RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 DCTN1Q14203 1278 aa22.37■■□□□ 1.17
FOXN4-203ENST00000423960 SLC52A2Q9HAB3 445 aa22.37■■□□□ 1.17
FOXN4-203ENST00000423960 NHSQ6T4R5 1651 aa22.36■■□□□ 1.17
FOXN4-203ENST00000423960 TEFQ10587 303 aa22.36■■□□□ 1.17
FOXN4-203ENST00000423960 KAT6BQ8WYB5 2073 aa22.35■■□□□ 1.17
FOXN4-203ENST00000423960 CEMIPQ8WUJ3 1361 aa22.35■■□□□ 1.17
FOXN4-203ENST00000423960 RGPD3A6NKT7 1758 aaPredicted RBP22.35■■□□□ 1.17
FOXN4-203ENST00000423960 RGPD4Q7Z3J3 1758 aa22.35■■□□□ 1.17
FOXN4-203ENST00000423960 LRP5O75197 1615 aa22.35■■□□□ 1.17
FOXN4-203ENST00000423960 DOT1LQ8TEK3 1739 aa22.34■■□□□ 1.17
FOXN4-203ENST00000423960 TRIM35Q9UPQ4 493 aa22.33■■□□□ 1.17
FOXN4-203ENST00000423960 TOGARAM1Q9Y4F4 1720 aa22.33■■□□□ 1.17
FOXN4-203ENST00000423960 SMARCC1Q92922 1105 aaPredicted RBP22.32■■□□□ 1.16
FOXN4-203ENST00000423960 SENP3-EIF4A1A0A087X0R7 540 aa22.31■■□□□ 1.16
FOXN4-203ENST00000423960 THUMPD2Q9BTF0 503 aaKnown RBP22.31■■□□□ 1.16
FOXN4-203ENST00000423960 ATG3Q9NT62 314 aa22.31■■□□□ 1.16
FOXN4-203ENST00000423960 STK32BQ9NY57 414 aa22.31■■□□□ 1.16
FOXN4-203ENST00000423960 ASAP1Q9ULH1 1129 aa22.31■■□□□ 1.16
FOXN4-203ENST00000423960 NCBP3Q53F19 620 aaKnown RBP22.3■■□□□ 1.16
FOXN4-203ENST00000423960 PDGFDQ9GZP0 370 aaPredicted RBP22.3■■□□□ 1.16
FOXN4-203ENST00000423960 SCN11AQ9UI33 1791 aa22.3■■□□□ 1.16
FOXN4-203ENST00000423960 ADAMTS7Q9UKP4 1686 aa22.3■■□□□ 1.16
FOXN4-203ENST00000423960 TAF7Q15545 349 aaPredicted RBP22.29■■□□□ 1.16
FOXN4-203ENST00000423960 SLC15A2Q16348 729 aa22.28■■□□□ 1.16
FOXN4-203ENST00000423960 LRRC4BQ9NT99 713 aa22.28■■□□□ 1.16
FOXN4-203ENST00000423960 SALL2Q9Y467 1007 aaPredicted RBP22.28■■□□□ 1.16
FOXN4-203ENST00000423960 ITGB4P16144 1822 aa22.28■■□□□ 1.16
FOXN4-203ENST00000423960 MRC1P22897 1456 aa22.28■■□□□ 1.16
FOXN4-203ENST00000423960 BTBD11A6QL63 1104 aa22.27■■□□□ 1.16
FOXN4-203ENST00000423960 CCDC27Q2M243 656 aa22.27■■□□□ 1.16
FOXN4-203ENST00000423960 NGEFQ8N5V2 710 aa22.27■■□□□ 1.16
FOXN4-203ENST00000423960 BTAF1O14981 1849 aa22.27■■□□□ 1.15
FOXN4-203ENST00000423960 DLG5Q8TDM6 1919 aa22.26■■□□□ 1.15
FOXN4-203ENST00000423960 SLC39A6Q13433 755 aa22.26■■□□□ 1.15
FOXN4-203ENST00000423960 SPON1Q9HCB6 807 aa22.26■■□□□ 1.15
FOXN4-203ENST00000423960 PALLDQ8WX93 1383 aa22.25■■□□□ 1.15
FOXN4-203ENST00000423960 KCNQ4P56696 695 aa22.25■■□□□ 1.15
FOXN4-203ENST00000423960 ZBTB7AO95365 584 aa22.24■■□□□ 1.15
FOXN4-203ENST00000423960 CALD1Q05682 793 aaKnown RBP22.24■■□□□ 1.15
FOXN4-203ENST00000423960 WWC1Q8IX03 1113 aa22.24■■□□□ 1.15
FOXN4-203ENST00000423960 PTCD1O75127 700 aaKnown RBP22.23■■□□□ 1.15
FOXN4-203ENST00000423960 SLC27A3Q5K4L6 730 aa22.23■■□□□ 1.15
FOXN4-203ENST00000423960 ZNF790Q6PG37 636 aa22.23■■□□□ 1.15
FOXN4-203ENST00000423960 TTC5Q8N0Z6 440 aa22.23■■□□□ 1.15
FOXN4-203ENST00000423960 RBM42Q9BTD8 480 aaKnown RBP22.23■■□□□ 1.15
FOXN4-203ENST00000423960 MIS18AQ9NYP9 233 aa22.23■■□□□ 1.15
FOXN4-203ENST00000423960 LOC102724428A0A0B4J2F2 783 aa22.22■■□□□ 1.15
FOXN4-203ENST00000423960 SIK1P57059 783 aa22.22■■□□□ 1.15
FOXN4-203ENST00000423960 ZNF827Q17R98 1081 aa22.22■■□□□ 1.15
FOXN4-203ENST00000423960 CCNL1Q9UK58 526 aaPredicted RBP22.22■■□□□ 1.15
FOXN4-203ENST00000423960 BABAM1Q9NWV8 329 aa22.21■■□□□ 1.15
FOXN4-203ENST00000423960 PPP1R1BQ9UD71 204 aaPredicted RBP22.21■■□□□ 1.15
FOXN4-203ENST00000423960 LAS1LQ9Y4W2 734 aaKnown RBP22.21■■□□□ 1.15
FOXN4-203ENST00000423960 KCNQ3O43525 872 aa22.2■■□□□ 1.14
FOXN4-203ENST00000423960 ATF5Q9Y2D1 282 aaPredicted RBP22.2■■□□□ 1.14
FOXN4-203ENST00000423960 VIRMAQ69YN4 1812 aaKnown RBP22.2■■□□□ 1.14
FOXN4-203ENST00000423960 ATP6V1AP38606 617 aa22.19■■□□□ 1.14
FOXN4-203ENST00000423960 TSPYL4Q9UJ04 414 aa22.19■■□□□ 1.14
FOXN4-203ENST00000423960 CHL1O00533 1208 aa22.18■■□□□ 1.14
FOXN4-203ENST00000423960 HMGB2P26583 209 aaKnown RBP22.18■■□□□ 1.14
FOXN4-203ENST00000423960 WDR63Q8IWG1 891 aa22.18■■□□□ 1.14
FOXN4-203ENST00000423960 CFAP44Q96MT7 982 aa22.18■■□□□ 1.14
FOXN4-203ENST00000423960 PAPPAQ13219 1627 aa22.17■■□□□ 1.14
FOXN4-203ENST00000423960 AKT1S1Q96B36 256 aa22.17■■□□□ 1.14
FOXN4-203ENST00000423960 ZNF496Q96IT1 587 aaPredicted RBP22.17■■□□□ 1.14
FOXN4-203ENST00000423960 FMNL2Q96PY5 1086 aa22.17■■□□□ 1.14
FOXN4-203ENST00000423960 SLC4A9Q96Q91 983 aa22.17■■□□□ 1.14
FOXN4-203ENST00000423960 IFT57Q9NWB7 429 aa22.17■■□□□ 1.14
FOXN4-203ENST00000423960 SIPA1L3O60292 1781 aaPredicted RBP22.17■■□□□ 1.14
FOXN4-203ENST00000423960 CASZ1Q86V15 1759 aa22.17■■□□□ 1.14
FOXN4-203ENST00000423960 ZNF853P0CG23 659 aa22.16■■□□□ 1.14
FOXN4-203ENST00000423960 GNAI1P63096 354 aa22.16■■□□□ 1.14
FOXN4-203ENST00000423960 IL16Q14005 1332 aa22.15■■□□□ 1.14
FOXN4-203ENST00000423960 VSIG10Q8N0Z9 540 aa22.15■■□□□ 1.14
FOXN4-203ENST00000423960 ITPK1Q13572 414 aa22.14■■□□□ 1.13
FOXN4-203ENST00000423960 PTGER2P43116 358 aa22.13■■□□□ 1.13
FOXN4-203ENST00000423960 EIF4A1P60842 406 aaKnown RBP22.13■■□□□ 1.13
FOXN4-203ENST00000423960 HNRNPUQ00839 825 aaKnown RBP eCLIP22.13■■□□□ 1.13
FOXN4-203ENST00000423960 MTFR1LQ9H019 292 aa22.13■■□□□ 1.13
FOXN4-203ENST00000423960 TFCP2L1Q9NZI6 479 aa22.13■■□□□ 1.13
FOXN4-203ENST00000423960 ZNF521Q96K83 1311 aa22.12■■□□□ 1.13
FOXN4-203ENST00000423960 KCPQ6ZWJ8 1503 aa22.12■■□□□ 1.13
FOXN4-203ENST00000423960 LY75O60449 1722 aa22.12■■□□□ 1.13
FOXN4-203ENST00000423960 MBIPQ9NS73 344 aa22.12■■□□□ 1.13
FOXN4-203ENST00000423960 HEG1Q9ULI3 1381 aa22.12■■□□□ 1.13
FOXN4-203ENST00000423960 DNAJC10Q8IXB1 793 aa22.11■■□□□ 1.13
FOXN4-203ENST00000423960 LINC00116Q8NCU8 138 aa22.11■■□□□ 1.13
FOXN4-203ENST00000423960 TEX13AQ9BXU3 409 aaPredicted RBP22.11■■□□□ 1.13
FOXN4-203ENST00000423960 PNPLA7Q6ZV29 1317 aa22.1■■□□□ 1.13
FOXN4-203ENST00000423960 SNRPA1P09661 255 aaKnown RBP22.1■■□□□ 1.13
FOXN4-203ENST00000423960 GIGYF1O75420 1035 aaPredicted RBP22.08■■□□□ 1.13
FOXN4-203ENST00000423960 STARD3NLO95772 234 aa22.08■■□□□ 1.13
FOXN4-203ENST00000423960 GOLGA2Q08379 1002 aa22.08■■□□□ 1.13
FOXN4-203ENST00000423960 CYP19A1P11511 503 aaPredicted RBP22.07■■□□□ 1.12
FOXN4-203ENST00000423960 RC3H1Q5TC82 1133 aaKnown RBP22.07■■□□□ 1.12
FOXN4-203ENST00000423960 TSR2Q969E8 191 aaKnown RBP22.07■■□□□ 1.12
FOXN4-203ENST00000423960 SPINK5Q9NQ38 1064 aaPredicted RBP22.07■■□□□ 1.12
FOXN4-203ENST00000423960 PRAMEF22A3QJZ6 481 aa22.06■■□□□ 1.12
FOXN4-203ENST00000423960 SGIP1Q9BQI5 828 aa22.06■■□□□ 1.12
FOXN4-203ENST00000423960 MYH16Q9H6N6 1097 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms