RNA–Protein interactions for RNA: ENST00000425141.5

SLC4A3-207, Transcript of solute carrier family 4 member 3, humanhuman

TSL 1 (best)

Gene SLC4A3, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-207ENST00000425141 RASSF8Q8NHQ8 419 aa13.55□□□□□ -0.24
SLC4A3-207ENST00000425141 LMTK2Q8IWU2 1503 aa13.54□□□□□ -0.24
SLC4A3-207ENST00000425141 PDCL3Q9H2J4 239 aa13.54□□□□□ -0.24
SLC4A3-207ENST00000425141 LRRFIP2Q9Y608 721 aaKnown RBP13.54□□□□□ -0.24
SLC4A3-207ENST00000425141 ADGRB3O60242 1522 aa13.54□□□□□ -0.24
SLC4A3-207ENST00000425141 A2ML1A8K2U0 1454 aa13.54□□□□□ -0.24
SLC4A3-207ENST00000425141 ROBO2Q9HCK4 1378 aa13.54□□□□□ -0.24
SLC4A3-207ENST00000425141 JAKMIP1Q96N16 626 aaKnown RBP13.54□□□□□ -0.24
SLC4A3-207ENST00000425141 KAT6BQ8WYB5 2073 aa13.53□□□□□ -0.24
SLC4A3-207ENST00000425141 CCDC30Q5VVM6 783 aa13.53□□□□□ -0.24
SLC4A3-207ENST00000425141 CCDC8Q9H0W5 538 aaPredicted RBP13.53□□□□□ -0.24
SLC4A3-207ENST00000425141 TFIP11Q9UBB9 837 aaKnown RBP13.53□□□□□ -0.24
SLC4A3-207ENST00000425141 USP25Q9UHP3 1055 aa13.53□□□□□ -0.24
SLC4A3-207ENST00000425141 MAP3K19Q56UN5 1328 aa13.53□□□□□ -0.24
SLC4A3-207ENST00000425141 CPLX1O14810 134 aa13.53□□□□□ -0.24
SLC4A3-207ENST00000425141 CT47B1P0C2W7 299 aaPredicted RBP13.53□□□□□ -0.24
SLC4A3-207ENST00000425141 GUCY1B3Q02153 619 aa13.53□□□□□ -0.24
SLC4A3-207ENST00000425141 TTLL5Q6EMB2 1281 aa13.53□□□□□ -0.24
SLC4A3-207ENST00000425141 RUFY2Q8WXA3 655 aa13.53□□□□□ -0.24
SLC4A3-207ENST00000425141 GNAI3P08754 354 aa13.52□□□□□ -0.24
SLC4A3-207ENST00000425141 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.52□□□□□ -0.24
SLC4A3-207ENST00000425141 ATP6V1DQ9Y5K8 247 aa13.52□□□□□ -0.24
SLC4A3-207ENST00000425141 RAB11FIP4Q86YS3 637 aa13.52□□□□□ -0.25
SLC4A3-207ENST00000425141 FAM177A1Q8N128 213 aaPredicted RBP13.52□□□□□ -0.25
SLC4A3-207ENST00000425141 SDF4Q9BRK5 362 aa13.52□□□□□ -0.25
SLC4A3-207ENST00000425141 BOLA2Q9H3K6 86 aa13.52□□□□□ -0.25
SLC4A3-207ENST00000425141 TSPY26PQ9H489 355 aa13.52□□□□□ -0.25
SLC4A3-207ENST00000425141 STRN4Q9NRL3 753 aa13.52□□□□□ -0.25
SLC4A3-207ENST00000425141 BLMP54132 1417 aaPredicted RBP13.52□□□□□ -0.25
SLC4A3-207ENST00000425141 MPRIPQ6WCQ1 1025 aa13.52□□□□□ -0.25
SLC4A3-207ENST00000425141 KRT28Q7Z3Y7 464 aa13.52□□□□□ -0.25
SLC4A3-207ENST00000425141 PRR36Q9H6K5 1346 aa13.52□□□□□ -0.25
SLC4A3-207ENST00000425141 UQCRHLA0A096LP55 91 aa13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 BAG4O95429 457 aaKnown RBP13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 UQCRHP07919 91 aa13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 CASTP20810 708 aaKnown RBP13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 TAF7Q15545 349 aaPredicted RBP13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 PLEKHO1Q53GL0 409 aaPredicted RBP13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 AACSQ86V21 672 aa13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 HOMER1Q86YM7 354 aa13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 CKAP2LQ8IYA6 745 aa13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 ORAI2Q96SN7 254 aa13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 CPA1P15085 419 aa13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 FILIP1Q7Z7B0 1213 aa13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 FRMPD1Q5SYB0 1578 aa13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 GTF2E1P29083 439 aaPredicted RBP13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 PRPF40BQ6NWY9 871 aaKnown RBP13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 KCNH5Q8NCM2 988 aa13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 SYNMO15061 1565 aa13.51□□□□□ -0.25
SLC4A3-207ENST00000425141 SDSP20132 328 aa13.5□□□□□ -0.25
SLC4A3-207ENST00000425141 SKIDA1Q1XH10 827 aa13.5□□□□□ -0.25
SLC4A3-207ENST00000425141 SASS6Q6UVJ0 657 aa13.5□□□□□ -0.25
SLC4A3-207ENST00000425141 SRCIN1Q9C0H9 1055 aa13.5□□□□□ -0.25
SLC4A3-207ENST00000425141 PRDM11Q9NQV5 511 aa13.5□□□□□ -0.25
SLC4A3-207ENST00000425141 EDC4Q6P2E9 1401 aaKnown RBP13.5□□□□□ -0.25
SLC4A3-207ENST00000425141 ZNF771Q7L3S4 317 aaPredicted RBP13.5□□□□□ -0.25
SLC4A3-207ENST00000425141 CNTROBQ8N137 903 aa13.5□□□□□ -0.25
SLC4A3-207ENST00000425141 TTC21AQ8NDW8 1320 aa13.5□□□□□ -0.25
SLC4A3-207ENST00000425141 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
SLC4A3-207ENST00000425141 GNAT3A8MTJ3 354 aa13.49□□□□□ -0.25
SLC4A3-207ENST00000425141 LARP1BQ659C4 914 aaKnown RBP13.49□□□□□ -0.25
SLC4A3-207ENST00000425141 DIP2BQ9P265 1576 aa13.49□□□□□ -0.25
SLC4A3-207ENST00000425141 ZFYVE9O95405 1425 aa13.49□□□□□ -0.25
SLC4A3-207ENST00000425141 HTATSF1O43719 755 aaKnown RBP13.49□□□□□ -0.25
SLC4A3-207ENST00000425141 IL13P35225 146 aa13.49□□□□□ -0.25
SLC4A3-207ENST00000425141 CCDC173Q0VFZ6 552 aa13.49□□□□□ -0.25
SLC4A3-207ENST00000425141 DNAJC5Q9H3Z4 198 aa13.49□□□□□ -0.25
SLC4A3-207ENST00000425141 ZHX1Q9UKY1 873 aaPredicted RBP13.49□□□□□ -0.25
SLC4A3-207ENST00000425141 MX1P20591 662 aa13.48□□□□□ -0.25
SLC4A3-207ENST00000425141 CSPP1Q1MSJ5 1256 aa13.48□□□□□ -0.25
SLC4A3-207ENST00000425141 NECAB1Q8N987 351 aa13.48□□□□□ -0.25
SLC4A3-207ENST00000425141 TRIM35Q9UPQ4 493 aa13.48□□□□□ -0.25
SLC4A3-207ENST00000425141 CAMSAP1Q5T5Y3 1602 aa13.48□□□□□ -0.25
SLC4A3-207ENST00000425141 CHRNA2Q15822 529 aa13.48□□□□□ -0.25
SLC4A3-207ENST00000425141 KDM2BQ8NHM5 1336 aa13.48□□□□□ -0.25
SLC4A3-207ENST00000425141 RAD21O60216 631 aa13.48□□□□□ -0.25
SLC4A3-207ENST00000425141 PTCD1O75127 700 aaKnown RBP13.48□□□□□ -0.25
SLC4A3-207ENST00000425141 CLSTN1O94985 981 aa13.47□□□□□ -0.25
SLC4A3-207ENST00000425141 AAMPQ13685 434 aa13.47□□□□□ -0.25
SLC4A3-207ENST00000425141 CABLES1Q8TDN4 633 aa13.47□□□□□ -0.25
SLC4A3-207ENST00000425141 EYA1Q99502 592 aa13.47□□□□□ -0.25
SLC4A3-207ENST00000425141 LRRC2Q9BYS8 371 aa13.47□□□□□ -0.25
SLC4A3-207ENST00000425141 PLEKHG3A1L390 1219 aa13.47□□□□□ -0.25
SLC4A3-207ENST00000425141 RRP12Q5JTH9 1297 aaKnown RBP13.47□□□□□ -0.25
SLC4A3-207ENST00000425141 LRRC59Q96AG4 307 aaKnown RBP13.47□□□□□ -0.25
SLC4A3-207ENST00000425141 GLI2P10070 1586 aa13.47□□□□□ -0.25
SLC4A3-207ENST00000425141 IGSF3O75054 1194 aa13.46□□□□□ -0.25
SLC4A3-207ENST00000425141 NCBP3Q53F19 620 aaKnown RBP13.46□□□□□ -0.25
SLC4A3-207ENST00000425141 TOM1L2Q6ZVM7 507 aa13.46□□□□□ -0.25
SLC4A3-207ENST00000425141 PLEKHG1Q9ULL1 1385 aa13.46□□□□□ -0.25
SLC4A3-207ENST00000425141 ZMYM4Q5VZL5 1548 aa13.46□□□□□ -0.25
SLC4A3-207ENST00000425141 HCLS1P14317 486 aaPredicted RBP13.46□□□□□ -0.25
SLC4A3-207ENST00000425141 FKBP4Q02790 459 aaKnown RBP eCLIP13.46□□□□□ -0.25
SLC4A3-207ENST00000425141 NFXL1Q6ZNB6 911 aa13.46□□□□□ -0.25
SLC4A3-207ENST00000425141 CCDC82Q8N4S0 544 aa13.46□□□□□ -0.25
SLC4A3-207ENST00000425141 TATP17735 454 aaPredicted RBP13.46□□□□□ -0.26
SLC4A3-207ENST00000425141 NUCB1Q02818 461 aa13.46□□□□□ -0.26
SLC4A3-207ENST00000425141 VWDEQ8N2E2 1590 aa13.46□□□□□ -0.26
SLC4A3-207ENST00000425141 MTHFSDQ2M296 383 aaKnown RBP13.45□□□□□ -0.26
SLC4A3-207ENST00000425141 RNF20Q5VTR2 975 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms