RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 SLC27A3Q5K4L6 730 aa19.56■□□□□ 0.72
TMEM248-204ENST00000424964 NBPF14Q5TI25 921 aa19.56■□□□□ 0.72
TMEM248-204ENST00000424964 MCM10Q7L590 875 aa19.56■□□□□ 0.72
TMEM248-204ENST00000424964 DLG5Q8TDM6 1919 aa19.56■□□□□ 0.72
TMEM248-204ENST00000424964 TMPOP42166 694 aaKnown RBP19.55■□□□□ 0.72
TMEM248-204ENST00000424964 KCNQ4P56696 695 aa19.55■□□□□ 0.72
TMEM248-204ENST00000424964 RIPK4P57078 832 aa19.55■□□□□ 0.72
TMEM248-204ENST00000424964 DCTN1Q14203 1278 aa19.55■□□□□ 0.72
TMEM248-204ENST00000424964 NEUROD2Q15784 382 aa19.55■□□□□ 0.72
TMEM248-204ENST00000424964 CCNL1Q9UK58 526 aaPredicted RBP19.55■□□□□ 0.72
TMEM248-204ENST00000424964 NUP188Q5SRE5 1749 aa19.54■□□□□ 0.72
TMEM248-204ENST00000424964 LRRC4BQ9NT99 713 aa19.54■□□□□ 0.72
TMEM248-204ENST00000424964 RRP7AQ9Y3A4 280 aaKnown RBP19.54■□□□□ 0.72
TMEM248-204ENST00000424964 ADAMTS7Q9UKP4 1686 aa19.54■□□□□ 0.72
TMEM248-204ENST00000424964 LY75O60449 1722 aa19.54■□□□□ 0.72
TMEM248-204ENST00000424964 FAM9BQ8IZU0 186 aa19.53■□□□□ 0.72
TMEM248-204ENST00000424964 RBM42Q9BTD8 480 aaKnown RBP19.53■□□□□ 0.72
TMEM248-204ENST00000424964 LOC102724428A0A0B4J2F2 783 aa19.52■□□□□ 0.72
TMEM248-204ENST00000424964 SIK1P57059 783 aa19.52■□□□□ 0.72
TMEM248-204ENST00000424964 CEMIPQ8WUJ3 1361 aa19.52■□□□□ 0.72
TMEM248-204ENST00000424964 MRC1P22897 1456 aa19.52■□□□□ 0.72
TMEM248-204ENST00000424964 APAF1O14727 1248 aa19.51■□□□□ 0.71
TMEM248-204ENST00000424964 PTCD1O75127 700 aaKnown RBP19.51■□□□□ 0.71
TMEM248-204ENST00000424964 SLC39A6Q13433 755 aa19.51■□□□□ 0.71
TMEM248-204ENST00000424964 LMOD3Q0VAK6 560 aa19.5■□□□□ 0.71
TMEM248-204ENST00000424964 STK32BQ9NY57 414 aa19.5■□□□□ 0.71
TMEM248-204ENST00000424964 PSDA5PKW4 1024 aaPredicted RBP19.49■□□□□ 0.71
TMEM248-204ENST00000424964 BTBD11A6QL63 1104 aa19.49■□□□□ 0.71
TMEM248-204ENST00000424964 CCER2I3L3R5 266 aa19.49■□□□□ 0.71
TMEM248-204ENST00000424964 ATP6V1AP38606 617 aa19.49■□□□□ 0.71
TMEM248-204ENST00000424964 R3HDM1Q15032 1099 aaKnown RBP19.49■□□□□ 0.71
TMEM248-204ENST00000424964 THUMPD2Q9BTF0 503 aaKnown RBP19.49■□□□□ 0.71
TMEM248-204ENST00000424964 ANO8Q9HCE9 1232 aaPredicted RBP19.49■□□□□ 0.71
TMEM248-204ENST00000424964 HMGB2P26583 209 aaKnown RBP19.48■□□□□ 0.71
TMEM248-204ENST00000424964 TTC5Q8N0Z6 440 aa19.48■□□□□ 0.71
TMEM248-204ENST00000424964 MIER1Q8N108 512 aa19.48■□□□□ 0.71
TMEM248-204ENST00000424964 TAF7Q15545 349 aaPredicted RBP19.47■□□□□ 0.71
TMEM248-204ENST00000424964 SIPA1L3O60292 1781 aaPredicted RBP19.47■□□□□ 0.71
TMEM248-204ENST00000424964 SLC15A2Q16348 729 aa19.46■□□□□ 0.71
TMEM248-204ENST00000424964 SENP3-EIF4A1A0A087X0R7 540 aa19.45■□□□□ 0.7
TMEM248-204ENST00000424964 ITPK1Q13572 414 aa19.45■□□□□ 0.7
TMEM248-204ENST00000424964 ZNF790Q6PG37 636 aa19.45■□□□□ 0.7
TMEM248-204ENST00000424964 SLC4A9Q96Q91 983 aa19.45■□□□□ 0.7
TMEM248-204ENST00000424964 TRIM35Q9UPQ4 493 aa19.45■□□□□ 0.7
TMEM248-204ENST00000424964 ZNF827Q17R98 1081 aa19.44■□□□□ 0.7
TMEM248-204ENST00000424964 MIS18AQ9NYP9 233 aa19.44■□□□□ 0.7
TMEM248-204ENST00000424964 TAF1LQ8IZX4 1826 aa19.44■□□□□ 0.7
TMEM248-204ENST00000424964 PAPPAQ13219 1627 aa19.43■□□□□ 0.7
TMEM248-204ENST00000424964 C5P01031 1676 aa19.43■□□□□ 0.7
TMEM248-204ENST00000424964 KCNQ3O43525 872 aa19.43■□□□□ 0.7
TMEM248-204ENST00000424964 LINC00116Q8NCU8 138 aa19.43■□□□□ 0.7
TMEM248-204ENST00000424964 AKT1S1Q96B36 256 aa19.43■□□□□ 0.7
TMEM248-204ENST00000424964 TFCP2L1Q9NZI6 479 aa19.43■□□□□ 0.7
TMEM248-204ENST00000424964 AK7Q96M32 723 aa19.42■□□□□ 0.7
TMEM248-204ENST00000424964 ZNF496Q96IT1 587 aaPredicted RBP19.41■□□□□ 0.7
TMEM248-204ENST00000424964 FMNL2Q96PY5 1086 aa19.41■□□□□ 0.7
TMEM248-204ENST00000424964 KCPQ6ZWJ8 1503 aa19.41■□□□□ 0.7
TMEM248-204ENST00000424964 DNAJC10Q8IXB1 793 aa19.4■□□□□ 0.7
TMEM248-204ENST00000424964 LAS1LQ9Y4W2 734 aaKnown RBP19.4■□□□□ 0.7
TMEM248-204ENST00000424964 ZNF831Q5JPB2 1677 aa19.4■□□□□ 0.7
TMEM248-204ENST00000424964 VSIG10Q8N0Z9 540 aa19.39■□□□□ 0.69
TMEM248-204ENST00000424964 TSPYL4Q9UJ04 414 aa19.39■□□□□ 0.69
TMEM248-204ENST00000424964 SALL2Q9Y467 1007 aaPredicted RBP19.39■□□□□ 0.69
TMEM248-204ENST00000424964 C4BP0C0L5 1744 aa19.39■□□□□ 0.69
TMEM248-204ENST00000424964 UBR2Q8IWV8 1755 aa19.39■□□□□ 0.69
TMEM248-204ENST00000424964 HEG1Q9ULI3 1381 aa19.38■□□□□ 0.69
TMEM248-204ENST00000424964 GNPATO15228 680 aa19.37■□□□□ 0.69
TMEM248-204ENST00000424964 CALD1Q05682 793 aaKnown RBP19.37■□□□□ 0.69
TMEM248-204ENST00000424964 MSH5O43196 834 aa19.36■□□□□ 0.69
TMEM248-204ENST00000424964 CRKLP46109 303 aaKnown RBP19.36■□□□□ 0.69
TMEM248-204ENST00000424964 RC3H1Q5TC82 1133 aaKnown RBP19.36■□□□□ 0.69
TMEM248-204ENST00000424964 TEX13AQ9BXU3 409 aaPredicted RBP19.36■□□□□ 0.69
TMEM248-204ENST00000424964 PDGFDQ9GZP0 370 aaPredicted RBP19.36■□□□□ 0.69
TMEM248-204ENST00000424964 BABAM1Q9NWV8 329 aa19.36■□□□□ 0.69
TMEM248-204ENST00000424964 TJP1Q07157 1748 aa19.36■□□□□ 0.69
TMEM248-204ENST00000424964 PNPLA7Q6ZV29 1317 aa19.35■□□□□ 0.69
TMEM248-204ENST00000424964 CNTNAP4Q9C0A0 1308 aa19.35■□□□□ 0.69
TMEM248-204ENST00000424964 PHF14O94880 888 aa19.35■□□□□ 0.69
TMEM248-204ENST00000424964 STARD3NLO95772 234 aa19.35■□□□□ 0.69
TMEM248-204ENST00000424964 CYP19A1P11511 503 aaPredicted RBP19.35■□□□□ 0.69
TMEM248-204ENST00000424964 CCDC27Q2M243 656 aa19.35■□□□□ 0.69
TMEM248-204ENST00000424964 TUBGCP6Q96RT7 1819 aa19.35■□□□□ 0.69
TMEM248-204ENST00000424964 KDM3BQ7LBC6 1761 aa19.34■□□□□ 0.69
TMEM248-204ENST00000424964 COL5A3P25940 1745 aaPredicted RBP19.34■□□□□ 0.69
TMEM248-204ENST00000424964 SNRPA1P09661 255 aaKnown RBP19.34■□□□□ 0.69
TMEM248-204ENST00000424964 SMIM5Q71RC9 77 aa19.34■□□□□ 0.69
TMEM248-204ENST00000424964 WWC1Q8IX03 1113 aa19.34■□□□□ 0.69
TMEM248-204ENST00000424964 FLAD1Q8NFF5 587 aa19.34■□□□□ 0.69
TMEM248-204ENST00000424964 RTCBQ9Y3I0 505 aaKnown RBP19.34■□□□□ 0.69
TMEM248-204ENST00000424964 MYH14Q7Z406 1995 aaKnown RBP19.33■□□□□ 0.69
TMEM248-204ENST00000424964 CHL1O00533 1208 aa19.33■□□□□ 0.68
TMEM248-204ENST00000424964 EIF4A1P60842 406 aaKnown RBP19.33■□□□□ 0.68
TMEM248-204ENST00000424964 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.68
TMEM248-204ENST00000424964 COL23A1Q86Y22 540 aaPredicted RBP19.33■□□□□ 0.68
TMEM248-204ENST00000424964 CCDC87Q9NVE4 849 aa19.33■□□□□ 0.68
TMEM248-204ENST00000424964 QSER1Q2KHR3 1735 aa19.32■□□□□ 0.68
TMEM248-204ENST00000424964 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.32■□□□□ 0.68
TMEM248-204ENST00000424964 RPS6KA4O75676 772 aa19.32■□□□□ 0.68
TMEM248-204ENST00000424964 INTS5Q6P9B9 1019 aaKnown RBP19.32■□□□□ 0.68
TMEM248-204ENST00000424964 AMIGO3Q86WK7 504 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms