RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-204ENST00000424089 NFAT5O94916 1531 aa12.93□□□□□ -0.34
POLR1A-204ENST00000424089 TCERG1O14776 1098 aaKnown RBP12.92□□□□□ -0.34
POLR1A-204ENST00000424089 RIPK4P57078 832 aa12.92□□□□□ -0.34
POLR1A-204ENST00000424089 LMOD3Q0VAK6 560 aa12.92□□□□□ -0.34
POLR1A-204ENST00000424089 PPM1GO15355 546 aaPredicted RBP12.91□□□□□ -0.34
POLR1A-204ENST00000424089 IL2RBP14784 551 aa12.91□□□□□ -0.34
POLR1A-204ENST00000424089 HSPA6P17066 643 aa12.91□□□□□ -0.34
POLR1A-204ENST00000424089 RARSP54136 660 aaKnown RBP12.91□□□□□ -0.34
POLR1A-204ENST00000424089 ZNF428Q96B54 188 aa12.91□□□□□ -0.34
POLR1A-204ENST00000424089 NLRP2Q9NX02 1062 aa12.91□□□□□ -0.34
POLR1A-204ENST00000424089 TRIM35Q9UPQ4 493 aa12.91□□□□□ -0.34
POLR1A-204ENST00000424089 LTN1O94822 1766 aa12.9□□□□□ -0.34
POLR1A-204ENST00000424089 NFE2L2Q16236 605 aa12.9□□□□□ -0.34
POLR1A-204ENST00000424089 GPBP1L1Q9HC44 474 aaPredicted RBP12.9□□□□□ -0.34
POLR1A-204ENST00000424089 EMILIN1Q9Y6C2 1016 aa12.9□□□□□ -0.34
POLR1A-204ENST00000424089 GRIN3BO60391 1043 aa12.89□□□□□ -0.35
POLR1A-204ENST00000424089 BCAR3O75815 825 aa12.89□□□□□ -0.35
POLR1A-204ENST00000424089 PRKAR2BP31323 418 aa12.89□□□□□ -0.35
POLR1A-204ENST00000424089 ZNF827Q17R98 1081 aa12.89□□□□□ -0.35
POLR1A-204ENST00000424089 SLC27A3Q5K4L6 730 aa12.89□□□□□ -0.35
POLR1A-204ENST00000424089 C20orf194Q5TEA3 1177 aa12.89□□□□□ -0.35
POLR1A-204ENST00000424089 CENPQQ7L2Z9 268 aaPredicted RBP12.89□□□□□ -0.35
POLR1A-204ENST00000424089 ERBB3P21860 1342 aa12.88□□□□□ -0.35
POLR1A-204ENST00000424089 FANCIQ9NVI1 1328 aa12.88□□□□□ -0.35
POLR1A-204ENST00000424089 CANXP27824 592 aaKnown RBP12.88□□□□□ -0.35
POLR1A-204ENST00000424089 KIF24Q5T7B8 1368 aa12.88□□□□□ -0.35
POLR1A-204ENST00000424089 COL24A1Q17RW2 1714 aa12.88□□□□□ -0.35
POLR1A-204ENST00000424089 ZNF526Q8TF50 670 aaPredicted RBP12.87□□□□□ -0.35
POLR1A-204ENST00000424089 TFCP2L1Q9NZI6 479 aa12.87□□□□□ -0.35
POLR1A-204ENST00000424089 SHANK3Q9BYB0 1731 aa12.87□□□□□ -0.35
POLR1A-204ENST00000424089 USP54Q70EL1 1684 aa12.86□□□□□ -0.35
POLR1A-204ENST00000424089 NLGN2Q8NFZ4 835 aa12.86□□□□□ -0.35
POLR1A-204ENST00000424089 AKT1S1Q96B36 256 aa12.86□□□□□ -0.35
POLR1A-204ENST00000424089 LRRC4BQ9NT99 713 aa12.86□□□□□ -0.35
POLR1A-204ENST00000424089 ATP10DQ9P241 1426 aa12.86□□□□□ -0.35
POLR1A-204ENST00000424089 FAM208AQ9UK61 1670 aaKnown RBP12.86□□□□□ -0.35
POLR1A-204ENST00000424089 KDM2BQ8NHM5 1336 aa12.86□□□□□ -0.35
POLR1A-204ENST00000424089 TUBGCP6Q96RT7 1819 aa12.85□□□□□ -0.35
POLR1A-204ENST00000424089 CAPN15O75808 1086 aa12.85□□□□□ -0.35
POLR1A-204ENST00000424089 GNAI1P63096 354 aa12.85□□□□□ -0.35
POLR1A-204ENST00000424089 RRS1Q15050 365 aaKnown RBP12.85□□□□□ -0.35
POLR1A-204ENST00000424089 ALDH1L2Q3SY69 923 aa12.85□□□□□ -0.35
POLR1A-204ENST00000424089 ANKRD24Q8TF21 1146 aa12.85□□□□□ -0.35
POLR1A-204ENST00000424089 YBX3P16989 372 aaKnown RBP eCLIP12.84□□□□□ -0.35
POLR1A-204ENST00000424089 BRPF1P55201 1214 aaPredicted RBP12.84□□□□□ -0.35
POLR1A-204ENST00000424089 IFT57Q9NWB7 429 aa12.84□□□□□ -0.35
POLR1A-204ENST00000424089 PNPLA7Q6ZV29 1317 aa12.84□□□□□ -0.35
POLR1A-204ENST00000424089 MAP2P11137 1827 aaKnown RBP12.83□□□□□ -0.35
POLR1A-204ENST00000424089 IPO8O15397 1037 aaKnown RBP12.83□□□□□ -0.36
POLR1A-204ENST00000424089 MSH5O43196 834 aa12.83□□□□□ -0.36
POLR1A-204ENST00000424089 FBLN1P23142 703 aa12.83□□□□□ -0.36
POLR1A-204ENST00000424089 EXOSC9Q06265 439 aaKnown RBP12.83□□□□□ -0.36
POLR1A-204ENST00000424089 EIF4A2Q14240 407 aaKnown RBP12.83□□□□□ -0.36
POLR1A-204ENST00000424089 ZKSCAN2Q63HK3 967 aa12.83□□□□□ -0.36
POLR1A-204ENST00000424089 DDX54Q8TDD1 881 aaKnown RBP12.83□□□□□ -0.36
POLR1A-204ENST00000424089 SYTL4Q96C24 671 aaPredicted RBP12.83□□□□□ -0.36
POLR1A-204ENST00000424089 FLT4P35916 1363 aa12.82□□□□□ -0.36
POLR1A-204ENST00000424089 GOLGB1Q14789 3259 aaKnown RBP12.82□□□□□ -0.36
POLR1A-204ENST00000424089 HMOX1P09601 288 aa12.82□□□□□ -0.36
POLR1A-204ENST00000424089 CLUAP1Q96AJ1 413 aa12.82□□□□□ -0.36
POLR1A-204ENST00000424089 PHACTR3Q96KR7 559 aa12.82□□□□□ -0.36
POLR1A-204ENST00000424089 LY75O60449 1722 aa12.82□□□□□ -0.36
POLR1A-204ENST00000424089 DOT1LQ8TEK3 1739 aa12.82□□□□□ -0.36
POLR1A-204ENST00000424089 ZNF853P0CG23 659 aa12.81□□□□□ -0.36
POLR1A-204ENST00000424089 HMGB2P26583 209 aaKnown RBP12.81□□□□□ -0.36
POLR1A-204ENST00000424089 FRAT1Q92837 279 aaPredicted RBP12.81□□□□□ -0.36
POLR1A-204ENST00000424089 KIF16BQ96L93 1317 aa12.81□□□□□ -0.36
POLR1A-204ENST00000424089 TSR2Q969E8 191 aaKnown RBP12.8□□□□□ -0.36
POLR1A-204ENST00000424089 CFAP44Q96MT7 982 aa12.8□□□□□ -0.36
POLR1A-204ENST00000424089 CHMP4BQ9H444 224 aaKnown RBP12.8□□□□□ -0.36
POLR1A-204ENST00000424089 DZIP1LQ8IYY4 767 aaKnown RBP12.79□□□□□ -0.36
POLR1A-204ENST00000424089 ARHGAP45Q92619 1136 aa12.79□□□□□ -0.36
POLR1A-204ENST00000424089 SMC4Q9NTJ3 1288 aa12.79□□□□□ -0.36
POLR1A-204ENST00000424089 CCNL1Q9UK58 526 aaPredicted RBP12.79□□□□□ -0.36
POLR1A-204ENST00000424089 MAP3K19Q56UN5 1328 aa12.79□□□□□ -0.36
POLR1A-204ENST00000424089 AMPHP49418 695 aa12.78□□□□□ -0.36
POLR1A-204ENST00000424089 PRIM1P49642 420 aaKnown RBP12.78□□□□□ -0.36
POLR1A-204ENST00000424089 APLP1P51693 650 aa12.78□□□□□ -0.36
POLR1A-204ENST00000424089 MVPQ14764 893 aaKnown RBP12.78□□□□□ -0.36
POLR1A-204ENST00000424089 HSP90AB2PQ58FF8 381 aa12.78□□□□□ -0.36
POLR1A-204ENST00000424089 SULT6B1Q6IMI4 303 aa12.78□□□□□ -0.36
POLR1A-204ENST00000424089 PANK1Q8TE04 598 aa12.78□□□□□ -0.36
POLR1A-204ENST00000424089 LTV1Q96GA3 475 aaPredicted RBP12.78□□□□□ -0.36
POLR1A-204ENST00000424089 COG6Q9Y2V7 657 aa12.78□□□□□ -0.36
POLR1A-204ENST00000424089 RTL1A6NKG5 1358 aa12.78□□□□□ -0.36
POLR1A-204ENST00000424089 HTATSF1O43719 755 aaKnown RBP12.77□□□□□ -0.37
POLR1A-204ENST00000424089 KCNQ4P56696 695 aa12.77□□□□□ -0.37
POLR1A-204ENST00000424089 ATF7IPQ6VMQ6 1270 aa12.77□□□□□ -0.37
POLR1A-204ENST00000424089 FTSJ3Q8IY81 847 aaKnown RBP12.77□□□□□ -0.37
POLR1A-204ENST00000424089 SSH1Q8WYL5 1049 aa12.77□□□□□ -0.37
POLR1A-204ENST00000424089 IP6K1Q92551 441 aa12.77□□□□□ -0.37
POLR1A-204ENST00000424089 KDRP35968 1356 aa12.77□□□□□ -0.37
POLR1A-204ENST00000424089 RWDD1Q9H446 243 aaPredicted RBP12.76□□□□□ -0.37
POLR1A-204ENST00000424089 DDX19BQ9UMR2 479 aa12.76□□□□□ -0.37
POLR1A-204ENST00000424089 VAMP4O75379 141 aa12.75□□□□□ -0.37
POLR1A-204ENST00000424089 C5P01031 1676 aa12.75□□□□□ -0.37
POLR1A-204ENST00000424089 IGSF1Q8N6C5 1336 aa12.75□□□□□ -0.37
POLR1A-204ENST00000424089 FLAD1Q8NFF5 587 aa12.75□□□□□ -0.37
POLR1A-204ENST00000424089 GAS2L2Q8NHY3 880 aa12.75□□□□□ -0.37
POLR1A-204ENST00000424089 ZCRB1Q8TBF4 217 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms