RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 FANCIQ9NVI1 1328 aa20.72■□□□□ 0.91
ABCA1-203ENST00000423487 NFATC2IPQ8NCF5 419 aa20.71■□□□□ 0.91
ABCA1-203ENST00000423487 TSR2Q969E8 191 aaKnown RBP20.71■□□□□ 0.91
ABCA1-203ENST00000423487 MBIPQ9NS73 344 aa20.71■□□□□ 0.91
ABCA1-203ENST00000423487 MRC1P22897 1456 aa20.71■□□□□ 0.91
ABCA1-203ENST00000423487 BTBD11A6QL63 1104 aa20.7■□□□□ 0.9
ABCA1-203ENST00000423487 MIS18AQ9NYP9 233 aa20.69■□□□□ 0.9
ABCA1-203ENST00000423487 KRT27Q7Z3Y8 459 aa20.68■□□□□ 0.9
ABCA1-203ENST00000423487 TMOD3Q9NYL9 352 aa20.68■□□□□ 0.9
ABCA1-203ENST00000423487 BCL9O00512 1426 aa20.66■□□□□ 0.9
ABCA1-203ENST00000423487 VIRMAQ69YN4 1812 aaKnown RBP20.66■□□□□ 0.9
ABCA1-203ENST00000423487 EXOSC9Q06265 439 aaKnown RBP20.65■□□□□ 0.9
ABCA1-203ENST00000423487 PRIM1P49642 420 aaKnown RBP20.64■□□□□ 0.9
ABCA1-203ENST00000423487 SYTL4Q96C24 671 aaPredicted RBP20.64■□□□□ 0.9
ABCA1-203ENST00000423487 TOGARAM1Q9Y4F4 1720 aa20.64■□□□□ 0.89
ABCA1-203ENST00000423487 SIPA1L3O60292 1781 aaPredicted RBP20.64■□□□□ 0.89
ABCA1-203ENST00000423487 CT47B1P0C2W7 299 aaPredicted RBP20.63■□□□□ 0.89
ABCA1-203ENST00000423487 TTC5Q8N0Z6 440 aa20.63■□□□□ 0.89
ABCA1-203ENST00000423487 ACSBG1Q96GR2 724 aa20.63■□□□□ 0.89
ABCA1-203ENST00000423487 RGS12O14924 1447 aa20.63■□□□□ 0.89
ABCA1-203ENST00000423487 ZNF790Q6PG37 636 aa20.63■□□□□ 0.89
ABCA1-203ENST00000423487 PIGBQ92521 554 aa20.63■□□□□ 0.89
ABCA1-203ENST00000423487 FAM182BQ5T319 152 aa20.62■□□□□ 0.89
ABCA1-203ENST00000423487 FAM196AQ6ZSG2 479 aa20.62■□□□□ 0.89
ABCA1-203ENST00000423487 EIF4A1P60842 406 aaKnown RBP20.61■□□□□ 0.89
ABCA1-203ENST00000423487 SLC39A6Q13433 755 aa20.61■□□□□ 0.89
ABCA1-203ENST00000423487 DOT1LQ8TEK3 1739 aa20.61■□□□□ 0.89
ABCA1-203ENST00000423487 KCNQ3O43525 872 aa20.6■□□□□ 0.89
ABCA1-203ENST00000423487 KDM3BQ7LBC6 1761 aa20.6■□□□□ 0.89
ABCA1-203ENST00000423487 C8orf58Q8NAV2 365 aa20.59■□□□□ 0.89
ABCA1-203ENST00000423487 SOS1Q07889 1333 aaPredicted RBP20.59■□□□□ 0.89
ABCA1-203ENST00000423487 TWISTNBQ3B726 338 aaPredicted RBP20.58■□□□□ 0.89
ABCA1-203ENST00000423487 BRWD3Q6RI45 1802 aa20.58■□□□□ 0.88
ABCA1-203ENST00000423487 KCNQ2O43526 872 aa20.58■□□□□ 0.88
ABCA1-203ENST00000423487 ZNF428Q96B54 188 aa20.58■□□□□ 0.88
ABCA1-203ENST00000423487 FMNL2Q96PY5 1086 aa20.58■□□□□ 0.88
ABCA1-203ENST00000423487 ITGB4P16144 1822 aa20.57■□□□□ 0.88
ABCA1-203ENST00000423487 ELL2O00472 640 aaPredicted RBP20.57■□□□□ 0.88
ABCA1-203ENST00000423487 KRT24Q2M2I5 525 aa20.57■□□□□ 0.88
ABCA1-203ENST00000423487 TSPYL6Q8N831 410 aa20.57■□□□□ 0.88
ABCA1-203ENST00000423487 RCAN3Q9UKA8 241 aa20.57■□□□□ 0.88
ABCA1-203ENST00000423487 VAMP4O75379 141 aa20.56■□□□□ 0.88
ABCA1-203ENST00000423487 HOXB7P09629 217 aa20.56■□□□□ 0.88
ABCA1-203ENST00000423487 ZNF496Q96IT1 587 aaPredicted RBP20.56■□□□□ 0.88
ABCA1-203ENST00000423487 ATG3Q9NT62 314 aa20.56■□□□□ 0.88
ABCA1-203ENST00000423487 ASAP1Q9ULH1 1129 aa20.56■□□□□ 0.88
ABCA1-203ENST00000423487 HEG1Q9ULI3 1381 aa20.55■□□□□ 0.88
ABCA1-203ENST00000423487 SMARCC1Q92922 1105 aaPredicted RBP20.55■□□□□ 0.88
ABCA1-203ENST00000423487 CHMP4AQ9BY43 222 aa20.55■□□□□ 0.88
ABCA1-203ENST00000423487 KAT6BQ8WYB5 2073 aa20.55■□□□□ 0.88
ABCA1-203ENST00000423487 GIGYF1O75420 1035 aaPredicted RBP20.53■□□□□ 0.88
ABCA1-203ENST00000423487 BCL11BQ9C0K0 894 aaPredicted RBP20.53■□□□□ 0.88
ABCA1-203ENST00000423487 PAPPAQ13219 1627 aa20.53■□□□□ 0.88
ABCA1-203ENST00000423487 NHSQ6T4R5 1651 aa20.53■□□□□ 0.88
ABCA1-203ENST00000423487 PTCD1O75127 700 aaKnown RBP20.53■□□□□ 0.88
ABCA1-203ENST00000423487 SNRPA1P09661 255 aaKnown RBP20.53■□□□□ 0.88
ABCA1-203ENST00000423487 RARSP54136 660 aaKnown RBP20.52■□□□□ 0.87
ABCA1-203ENST00000423487 KCPQ6ZWJ8 1503 aa20.51■□□□□ 0.87
ABCA1-203ENST00000423487 ALDH1L2Q3SY69 923 aa20.51■□□□□ 0.87
ABCA1-203ENST00000423487 VSIG10Q8N0Z9 540 aa20.51■□□□□ 0.87
ABCA1-203ENST00000423487 RBM42Q9BTD8 480 aaKnown RBP20.5■□□□□ 0.87
ABCA1-203ENST00000423487 PALLDQ8WX93 1383 aa20.5■□□□□ 0.87
ABCA1-203ENST00000423487 CCDC30Q5VVM6 783 aa20.49■□□□□ 0.87
ABCA1-203ENST00000423487 PTF1AQ7RTS3 328 aa20.49■□□□□ 0.87
ABCA1-203ENST00000423487 UBR2Q8IWV8 1755 aa20.49■□□□□ 0.87
ABCA1-203ENST00000423487 TRIM37O94972 964 aa20.48■□□□□ 0.87
ABCA1-203ENST00000423487 HDGFL1Q5TGJ6 251 aa20.48■□□□□ 0.87
ABCA1-203ENST00000423487 TEX13AQ9BXU3 409 aaPredicted RBP20.48■□□□□ 0.87
ABCA1-203ENST00000423487 SBF2Q86WG5 1849 aa20.48■□□□□ 0.87
ABCA1-203ENST00000423487 EIF2S2P20042 333 aaKnown RBP20.48■□□□□ 0.87
ABCA1-203ENST00000423487 SSH1Q8WYL5 1049 aa20.48■□□□□ 0.87
ABCA1-203ENST00000423487 SMC4Q9NTJ3 1288 aa20.48■□□□□ 0.87
ABCA1-203ENST00000423487 PRAMEF22A3QJZ6 481 aa20.47■□□□□ 0.87
ABCA1-203ENST00000423487 STK31Q9BXU1 1019 aa20.47■□□□□ 0.87
ABCA1-203ENST00000423487 LOC102724428A0A0B4J2F2 783 aa20.46■□□□□ 0.87
ABCA1-203ENST00000423487 SIK1P57059 783 aa20.46■□□□□ 0.87
ABCA1-203ENST00000423487 SUPT16HQ9Y5B9 1047 aaKnown RBP20.46■□□□□ 0.87
ABCA1-203ENST00000423487 BCAR3O75815 825 aa20.45■□□□□ 0.86
ABCA1-203ENST00000423487 BCL2L13Q9BXK5 485 aa20.45■□□□□ 0.86
ABCA1-203ENST00000423487 USP16Q9Y5T5 823 aa20.45■□□□□ 0.86
ABCA1-203ENST00000423487 BTAF1O14981 1849 aa20.45■□□□□ 0.86
ABCA1-203ENST00000423487 BRPF1P55201 1214 aaPredicted RBP20.44■□□□□ 0.86
ABCA1-203ENST00000423487 NECTIN2Q92692 538 aa20.44■□□□□ 0.86
ABCA1-203ENST00000423487 TCERG1O14776 1098 aaKnown RBP20.43■□□□□ 0.86
ABCA1-203ENST00000423487 ATP6V1AP38606 617 aa20.43■□□□□ 0.86
ABCA1-203ENST00000423487 MRPL50Q8N5N7 158 aaKnown RBP20.43■□□□□ 0.86
ABCA1-203ENST00000423487 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.43■□□□□ 0.86
ABCA1-203ENST00000423487 SLC4A9Q96Q91 983 aa20.43■□□□□ 0.86
ABCA1-203ENST00000423487 STARD3NLO95772 234 aa20.43■□□□□ 0.86
ABCA1-203ENST00000423487 DNAJC10Q8IXB1 793 aa20.43■□□□□ 0.86
ABCA1-203ENST00000423487 DBF4Q9UBU7 674 aaPredicted RBP20.43■□□□□ 0.86
ABCA1-203ENST00000423487 ERBB4Q15303 1308 aa20.42■□□□□ 0.86
ABCA1-203ENST00000423487 KIF16BQ96L93 1317 aa20.42■□□□□ 0.86
ABCA1-203ENST00000423487 SLC4A2P04920 1241 aa20.42■□□□□ 0.86
ABCA1-203ENST00000423487 C5P01031 1676 aa20.4■□□□□ 0.86
ABCA1-203ENST00000423487 RNF123Q5XPI4 1314 aa20.4■□□□□ 0.86
ABCA1-203ENST00000423487 RRP1P56182 461 aaKnown RBP20.4■□□□□ 0.86
ABCA1-203ENST00000423487 CHPF2Q9P2E5 772 aa20.4■□□□□ 0.86
ABCA1-203ENST00000423487 IPO8O15397 1037 aaKnown RBP20.39■□□□□ 0.85
ABCA1-203ENST00000423487 APBA3O96018 575 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms