RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 MPRIPQ6WCQ1 1025 aa24.85■■□□□ 1.57
MCF2L-214ENST00000423251 ARXQ96QS3 562 aa24.85■■□□□ 1.57
MCF2L-214ENST00000423251 ADAMTS8Q9UP79 889 aa24.85■■□□□ 1.57
MCF2L-214ENST00000423251 GNAT3A8MTJ3 354 aa24.83■■□□□ 1.57
MCF2L-214ENST00000423251 MRS2Q9HD23 443 aa24.83■■□□□ 1.57
MCF2L-214ENST00000423251 COL24A1Q17RW2 1714 aa24.83■■□□□ 1.57
MCF2L-214ENST00000423251 UTRNP46939 3433 aa24.82■■□□□ 1.56
MCF2L-214ENST00000423251 KDM6AO15550 1401 aaPredicted RBP24.82■■□□□ 1.56
MCF2L-214ENST00000423251 DIEXFQ68CQ4 756 aaKnown RBP24.82■■□□□ 1.56
MCF2L-214ENST00000423251 PNPLA7Q6ZV29 1317 aa24.82■■□□□ 1.56
MCF2L-214ENST00000423251 PIGBQ92521 554 aa24.81■■□□□ 1.56
MCF2L-214ENST00000423251 TMOD3Q9NYL9 352 aa24.81■■□□□ 1.56
MCF2L-214ENST00000423251 MAPK8IP3Q9UPT6 1336 aa24.81■■□□□ 1.56
MCF2L-214ENST00000423251 MAP3K5Q99683 1374 aa24.8■■□□□ 1.56
MCF2L-214ENST00000423251 RNMTO43148 476 aaKnown RBP24.8■■□□□ 1.56
MCF2L-214ENST00000423251 CABP4P57796 275 aa24.8■■□□□ 1.56
MCF2L-214ENST00000423251 PNISRQ8TF01 805 aaKnown RBP24.8■■□□□ 1.56
MCF2L-214ENST00000423251 LGR6Q9HBX8 967 aa24.8■■□□□ 1.56
MCF2L-214ENST00000423251 CHD4Q14839 1912 aa24.8■■□□□ 1.56
MCF2L-214ENST00000423251 TOGARAM1Q9Y4F4 1720 aa24.79■■□□□ 1.56
MCF2L-214ENST00000423251 TFCP2L1Q9NZI6 479 aa24.79■■□□□ 1.56
MCF2L-214ENST00000423251 HTATSF1O43719 755 aaKnown RBP24.78■■□□□ 1.56
MCF2L-214ENST00000423251 RUNDC1Q96C34 613 aa24.78■■□□□ 1.56
MCF2L-214ENST00000423251 ITGB4P16144 1822 aa24.77■■□□□ 1.56
MCF2L-214ENST00000423251 NFE2L2Q16236 605 aa24.77■■□□□ 1.56
MCF2L-214ENST00000423251 IL17REQ8NFR9 667 aa24.77■■□□□ 1.56
MCF2L-214ENST00000423251 CCNL1Q9UK58 526 aaPredicted RBP24.77■■□□□ 1.56
MCF2L-214ENST00000423251 C5P01031 1676 aa24.76■■□□□ 1.55
MCF2L-214ENST00000423251 KLHL34Q8N239 644 aa24.76■■□□□ 1.55
MCF2L-214ENST00000423251 NFATC2IPQ8NCF5 419 aa24.76■■□□□ 1.55
MCF2L-214ENST00000423251 SLC16A10Q8TF71 515 aa24.76■■□□□ 1.55
MCF2L-214ENST00000423251 SMARCC1Q92922 1105 aaPredicted RBP24.76■■□□□ 1.55
MCF2L-214ENST00000423251 CCDC146Q8IYE0 955 aa24.75■■□□□ 1.55
MCF2L-214ENST00000423251 RTF1Q92541 710 aaKnown RBP24.75■■□□□ 1.55
MCF2L-214ENST00000423251 SLC52A2Q9HAB3 445 aa24.75■■□□□ 1.55
MCF2L-214ENST00000423251 SCN11AQ9UI33 1791 aa24.75■■□□□ 1.55
MCF2L-214ENST00000423251 POLD1P28340 1107 aa24.74■■□□□ 1.55
MCF2L-214ENST00000423251 ADAMTS7Q9UKP4 1686 aa24.72■■□□□ 1.55
MCF2L-214ENST00000423251 CEMIPQ8WUJ3 1361 aa24.72■■□□□ 1.55
MCF2L-214ENST00000423251 TMPOP42166 694 aaKnown RBP24.72■■□□□ 1.55
MCF2L-214ENST00000423251 ATG3Q9NT62 314 aa24.72■■□□□ 1.55
MCF2L-214ENST00000423251 ASAP1Q9ULH1 1129 aa24.72■■□□□ 1.55
MCF2L-214ENST00000423251 TAF1LQ8IZX4 1826 aa24.72■■□□□ 1.55
MCF2L-214ENST00000423251 CCER2I3L3R5 266 aa24.71■■□□□ 1.55
MCF2L-214ENST00000423251 ZNF784Q8NCA9 323 aaPredicted RBP24.71■■□□□ 1.55
MCF2L-214ENST00000423251 RIPK4P57078 832 aa24.7■■□□□ 1.54
MCF2L-214ENST00000423251 TEFQ10587 303 aa24.7■■□□□ 1.54
MCF2L-214ENST00000423251 PALLDQ8WX93 1383 aa24.69■■□□□ 1.54
MCF2L-214ENST00000423251 MRC1P22897 1456 aa24.69■■□□□ 1.54
MCF2L-214ENST00000423251 MSH5O43196 834 aa24.68■■□□□ 1.54
MCF2L-214ENST00000423251 HMGB2P26583 209 aaKnown RBP24.68■■□□□ 1.54
MCF2L-214ENST00000423251 MCM10Q7L590 875 aa24.68■■□□□ 1.54
MCF2L-214ENST00000423251 GPR162Q16538 588 aa24.67■■□□□ 1.54
MCF2L-214ENST00000423251 COL23A1Q86Y22 540 aaPredicted RBP24.67■■□□□ 1.54
MCF2L-214ENST00000423251 VIRMAQ69YN4 1812 aaKnown RBP24.66■■□□□ 1.54
MCF2L-214ENST00000423251 LMOD3Q0VAK6 560 aa24.66■■□□□ 1.54
MCF2L-214ENST00000423251 DCTN1Q14203 1278 aa24.66■■□□□ 1.54
MCF2L-214ENST00000423251 NLGN2Q8NFZ4 835 aa24.66■■□□□ 1.54
MCF2L-214ENST00000423251 APAF1O14727 1248 aa24.65■■□□□ 1.54
MCF2L-214ENST00000423251 PELP1Q8IZL8 1130 aaKnown RBP24.65■■□□□ 1.54
MCF2L-214ENST00000423251 C4BP0C0L5 1744 aa24.64■■□□□ 1.54
MCF2L-214ENST00000423251 LOC102724428A0A0B4J2F2 783 aa24.64■■□□□ 1.54
MCF2L-214ENST00000423251 SIK1P57059 783 aa24.64■■□□□ 1.54
MCF2L-214ENST00000423251 MSL1Q68DK7 614 aa24.64■■□□□ 1.54
MCF2L-214ENST00000423251 MIER1Q8N108 512 aa24.64■■□□□ 1.54
MCF2L-214ENST00000423251 RRP7AQ9Y3A4 280 aaKnown RBP24.64■■□□□ 1.54
MCF2L-214ENST00000423251 DLG5Q8TDM6 1919 aa24.64■■□□□ 1.53
MCF2L-214ENST00000423251 NEUROD2Q15784 382 aa24.63■■□□□ 1.53
MCF2L-214ENST00000423251 FAM9BQ8IZU0 186 aa24.63■■□□□ 1.53
MCF2L-214ENST00000423251 TAF7Q15545 349 aaPredicted RBP24.62■■□□□ 1.53
MCF2L-214ENST00000423251 GOLGB1Q14789 3259 aaKnown RBP24.62■■□□□ 1.53
MCF2L-214ENST00000423251 SLC39A6Q13433 755 aa24.61■■□□□ 1.53
MCF2L-214ENST00000423251 RBM42Q9BTD8 480 aaKnown RBP24.61■■□□□ 1.53
MCF2L-214ENST00000423251 BTBD11A6QL63 1104 aa24.6■■□□□ 1.53
MCF2L-214ENST00000423251 TRIM35Q9UPQ4 493 aa24.6■■□□□ 1.53
MCF2L-214ENST00000423251 UBR3Q6ZT12 1888 aa24.6■■□□□ 1.53
MCF2L-214ENST00000423251 PTCD1O75127 700 aaKnown RBP24.59■■□□□ 1.53
MCF2L-214ENST00000423251 ATP6V1AP38606 617 aa24.59■■□□□ 1.53
MCF2L-214ENST00000423251 ZNF790Q6PG37 636 aa24.59■■□□□ 1.53
MCF2L-214ENST00000423251 THUMPD2Q9BTF0 503 aaKnown RBP24.59■■□□□ 1.53
MCF2L-214ENST00000423251 NCBP3Q53F19 620 aaKnown RBP24.58■■□□□ 1.53
MCF2L-214ENST00000423251 TTC5Q8N0Z6 440 aa24.58■■□□□ 1.53
MCF2L-214ENST00000423251 SLC4A9Q96Q91 983 aa24.58■■□□□ 1.53
MCF2L-214ENST00000423251 SIPA1L3O60292 1781 aaPredicted RBP24.57■■□□□ 1.52
MCF2L-214ENST00000423251 AMIGO3Q86WK7 504 aa24.56■■□□□ 1.52
MCF2L-214ENST00000423251 ITPK1Q13572 414 aa24.55■■□□□ 1.52
MCF2L-214ENST00000423251 VSIG10Q8N0Z9 540 aa24.55■■□□□ 1.52
MCF2L-214ENST00000423251 AK7Q96M32 723 aa24.55■■□□□ 1.52
MCF2L-214ENST00000423251 BABAM1Q9NWV8 329 aa24.55■■□□□ 1.52
MCF2L-214ENST00000423251 ZNF831Q5JPB2 1677 aa24.54■■□□□ 1.52
MCF2L-214ENST00000423251 YBX3P16989 372 aaKnown RBP eCLIP24.54■■□□□ 1.52
MCF2L-214ENST00000423251 CCDC27Q2M243 656 aa24.53■■□□□ 1.52
MCF2L-214ENST00000423251 SMIM5Q71RC9 77 aa24.53■■□□□ 1.52
MCF2L-214ENST00000423251 FLAD1Q8NFF5 587 aa24.53■■□□□ 1.52
MCF2L-214ENST00000423251 KCNQ3O43525 872 aa24.52■■□□□ 1.52
MCF2L-214ENST00000423251 PHF14O94880 888 aa24.52■■□□□ 1.52
MCF2L-214ENST00000423251 LINC00116Q8NCU8 138 aa24.52■■□□□ 1.52
MCF2L-214ENST00000423251 ZNF496Q96IT1 587 aaPredicted RBP24.52■■□□□ 1.52
MCF2L-214ENST00000423251 FMNL2Q96PY5 1086 aa24.52■■□□□ 1.52
MCF2L-214ENST00000423251 MIS18AQ9NYP9 233 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms