3.68□□□□□ -1.82
LINC00407-201ENST00000426509 PPP4R2Q9NY27 417 aa3.68□□□□□ -1.82
LINC00407-201ENST00000426509 PKD2L1Q9P0L9 805 aa3.68□□□□□ -1.82
LINC00407-201ENST00000426509 PCDHB15Q9Y5E8 787 aa3.68□□□□□ -1.82
LINC00407-201ENST00000426509 ADGRB3O60242 1522 aa3.68□□□□□ -1.82
LINC00407-201ENST00000426509 MYOM1P52179 1685 aa3.68□□□□□ -1.82
LINC00407-201ENST00000426509 XIRP1Q702N8 1843 aaKnown RBP3.67□□□□□ -1.82
LINC00407-201ENST00000426509 KANK1Q14678 1352 aa3.67□□□□□ -1.82
LINC00407-201ENST00000426509 NRG2O14511 850 aaPredicted RBP3.67□□□□□ -1.82
LINC00407-201ENST00000426509 KIF3BO15066 747 aa3.67□□□□□ -1.82
LINC00407-201ENST00000426509 SPTLC1O15269 473 aa3.67□□□□□ -1.82
LINC00407-201ENST00000426509 RPIAP49247 311 aa3.67□□□□□ -1.82
LINC00407-201ENST00000426509 TMF1P82094 1093 aa3.67□□□□□ -1.82
LINC00407-201ENST00000426509 CNGB1Q14028 1251 aaPredicted RBP3.67□□□□□ -1.82
LINC00407-201ENST00000426509 TMEM132AQ24JP5 1023 aa3.67□□□□□ -1.82
LINC00407-201ENST00000426509 ZNF697Q5TEC3 545 aa3.67□□□□□ -1.82
LINC00407-201ENST00000426509 PTCRAQ6ISU1 281 aaPredicted RBP3.67□□□□□ -1.82
LINC00407-201ENST00000426509 TMC1Q8TDI8 760 aa3.67□□□□□ -1.82
LINC00407-201ENST00000426509 DDRGK1Q96HY6 314 aa3.67□□□□□ -1.82
LINC00407-201ENST00000426509 QTRT2Q9H974 415 aaKnown RBP3.67□□□□□ -1.82
LINC00407-201ENST00000426509 PANK3Q9H999 370 aa3.67□□□□□ -1.82
LINC00407-201ENST00000426509 PDZRN3Q9UPQ7 1066 aa3.67□□□□□ -1.82
LINC00407-201ENST00000426509 RBM19Q9Y4C8 960 aaKnown RBP3.67□□□□□ -1.82
LINC00407-201ENST00000426509 SPATA31A6Q5VVP1 1343 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms